BLASTX nr result
ID: Cimicifuga21_contig00010287
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00010287 (941 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR18062.1| unknown [Picea sitchensis] 259 5e-67 ref|XP_002523079.1| arginine/serine-rich splicing factor, putati... 258 2e-66 ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|2... 256 5e-66 emb|CBI39508.3| unnamed protein product [Vitis vinifera] 254 2e-65 ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 254 2e-65 >gb|ABR18062.1| unknown [Picea sitchensis] Length = 331 Score = 259 bits (663), Expect = 5e-67 Identities = 128/166 (77%), Positives = 138/166 (83%), Gaps = 2/166 (1%) Frame = -1 Query: 941 VEDLFYKYGPIVEIDLKIPPRPPGYAFVEFEDSHDAEDAIRGRDGYSFDGHRLRVELAHG 762 VEDLFYKYGPIV+IDLKIPPRPPGY F+EFED+ DAEDAIRGRDGY+FDG+RLRVELAHG Sbjct: 23 VEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGNRLRVELAHG 82 Query: 761 GRGQXXXXXXXXXXXXXXXXXXXXXXD--YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 588 GRGQ YRVLV+GLPSSASWQDLKDHMRRAGDVCFSQ Sbjct: 83 GRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQ 142 Query: 587 VFRASSGTTGIVDYTNYEDMRYAIRKLNDSEFRNSFSRGYIRVKEY 450 VFR SSGTTGIVDYTNY+DM+YAIRKL+DSEFRN+FSRGYIRVKEY Sbjct: 143 VFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEY 188 >ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis] gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis] Length = 292 Score = 258 bits (658), Expect = 2e-66 Identities = 124/165 (75%), Positives = 135/165 (81%) Frame = -1 Query: 941 VEDLFYKYGPIVEIDLKIPPRPPGYAFVEFEDSHDAEDAIRGRDGYSFDGHRLRVELAHG 762 VEDLFYKYGPI IDLKIPPRPPGYAFVEFE++ DAEDAIRGRDGY FDGH+LRVELAHG Sbjct: 23 VEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHQLRVELAHG 82 Query: 761 GRGQXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 582 GRG +YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF Sbjct: 83 GRGHSSSDRHSSHSGGGRGRGVSRRSEYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 142 Query: 581 RASSGTTGIVDYTNYEDMRYAIRKLNDSEFRNSFSRGYIRVKEYE 447 R SGTTGIVDYTNYEDM++AI+KL+DSEFRN+FSR Y+RVKEY+ Sbjct: 143 RDGSGTTGIVDYTNYEDMKHAIKKLDDSEFRNAFSRAYVRVKEYD 187 >ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa] Length = 252 Score = 256 bits (654), Expect = 5e-66 Identities = 121/165 (73%), Positives = 135/165 (81%) Frame = -1 Query: 941 VEDLFYKYGPIVEIDLKIPPRPPGYAFVEFEDSHDAEDAIRGRDGYSFDGHRLRVELAHG 762 VEDLFYKYGP+ IDLKIPPRPPGYAFVEFE++ DAEDAIRGRDGY FDGHRLRVELAHG Sbjct: 23 VEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAHG 82 Query: 761 GRGQXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 582 GRG +YRV+VTGLPSSASWQDLKDHMRRAGDVCFSQVF Sbjct: 83 GRGHSSSDRHSSYSGGRGRGGASRRSEYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVF 142 Query: 581 RASSGTTGIVDYTNYEDMRYAIRKLNDSEFRNSFSRGYIRVKEYE 447 R SGTTGIVDYTNYEDM+YAI+K++DSEFRN+FS+ Y+RV+EY+ Sbjct: 143 RDGSGTTGIVDYTNYEDMKYAIKKIDDSEFRNAFSQAYVRVREYD 187 >emb|CBI39508.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 254 bits (650), Expect = 2e-65 Identities = 124/165 (75%), Positives = 133/165 (80%) Frame = -1 Query: 941 VEDLFYKYGPIVEIDLKIPPRPPGYAFVEFEDSHDAEDAIRGRDGYSFDGHRLRVELAHG 762 VEDLFYKYGPIV+IDLKIPPRPPGYAFVEFED+ DAEDAI GRDGY+FDGHRLRVELAHG Sbjct: 23 VEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHG 82 Query: 761 GRGQXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 582 GRGQ +YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVF Sbjct: 83 GRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVF 142 Query: 581 RASSGTTGIVDYTNYEDMRYAIRKLNDSEFRNSFSRGYIRVKEYE 447 R G TGIVDYTNY+DM+YAIRKL+DS F+N FSR YIRV+EYE Sbjct: 143 RGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187 >ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera] Length = 288 Score = 254 bits (650), Expect = 2e-65 Identities = 124/165 (75%), Positives = 133/165 (80%) Frame = -1 Query: 941 VEDLFYKYGPIVEIDLKIPPRPPGYAFVEFEDSHDAEDAIRGRDGYSFDGHRLRVELAHG 762 VEDLFYKYGPIV+IDLKIPPRPPGYAFVEFED+ DAEDAI GRDGY+FDGHRLRVELAHG Sbjct: 23 VEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHG 82 Query: 761 GRGQXXXXXXXXXXXXXXXXXXXXXXDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 582 GRGQ +YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVF Sbjct: 83 GRGQSSSVDHYSSYSSSSRGGLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVF 142 Query: 581 RASSGTTGIVDYTNYEDMRYAIRKLNDSEFRNSFSRGYIRVKEYE 447 R G TGIVDYTNY+DM+YAIRKL+DS F+N FSR YIRV+EYE Sbjct: 143 RGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187