BLASTX nr result

ID: Cimicifuga21_contig00010299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010299
         (1621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g...   488   e-135
ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|2...   483   e-134
ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g...   479   e-133
ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|2...   479   e-132
ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g...   476   e-131

>ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g38610 [Vitis vinifera]
            gi|296085835|emb|CBI31159.3| unnamed protein product
            [Vitis vinifera]
          Length = 281

 Score =  488 bits (1257), Expect = e-135
 Identities = 244/286 (85%), Positives = 260/286 (90%)
 Frame = -1

Query: 1366 MSGSLYTHNFSPARAPSPQIRNAPDAVGGGDSQYLSELLAEHQKLGPFMQVLPICSRLLN 1187
            MSG LY HNFSPARA SPQIR+ PD     DSQYLSELLAEHQKLGPFMQVLPICSRLLN
Sbjct: 1    MSG-LYNHNFSPARAVSPQIRSTPDV----DSQYLSELLAEHQKLGPFMQVLPICSRLLN 55

Query: 1186 QEIIRVSGMVSNPGFGDYDRMHHGSPSPMASSNLMANVGGSSLTGWNNLLQERLGVPQGM 1007
            QEIIRVSGM+SN GFGD+DR+ H SPSPMASSNLM+NV G+ L GWN L QERL  P GM
Sbjct: 56   QEIIRVSGMISNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGLGGWNGLPQERLSGPHGM 115

Query: 1006 TMDWQGAPASPSSYIVKKILRLEIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIR 827
            TMDWQGAPASPSSY VK+ILRLEIPVD+YPNFNFVGRLLGPRGNSLKRVEA+TGCRVYIR
Sbjct: 116  TMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 175

Query: 826  GKGSIKDPGKEEKLRGRPGYEHLNEPLHILVEAELPANIIDTRLRQAQEILEELLKPVDE 647
            GKGSIKDP KE+KLRGRPGYEHLN+PLHIL+EA+LPANI+D RLRQAQEI+EELLKPVDE
Sbjct: 176  GKGSIKDPEKEDKLRGRPGYEHLNDPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDE 235

Query: 646  SQDFYKRQQLRELALLNSNLREESPRPSGSVSPFNSSGMKRAKTGR 509
            SQDF KRQQLRELALLNSN REESP PSGSVSPFN+SGMKRAKTGR
Sbjct: 236  SQDFIKRQQLRELALLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


>ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|222833468|gb|EEE71945.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  483 bits (1242), Expect = e-134
 Identities = 240/286 (83%), Positives = 259/286 (90%)
 Frame = -1

Query: 1366 MSGSLYTHNFSPARAPSPQIRNAPDAVGGGDSQYLSELLAEHQKLGPFMQVLPICSRLLN 1187
            MSG LY  NFSPARA SPQIR+ PD     DSQYLSELLAEHQKLGPFMQVLP CSRLLN
Sbjct: 1    MSG-LYNPNFSPARAASPQIRSTPDV----DSQYLSELLAEHQKLGPFMQVLPTCSRLLN 55

Query: 1186 QEIIRVSGMVSNPGFGDYDRMHHGSPSPMASSNLMANVGGSSLTGWNNLLQERLGVPQGM 1007
            QEI RVSGM+SN GFGD+DR+ H SPSPMASSNL++NVGG+ L+GWN + QERL  P GM
Sbjct: 56   QEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLLSNVGGTGLSGWNGIPQERLSGPPGM 115

Query: 1006 TMDWQGAPASPSSYIVKKILRLEIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIR 827
            TMDWQGAPASPSSY VK+ILRLEIPVD+YPNFNFVGRLLGPRGNSLKRVEA+TGCRVYIR
Sbjct: 116  TMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 175

Query: 826  GKGSIKDPGKEEKLRGRPGYEHLNEPLHILVEAELPANIIDTRLRQAQEILEELLKPVDE 647
            GKGSIKDP KEEKLRGRPGYEHLN+PLHIL+EA+LPANI+D RLRQAQEI+EELLKPVDE
Sbjct: 176  GKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDE 235

Query: 646  SQDFYKRQQLRELALLNSNLREESPRPSGSVSPFNSSGMKRAKTGR 509
            SQDF KRQQLRELA+LNSN REESP PSGSVSPFN+SGMKRAKTGR
Sbjct: 236  SQDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


>ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine max]
          Length = 281

 Score =  479 bits (1233), Expect = e-133
 Identities = 240/286 (83%), Positives = 259/286 (90%)
 Frame = -1

Query: 1366 MSGSLYTHNFSPARAPSPQIRNAPDAVGGGDSQYLSELLAEHQKLGPFMQVLPICSRLLN 1187
            MSG LY  NFSPARA SPQIR+ P+     DSQYLSELLAEHQKLGPFMQVLPICSRLLN
Sbjct: 1    MSG-LYNPNFSPARAASPQIRSNPEV----DSQYLSELLAEHQKLGPFMQVLPICSRLLN 55

