BLASTX nr result

ID: Cimicifuga21_contig00010208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010208
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   385   e-105
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   381   e-104
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              381   e-104
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]   381   e-104
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   380   e-103

>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  385 bits (990), Expect = e-105
 Identities = 194/221 (87%), Positives = 209/221 (94%)
 Frame = +3

Query: 3    LFRAPMSFYDSTPLGRILTRVSSDLSIVDLDVPFSFIFSVGATINTYSNLGVLAVVTWQV 182
            LFRAPMSFYDSTPLGRIL+RVSSDLSIVDLDVPFS IF++GAT N YSNLGVLAVVTWQV
Sbjct: 997  LFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFSLIFAIGATTNAYSNLGVLAVVTWQV 1056

Query: 183  LFVSIPMVYLAIWLQRYYFASAKELMRINGTTKSMLANHLAESIAGGMTIRAFEKEDRFF 362
            LFVSIPM+ LAI LQRYYFASAKELMRINGTTKS++ANHLAES+AG MTIRAF +E+RFF
Sbjct: 1057 LFVSIPMIILAIRLQRYYFASAKELMRINGTTKSLVANHLAESVAGAMTIRAFGEEERFF 1116

Query: 363  AQNLDLIDTNASPFFHNFAANEWLIQRLEILSATVISSSALVMVLLPTGTFSPGFIGMAF 542
            A+NLDLIDTNASPFFH+FAANEWLIQRLE LSATV++S+AL MVLLP GTFS GFIGMA 
Sbjct: 1117 AKNLDLIDTNASPFFHSFAANEWLIQRLETLSATVLASAALCMVLLPPGTFSSGFIGMAL 1176

Query: 543  SYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAP 665
            SYGLSLNMSLVFSIQNQCT+ANYIISVERLNQYMHIPSEAP
Sbjct: 1177 SYGLSLNMSLVFSIQNQCTIANYIISVERLNQYMHIPSEAP 1217


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  381 bits (978), Expect = e-104
 Identities = 189/221 (85%), Positives = 207/221 (93%)
 Frame = +3

Query: 3    LFRAPMSFYDSTPLGRILTRVSSDLSIVDLDVPFSFIFSVGATINTYSNLGVLAVVTWQV 182
            LFRAPMSFYDSTPLGRIL+R+S+DLSIVDLDVPFSF+F+ GAT N YSNLGVLAVVTWQV
Sbjct: 1048 LFRAPMSFYDSTPLGRILSRISNDLSIVDLDVPFSFVFAFGATTNAYSNLGVLAVVTWQV 1107

Query: 183  LFVSIPMVYLAIWLQRYYFASAKELMRINGTTKSMLANHLAESIAGGMTIRAFEKEDRFF 362
            LFVSIPM+Y+AI LQRYYFASAKELMRINGTTKS++ANHLAESIAG MTIRAFE+E+RFF
Sbjct: 1108 LFVSIPMIYVAIRLQRYYFASAKELMRINGTTKSLVANHLAESIAGAMTIRAFEEEERFF 1167

Query: 363  AQNLDLIDTNASPFFHNFAANEWLIQRLEILSATVISSSALVMVLLPTGTFSPGFIGMAF 542
             +N+D IDTNASPFFH+FAANEWLIQRLE LSA V+SSSAL M+LLP GTF+ GFIGMA 
Sbjct: 1168 VKNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSALCMILLPPGTFTAGFIGMAM 1227

Query: 543  SYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAP 665
            SYGLSLN+SLVFSIQNQC LANYIISVERLNQYMHIPSEAP
Sbjct: 1228 SYGLSLNVSLVFSIQNQCILANYIISVERLNQYMHIPSEAP 1268


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  381 bits (978), Expect = e-104
 Identities = 189/221 (85%), Positives = 207/221 (93%)
 Frame = +3

Query: 3    LFRAPMSFYDSTPLGRILTRVSSDLSIVDLDVPFSFIFSVGATINTYSNLGVLAVVTWQV 182
            LFRAPMSFYDSTPLGRIL+R+S+DLSIVDLDVPFSF+F+ GAT N YSNLGVLAVVTWQV
Sbjct: 911  LFRAPMSFYDSTPLGRILSRISNDLSIVDLDVPFSFVFAFGATTNAYSNLGVLAVVTWQV 970

