BLASTX nr result
ID: Cimicifuga21_contig00010262
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00010262 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526656.1| importin beta-1, putative [Ricinus communis]... 59 4e-07 ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vi... 57 2e-06 ref|XP_002309153.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >ref|XP_002526656.1| importin beta-1, putative [Ricinus communis] gi|223533956|gb|EEF35678.1| importin beta-1, putative [Ricinus communis] Length = 872 Score = 58.9 bits (141), Expect = 4e-07 Identities = 35/59 (59%), Positives = 37/59 (62%), Gaps = 9/59 (15%) Frame = +2 Query: 113 GFKNSKAELMWPHGSHLLQLIEVVCRDEQRVGGSVTK---------ADTLGPNVKILFK 262 GFKNSK E+M PH HLLQ IE+V RD QR SVTK AD LG N KILFK Sbjct: 778 GFKNSKPEVMLPHAGHLLQFIEMVFRDSQR-DESVTKAAVAVMGDLADALGSNTKILFK 835 >ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vinifera] gi|297735635|emb|CBI18129.3| unnamed protein product [Vitis vinifera] Length = 872 Score = 57.0 bits (136), Expect = 2e-06 Identities = 35/59 (59%), Positives = 37/59 (62%), Gaps = 9/59 (15%) Frame = +2 Query: 113 GFKNSKAELMWPHGSHLLQLIEVVCRDEQRVGGSVTK---------ADTLGPNVKILFK 262 GFKNSK ELM PH LLQ IE+V RD R SVTK ADTLG N+KILFK Sbjct: 778 GFKNSKPELMLPHAEKLLQFIELVSRDRHR-EESVTKAAVAVMGDLADTLGSNMKILFK 835 >ref|XP_002309153.1| predicted protein [Populus trichocarpa] gi|222855129|gb|EEE92676.1| predicted protein [Populus trichocarpa] Length = 870 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/59 (55%), Positives = 37/59 (62%), Gaps = 9/59 (15%) Frame = +2 Query: 113 GFKNSKAELMWPHGSHLLQLIEVVCRDEQRVGGSVTK---------ADTLGPNVKILFK 262 GFK+SK ELM PH HL Q IE+V R++ R SVTK AD LGPN KILFK Sbjct: 777 GFKDSKPELMLPHAGHLFQFIELVFREKYR-DESVTKAAVAVMGDLADALGPNTKILFK 834