Query: 1186 QEIIRVSGMVSNPGFGDYDRMHHGSPSPMASSNLMANVGGSSLTGWNNLLQERLGVPQGM 1007
            QEI+RVSGM+SN GFGD+DR+ H SPSPMASSNLM+NV G+ L GWN+L QERL  P GM
Sbjct: 56   QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGM 115

Query: 1006 TMDWQGAPASPSSYIVKKILRLEIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIR 827
            TMDWQ APASPSS+ VK+ILRLEIPVD+YPNFNFVGRLLGPRGNSLKRVEA+TGCRVYIR
Sbjct: 116  TMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 175

Query: 826  GKGSIKDPGKEEKLRGRPGYEHLNEPLHILVEAELPANIIDTRLRQAQEILEELLKPVDE 647
            GKGSIKDP KEEKLRGRPGYEHLNEPLHIL+EAELPAN++D RLRQAQEI+EELLKPVDE
Sbjct: 176  GKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEAELPANVVDIRLRQAQEIIEELLKPVDE 235

Query: 646  SQDFYKRQQLRELALLNSNLREESPRPSGSVSPFNSSGMKRAKTGR 509
            SQD+ KRQQLRELA+LNSN REESP PSGSVSPFNSSGMKRAKTGR
Sbjct: 236  SQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 281


>ref|XP_002323686.1| predicted protein [Populus trichocarpa] gi|222868316|gb|EEF05447.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  479 bits (1232), Expect = e-132
 Identities = 238/286 (83%), Positives = 259/286 (90%)
 Frame = -1

Query: 1366 MSGSLYTHNFSPARAPSPQIRNAPDAVGGGDSQYLSELLAEHQKLGPFMQVLPICSRLLN 1187
            MSG LY  +FSPARA SPQIR+ PD     DSQYLSELLAEHQKLGPFMQ+LPICSRLLN
Sbjct: 1    MSG-LYNPSFSPARAASPQIRSTPDV----DSQYLSELLAEHQKLGPFMQILPICSRLLN 55

Query: 1186 QEIIRVSGMVSNPGFGDYDRMHHGSPSPMASSNLMANVGGSSLTGWNNLLQERLGVPQGM 1007
            QEI RVSGM+SN GFGD+DR+ H SPSPMASSNL++NVGG+ L GWN L QERL  P GM
Sbjct: 56   QEIFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLISNVGGTGLGGWNGLPQERLSGPPGM 115

Query: 1006 TMDWQGAPASPSSYIVKKILRLEIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIR 827
            TMDWQGAPASPSS+ VK+ILRLEIPVD+YPNFNFVGRLLGPRGNSLKRVEA+TGCRVYIR
Sbjct: 116  TMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 175

Query: 826  GKGSIKDPGKEEKLRGRPGYEHLNEPLHILVEAELPANIIDTRLRQAQEILEELLKPVDE 647
            GKGSIKDP KEEKL+GRPGYEHLN+PLHIL+EA+LPANI+D RLRQAQEI+EELLKPVDE
Sbjct: 176  GKGSIKDPDKEEKLKGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDE 235

Query: 646  SQDFYKRQQLRELALLNSNLREESPRPSGSVSPFNSSGMKRAKTGR 509
            SQDF KRQQLRELA+LNSN REESP PSGSVSPFN+SGMKRAKTGR
Sbjct: 236  SQDFIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRAKTGR 281


>ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine max]
          Length = 281

 Score =  476 bits (1224), Expect = e-131
 Identities = 239/286 (83%), Positives = 258/286 (90%)
 Frame = -1

Query: 1366 MSGSLYTHNFSPARAPSPQIRNAPDAVGGGDSQYLSELLAEHQKLGPFMQVLPICSRLLN 1187
            MSG LY  NFSPARA SPQIR+ P+     DSQYLSELLAEHQKLGPFMQVLPICSRLLN
Sbjct: 1    MSG-LYNPNFSPARAASPQIRSNPEV----DSQYLSELLAEHQKLGPFMQVLPICSRLLN 55

Query: 1186 QEIIRVSGMVSNPGFGDYDRMHHGSPSPMASSNLMANVGGSSLTGWNNLLQERLGVPQGM 1007
            QEI+RVSGM+SN GFGD+DR+ H SPSPMASSNLM+NV G+ L GWN+L QERL    GM
Sbjct: 56   QEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGM 115

Query: 1006 TMDWQGAPASPSSYIVKKILRLEIPVDSYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIR 827
            TMDWQ APASPSS+ VK+ILRLEIPVD+YPNFNFVGRLLGPRGNSLKRVEA+TGCRVYIR
Sbjct: 116  TMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 175

Query: 826  GKGSIKDPGKEEKLRGRPGYEHLNEPLHILVEAELPANIIDTRLRQAQEILEELLKPVDE 647
            GKGSIKDP KEEKLRGRPGYEHLNEPLHIL+EA+LPAN++D RLRQAQEI+EELLKPVDE
Sbjct: 176  GKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDE 235

Query: 646  SQDFYKRQQLRELALLNSNLREESPRPSGSVSPFNSSGMKRAKTGR 509
            SQD+ KRQQLRELALLNSN REESP PSGSVSPFNSSGMKRAKTGR
Sbjct: 236  SQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 281


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