BLASTX nr result

ID: Cimicifuga21_contig00010249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010249
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37566.1| unknown [Lotus japonicus]                              210   4e-52
ref|XP_002282626.1| PREDICTED: iron-sulfur assembly protein IscA...   209   6e-52
ref|XP_003625821.1| Iron-sulfur assembly protein IscA-like prote...   202   9e-50
gb|AFK44744.1| unknown [Lotus japonicus]                              202   1e-49
ref|XP_002308154.1| predicted protein [Populus trichocarpa] gi|1...   199   6e-49

>gb|AFK37566.1| unknown [Lotus japonicus]
          Length = 161

 Score =  210 bits (534), Expect = 4e-52
 Identities = 107/150 (71%), Positives = 120/150 (80%), Gaps = 5/150 (3%)
 Frame = +1

Query: 205 APFITNRIRENYRLLS-----SSSALHNQEVSSTQDTAQDPVRMTDNCIRRLKELREKEA 369
           AP +  R R+N +L S     SSS LH+   SS+  +  +PV MT+NC+RR+KEL   E+
Sbjct: 11  APSLAARFRQNQKLTSFSSSSSSSVLHDATTSSSSSSHVEPVHMTENCLRRMKELEASES 70

Query: 370 TTEGKMLRLSVETGGCSGFQYAFLLDDKTNSDDRVFENEGVKLVVDNISYDFVKGATVDY 549
            T  K LRLSVETGGCSGFQYAF LDD+ NSDDRVFE EG+KLVVDNISYDFVKGATVDY
Sbjct: 71  ATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDY 130

Query: 550 VEELIRSAFVVTENPSAVGGCSCKSSFMVK 639
           VEELIRSAFVVTENPSAVGGCSCKSSFMVK
Sbjct: 131 VEELIRSAFVVTENPSAVGGCSCKSSFMVK 160


>ref|XP_002282626.1| PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial
           [Vitis vinifera] gi|297740113|emb|CBI30295.3| unnamed
           protein product [Vitis vinifera]
          Length = 154

 Score =  209 bits (533), Expect = 6e-52
 Identities = 104/143 (72%), Positives = 122/143 (85%)
 Frame = +1

Query: 211 FITNRIRENYRLLSSSSALHNQEVSSTQDTAQDPVRMTDNCIRRLKELREKEATTEGKML 390
           FI  RIR+N  LL ++SALH+   S +Q  + D ++MTDNC++R+KEL+  EA+ + KML
Sbjct: 12  FIAARIRQNQALLLTTSALHHSP-SPSQSPSLDAIQMTDNCVQRIKELQTNEASMKDKML 70

Query: 391 RLSVETGGCSGFQYAFLLDDKTNSDDRVFENEGVKLVVDNISYDFVKGATVDYVEELIRS 570
           RLSVETGGCSGFQY FLLDDKTNSDDR+FE +GVKLVVD ISYDFVKGATVDYVEELIRS
Sbjct: 71  RLSVETGGCSGFQYVFLLDDKTNSDDRIFERDGVKLVVDKISYDFVKGATVDYVEELIRS 130

Query: 571 AFVVTENPSAVGGCSCKSSFMVK 639
           AF+V+ NPSAVGGCSCKSSFMVK
Sbjct: 131 AFLVSTNPSAVGGCSCKSSFMVK 153


>ref|XP_003625821.1| Iron-sulfur assembly protein IscA-like protein [Medicago
           truncatula] gi|355500836|gb|AES82039.1| Iron-sulfur
           assembly protein IscA-like protein [Medicago truncatula]
           gi|388506884|gb|AFK41508.1| unknown [Medicago
           truncatula]
          Length = 160

 Score =  202 bits (514), Expect = 9e-50
 Identities = 103/151 (68%), Positives = 120/151 (79%), Gaps = 6/151 (3%)
 Frame = +1

