BLASTX nr result

ID: Cimicifuga21_contig00010216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010216
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250...   363   4e-98
emb|CBI31954.3| unnamed protein product [Vitis vinifera]              338   2e-90
ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256...   338   2e-90
ref|XP_002514758.1| membrane associated ring finger 1,8, putativ...   330   4e-88
ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...   326   9e-87

>ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera]
           gi|297733975|emb|CBI15222.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  363 bits (933), Expect = 4e-98
 Identities = 189/292 (64%), Positives = 208/292 (71%), Gaps = 8/292 (2%)
 Frame = +3

Query: 147 MGDNVVLIVDHLITPT--QSIQGDDAXXXXXXXXXXXXXXXXXXXXN-----GVEESEVP 305
           MGD++VL VD LI P   QS+QG +                     +     G+EE   P
Sbjct: 1   MGDHLVLCVDRLIKPQTLQSLQGTEVSGSSEGGDEGSCSHTVDPSTSALEDKGLEEHHGP 60

Query: 306 DEEQPLLQAVECRICQEEDTIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHEL 485
           +EE+PL+Q VECRICQEED+IKNLE PCACSGSLKFAHRKCVQRWCNEKGD TCEICH+ 
Sbjct: 61  EEEEPLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDVTCEICHQP 120

Query: 486 YQPGYTA-PPPVPQDTTIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEAEYDEYAATN 662
           YQPGYTA PPP  +D TIDISEGWTISGTPLDL+DPRLLAMAAAERHF+EAEY+EYA TN
Sbjct: 121 YQPGYTAPPPPQSEDATIDISEGWTISGTPLDLNDPRLLAMAAAERHFLEAEYEEYADTN 180

Query: 663 ASGAAFCRSXXXXXXXXXXXXXXXNITNADGDGDDDASTFFSLFLLRAAGFLLPCYIMAW 842
           ASGAAFCRS               NITNA  DGDDDAS FFSLFLLRAAGFLLPCYIMAW
Sbjct: 181 ASGAAFCRSAALILMALLLLRHALNITNA--DGDDDASNFFSLFLLRAAGFLLPCYIMAW 238

Query: 843 AISIXXXXXXXXXXXXXXXXTEVAFLIQSGQRGGLQFTIAPAPASTPRQEPV 998
           AISI                TEVAF++Q+GQ  GLQFTIAP PA TP QEP+
Sbjct: 239 AISILQRRRQRQEAAAALAATEVAFMLQAGQHRGLQFTIAPGPAVTPHQEPL 290


>emb|CBI31954.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  338 bits (866), Expect = 2e-90
 Identities = 177/287 (61%), Positives = 199/287 (69%), Gaps = 4/287 (1%)
 Frame = +3

Query: 147  MGDNVVLIVDHLITP--TQSIQGDDAXXXXXXXXXXXXXXXXXXXXNGVEESEVPDEEQP 320
            M D++VL VD  I P  +QS+Q   A                      VEE+E  +EE+P
Sbjct: 313  MSDHLVLYVDRPIRPVTSQSVQEAGAETAGPSTSVADDKR--------VEENEGSNEEEP 364

Query: 321  LLQAVECRICQEEDTIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHELYQPGY 500
             L+ +ECRICQEED+++NLETPCACSGSLK+AHRKCVQRWCNEKGD  CEICH+ YQPGY
Sbjct: 365  FLKMMECRICQEEDSLENLETPCACSGSLKYAHRKCVQRWCNEKGDIICEICHQPYQPGY 424

Query: 501  TAPPPVP--QDTTIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEAEYDEYAATNASGA 674
            TAPPP P  +DT IDI  GWTISGTPLDL DPRLLAMA AERHF+EAEYDEY ATNA+GA
Sbjct: 425  TAPPPPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNATGA 484

Query: 675  AFCRSXXXXXXXXXXXXXXXNITNADGDGDDDASTFFSLFLLRAAGFLLPCYIMAWAISI 854
            AFCRS                IT+AD DGDDD STFFSLFLLRAAGFLLPCYIMAWAISI
Sbjct: 485  AFCRSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISI 544

Query: 855  XXXXXXXXXXXXXXXXTEVAFLIQSGQRGGLQFTIAPAPASTPRQEP 995
                            T+VAF++QSGQR GLQFT+APA    P QEP
Sbjct: 545  -LQRRRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQEP 590


>ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256824 [Vitis vinifera]
           gi|147785386|emb|CAN70908.1| hypothetical protein
           VITISV_040117 [Vitis vinifera]
          Length = 279

 Score =  338 bits (866), Expect = 2e-90
 Identities = 177/287 (61%), Positives = 199/287 (69%), Gaps = 4/287 (1%)
 Frame = +3

Query: 147 MGDNVVLIVDHLITP--TQSIQGDDAXXXXXXXXXXXXXXXXXXXXNGVEESEVPDEEQP 320
           M D++VL VD  I P  +QS+Q   A                      VEE+E  +EE+P
Sbjct: 1   MSDHLVLYVDRPIRPVTSQSVQEAGAETAGPSTSVADDKR--------VEENEGSNEEEP 52

Query: 321 LLQAVECRICQEEDTIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHELYQPGY 500
            L+ +ECRICQEED+++NLETPCACSGSLK+AHRKCVQRWCNEKGD  CEICH+ YQPGY
Sbjct: 53  FLKMMECRICQEEDSLENLETPCACSGSLKYAHRKCVQRWCNEKGDIICEICHQPYQPGY 112

