BLASTX nr result

ID: Cimicifuga21_contig00010262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010262
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526656.1| importin beta-1, putative [Ricinus communis]...    59   4e-07
ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vi...    57   2e-06
ref|XP_002309153.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002526656.1| importin beta-1, putative [Ricinus communis]
           gi|223533956|gb|EEF35678.1| importin beta-1, putative
           [Ricinus communis]
          Length = 872

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/59 (59%), Positives = 37/59 (62%), Gaps = 9/59 (15%)
 Frame = +2

Query: 113 GFKNSKAELMWPHGSHLLQLIEVVCRDEQRVGGSVTK---------ADTLGPNVKILFK 262
           GFKNSK E+M PH  HLLQ IE+V RD QR   SVTK         AD LG N KILFK
Sbjct: 778 GFKNSKPEVMLPHAGHLLQFIEMVFRDSQR-DESVTKAAVAVMGDLADALGSNTKILFK 835


>ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vinifera]
           gi|297735635|emb|CBI18129.3| unnamed protein product
           [Vitis vinifera]
          Length = 872

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/59 (59%), Positives = 37/59 (62%), Gaps = 9/59 (15%)
 Frame = +2

Query: 113 GFKNSKAELMWPHGSHLLQLIEVVCRDEQRVGGSVTK---------ADTLGPNVKILFK 262
           GFKNSK ELM PH   LLQ IE+V RD  R   SVTK         ADTLG N+KILFK
Sbjct: 778 GFKNSKPELMLPHAEKLLQFIELVSRDRHR-EESVTKAAVAVMGDLADTLGSNMKILFK 835


>ref|XP_002309153.1| predicted protein [Populus trichocarpa] gi|222855129|gb|EEE92676.1|
           predicted protein [Populus trichocarpa]
          Length = 870

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/59 (55%), Positives = 37/59 (62%), Gaps = 9/59 (15%)
 Frame = +2

Query: 113 GFKNSKAELMWPHGSHLLQLIEVVCRDEQRVGGSVTK---------ADTLGPNVKILFK 262
           GFK+SK ELM PH  HL Q IE+V R++ R   SVTK         AD LGPN KILFK
Sbjct: 777 GFKDSKPELMLPHAGHLFQFIELVFREKYR-DESVTKAAVAVMGDLADALGPNTKILFK 834


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