Query: 183  LFVSIPMVYLAIWLQRYYFASAKELMRINGTTKSMLANHLAESIAGGMTIRAFEKEDRFF 362
            LFVSIPM+Y+AI LQRYYFASAKELMRINGTTKS++ANHLAESIAG MTIRAFE+E+RFF
Sbjct: 971  LFVSIPMIYVAIRLQRYYFASAKELMRINGTTKSLVANHLAESIAGAMTIRAFEEEERFF 1030

Query: 363  AQNLDLIDTNASPFFHNFAANEWLIQRLEILSATVISSSALVMVLLPTGTFSPGFIGMAF 542
             +N+D IDTNASPFFH+FAANEWLIQRLE LSA V+SSSAL M+LLP GTF+ GFIGMA 
Sbjct: 1031 VKNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSALCMILLPPGTFTAGFIGMAM 1090

Query: 543  SYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAP 665
            SYGLSLN+SLVFSIQNQC LANYIISVERLNQYMHIPSEAP
Sbjct: 1091 SYGLSLNVSLVFSIQNQCILANYIISVERLNQYMHIPSEAP 1131


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score =  381 bits (978), Expect = e-104
 Identities = 189/221 (85%), Positives = 207/221 (93%)
 Frame = +3

Query: 3    LFRAPMSFYDSTPLGRILTRVSSDLSIVDLDVPFSFIFSVGATINTYSNLGVLAVVTWQV 182
            LFRAPMSFYDSTPLGRIL+R+S+DLSIVDLDVPFSF+F+ GAT N YSNLGVLAVVTWQV
Sbjct: 996  LFRAPMSFYDSTPLGRILSRISNDLSIVDLDVPFSFVFAFGATTNAYSNLGVLAVVTWQV 1055

Query: 183  LFVSIPMVYLAIWLQRYYFASAKELMRINGTTKSMLANHLAESIAGGMTIRAFEKEDRFF 362
            LFVSIPM+Y+AI LQRYYFASAKELMRINGTTKS++ANHLAESIAG MTIRAFE+E+RFF
Sbjct: 1056 LFVSIPMIYVAIRLQRYYFASAKELMRINGTTKSLVANHLAESIAGAMTIRAFEEEERFF 1115

Query: 363  AQNLDLIDTNASPFFHNFAANEWLIQRLEILSATVISSSALVMVLLPTGTFSPGFIGMAF 542
             +N+D IDTNASPFFH+FAANEWLIQRLE LSA V+SSSAL M+LLP GTF+ GFIGMA 
Sbjct: 1116 VKNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSALCMILLPPGTFTAGFIGMAM 1175

Query: 543  SYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAP 665
            SYGLSLN+SLVFSIQNQC LANYIISVERLNQYMHIPSEAP
Sbjct: 1176 SYGLSLNVSLVFSIQNQCILANYIISVERLNQYMHIPSEAP 1216


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1423

 Score =  380 bits (976), Expect = e-103
 Identities = 192/221 (86%), Positives = 208/221 (94%)
 Frame = +3

Query: 3    LFRAPMSFYDSTPLGRILTRVSSDLSIVDLDVPFSFIFSVGATINTYSNLGVLAVVTWQV 182
            LFRAPMSFYDSTPLGRIL+RV+SDLSIVDLDVPF+ IF+VGAT N YSNLGVLAVVTWQV
Sbjct: 940  LFRAPMSFYDSTPLGRILSRVTSDLSIVDLDVPFTLIFAVGATTNAYSNLGVLAVVTWQV 999

Query: 183  LFVSIPMVYLAIWLQRYYFASAKELMRINGTTKSMLANHLAESIAGGMTIRAFEKEDRFF 362
            LFVSIPMVYLAI LQ YYFASAKELMRINGTTKS+++NHLAESIAG MTIRAFE+E+RFF
Sbjct: 1000 LFVSIPMVYLAIRLQAYYFASAKELMRINGTTKSLVSNHLAESIAGAMTIRAFEEEERFF 1059

Query: 363  AQNLDLIDTNASPFFHNFAANEWLIQRLEILSATVISSSALVMVLLPTGTFSPGFIGMAF 542
            A+ L+LID NASPFFH+FAANEWLIQRLEI SATV++S+AL MVLLP GTF+ GFIGMA 
Sbjct: 1060 AKTLNLIDINASPFFHSFAANEWLIQRLEIFSATVLASAALCMVLLPPGTFNSGFIGMAL 1119

Query: 543  SYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAP 665
            SYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAP
Sbjct: 1120 SYGLSLNMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAP 1160


Top