Query: 205 APFITNRIRENYRLLSS------SSALHNQEVSSTQDTAQDPVRMTDNCIRRLKELREKE 366
           AP +  R + N  ++SS      SS LH+   SS      +PV +T+NC+R++KEL   E
Sbjct: 10  APLLAARFQRNQNIISSFSSSSSSSVLHHA-TSSPSSPDVEPVHITENCVRKMKELDANE 68

Query: 367 ATTEGKMLRLSVETGGCSGFQYAFLLDDKTNSDDRVFENEGVKLVVDNISYDFVKGATVD 546
           +++ GKMLRLSVETGGCSGFQYAF LDD+ NSDDRVFE EG+KLVVDNISYDFVKGATVD
Sbjct: 69  SSSGGKMLRLSVETGGCSGFQYAFNLDDRFNSDDRVFEKEGIKLVVDNISYDFVKGATVD 128

Query: 547 YVEELIRSAFVVTENPSAVGGCSCKSSFMVK 639
           YVEELIRSAF+VTENPSAVGGCSCKSSFMVK
Sbjct: 129 YVEELIRSAFIVTENPSAVGGCSCKSSFMVK 159


>gb|AFK44744.1| unknown [Lotus japonicus]
          Length = 153

 Score =  202 bits (513), Expect = 1e-49
 Identities = 106/149 (71%), Positives = 121/149 (81%), Gaps = 4/149 (2%)
 Frame = +1

Query: 205 APFITNRIRENYRLL---SSSSALHNQEVSSTQDTAQDPVRMTDNCIRRLKELREKEATT 375
           AP +  R R+N R L   SSSS LH+    +T  +  +PV +T+NC+RR+KEL   E+TT
Sbjct: 8   APSLAARFRQNERFLNFSSSSSVLHH----ATSSSYVEPVHITENCVRRMKELEASESTT 63

Query: 376 EGKMLRLSVETGGCSGFQYAFLLDDKT-NSDDRVFENEGVKLVVDNISYDFVKGATVDYV 552
             KMLRLSVETGGCSGFQYAF LDD + NSDDRVFE EG+KLVVD++SYDFVKGATVDYV
Sbjct: 64  SRKMLRLSVETGGCSGFQYAFDLDDDSVNSDDRVFEKEGIKLVVDSVSYDFVKGATVDYV 123

Query: 553 EELIRSAFVVTENPSAVGGCSCKSSFMVK 639
           EELIRSAFVVTENPSAVGGCSCKSSFMVK
Sbjct: 124 EELIRSAFVVTENPSAVGGCSCKSSFMVK 152


>ref|XP_002308154.1| predicted protein [Populus trichocarpa] gi|118489149|gb|ABK96381.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222854130|gb|EEE91677.1| predicted protein [Populus
           trichocarpa]
          Length = 153

 Score =  199 bits (507), Expect = 6e-49
 Identities = 102/144 (70%), Positives = 117/144 (81%)
 Frame = +1

Query: 208 PFITNRIRENYRLLSSSSALHNQEVSSTQDTAQDPVRMTDNCIRRLKELREKEATTEGKM 387
           P  T+ IR+N+RLLSSS+    +E S+  D   D + +TDNCIRRLKEL+  E + + KM
Sbjct: 15  PLFTSWIRQNHRLLSSSAL---REASTLVD---DSIHLTDNCIRRLKELQTSEGSAKDKM 68

Query: 388 LRLSVETGGCSGFQYAFLLDDKTNSDDRVFENEGVKLVVDNISYDFVKGATVDYVEELIR 567
           LRL VETGGCSGFQY F LDDKTN DDRVFE EGV+LVVDNISYDF+KGATVDYVEELIR
Sbjct: 69  LRLGVETGGCSGFQYVFDLDDKTNPDDRVFETEGVRLVVDNISYDFLKGATVDYVEELIR 128

Query: 568 SAFVVTENPSAVGGCSCKSSFMVK 639
           +AF+V  NPSAVGGCSCKSSFMVK
Sbjct: 129 AAFIVATNPSAVGGCSCKSSFMVK 152


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