Query: 501 TAPPPVP--QDTTIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEAEYDEYAATNASGA 674
           TAPPP P  +DT IDI  GWTISGTPLDL DPRLLAMA AERHF+EAEYDEY ATNA+GA
Sbjct: 113 TAPPPPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNATGA 172

Query: 675 AFCRSXXXXXXXXXXXXXXXNITNADGDGDDDASTFFSLFLLRAAGFLLPCYIMAWAISI 854
           AFCRS                IT+AD DGDDD STFFSLFLLRAAGFLLPCYIMAWAISI
Sbjct: 173 AFCRSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISI 232

Query: 855 XXXXXXXXXXXXXXXXTEVAFLIQSGQRGGLQFTIAPAPASTPRQEP 995
                           T+VAF++QSGQR GLQFT+APA    P QEP
Sbjct: 233 -LQRRRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQEP 278


>ref|XP_002514758.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223546362|gb|EEF47864.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 292

 Score =  330 bits (847), Expect = 4e-88
 Identities = 176/296 (59%), Positives = 202/296 (68%), Gaps = 12/296 (4%)
 Frame = +3

Query: 147 MGDNVVLIVDHLITPTQSIQG-----DDAXXXXXXXXXXXXXXXXXXXXNGVEESEVPDE 311
           M D +VL  D LITP +S+Q      +                       G  E  V +E
Sbjct: 1   MSDQLVLCADRLITP-ESLQSMEKAKEPGSSGECSSSHTADLPTCVIDVEGGGEHGVSEE 59

Query: 312 EQPLLQAVECRICQEEDTIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHELYQ 491
           E+PLLQ +ECRICQEED+I NLE PCACSGSLKFAHRKCVQRWCNEKGD TCEICH+ YQ
Sbjct: 60  EEPLLQTMECRICQEEDSINNLEAPCACSGSLKFAHRKCVQRWCNEKGDITCEICHQPYQ 119

Query: 492 PGYTAPPPVP-QDTTIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEAEYDEYAATNAS 668
           P YTA PP+P +DT IDISEGWTI+GTPLDLHDPR+LAMAAAERHF+EAEYDEYA ++AS
Sbjct: 120 PNYTASPPLPLEDTAIDISEGWTIAGTPLDLHDPRILAMAAAERHFLEAEYDEYADSSAS 179

Query: 669 GAAFCRSXXXXXXXXXXXXXXXNITNADGDGDDDASTFFSLFLLRAAGFLLPCYIMAWAI 848
           GAAFCRS               ++T   GD D+DASTFFSLFL+RAAGFLLPCYIMAWAI
Sbjct: 180 GAAFCRSAALILMALLLLRHAMSLT---GDSDEDASTFFSLFLIRAAGFLLPCYIMAWAI 236

Query: 849 SIXXXXXXXXXXXXXXXXTEVAFLIQSGQRGGLQFTIAPA------PASTPRQEPV 998
           SI                TEVAF++Q+GQR GLQFTIAP        A+TP+QEP+
Sbjct: 237 SI-LQRRRQRQEAAALAATEVAFMLQAGQRRGLQFTIAPGLAVNPHQAATPQQEPL 291


>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223538320|gb|EEF39927.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 283

 Score =  326 bits (835), Expect = 9e-87
 Identities = 170/286 (59%), Positives = 190/286 (66%), Gaps = 2/286 (0%)
 Frame = +3

Query: 147 MGDNVVLIVDHLITPTQSIQGDDAXXXXXXXXXXXXXXXXXXXXNGVEESEVPDEEQPLL 326
           M D+VVL VD LITP+ S   + A                          +  +EE+PL+
Sbjct: 1   MSDHVVLYVDRLITPSSSSPEEVADRAVAGPSCSRPNEEPNGVVQEKGNDDNDNEEEPLI 60

Query: 327 QAVECRICQEEDTIKNLETPCACSGSLKFAHRKCVQRWCNEKGDTTCEICHELYQPGYTA 506
           +  ECRICQEED++ NLETPCACSGSLK+AHRKCVQ WCNEKGD TCEICH+ YQPGYTA
Sbjct: 61  KVAECRICQEEDSVTNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHKPYQPGYTA 120

Query: 507 P--PPVPQDTTIDISEGWTISGTPLDLHDPRLLAMAAAERHFMEAEYDEYAATNASGAAF 680
           P  PP  +DT IDI  GWTISGTPLDL DPRLLA+A AERHF+EAEYDEYAA+NASGAAF
Sbjct: 121 PLRPPQAEDTAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEAEYDEYAASNASGAAF 180

Query: 681 CRSXXXXXXXXXXXXXXXNITNADGDGDDDASTFFSLFLLRAAGFLLPCYIMAWAISIXX 860
           CRS                +T  D DGDDD STFFSLFLLRAAGFLLPCYIMAWAISI  
Sbjct: 181 CRSAALILMALLLLRHALTVT--DADGDDDVSTFFSLFLLRAAGFLLPCYIMAWAISI-L 237

Query: 861 XXXXXXXXXXXXXXTEVAFLIQSGQRGGLQFTIAPAPASTPRQEPV 998
                         T+VAF++QSGQ  GL FTIA  P  T  QEPV
Sbjct: 238 QRRRQRQEAAALAATQVAFVLQSGQHRGLHFTIASGPQVTAHQEPV 283


Top