BLASTX nr result
ID: Cimicifuga21_contig00010197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00010197
(1507 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF75819.1| terminal flower 2 protein [Malus x domestica] 195 2e-47
dbj|BAF75818.1| terminal flower 2 protein [Malus x domestica] 194 5e-47
dbj|BAF75816.1| terminal flower 2 protein [Malus x domestica] gi... 194 7e-47
dbj|BAF75817.1| terminal flower 2 protein [Malus x domestica] 193 9e-47
ref|XP_002319745.1| chromodomain protein [Populus trichocarpa] g... 193 1e-46
>dbj|BAF75819.1| terminal flower 2 protein [Malus x domestica]
Length = 456
Score = 195 bits (496), Expect = 2e-47
Identities = 141/356 (39%), Positives = 186/356 (52%), Gaps = 48/356 (13%)
Frame = +1
Query: 232 GFFEIEDVRRKRIRKGKVQYLIKWRGWPETANTWEPVDNLQSCSDIIAAFEHXXXXXXXX 411
GF+EIE +RRKR+RKG++QYLIKWRGWPETANTWEP+DNLQS +D++ AFE
Sbjct: 105 GFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHR 164
Query: 412 XXXXXXXXXXX-PKKRQPRPTS-------TSIATQPSDNSLC----------------QS 519
PKKRQ R + T + D +L Q
Sbjct: 165 KRKRKQGTPLSQPKKRQQRSSDPIPIYNMTDVEIGIVDKALSSTALNCSKLVGLPPPQQP 224
Query: 520 NVAPHEGVEDGKAT--ESTRDVDYGHKGVENLGAVEHLAENGSRSIPVE---KTQNKEAD 684
V +G DG A E+T+ V+ EN G +NG R E K A
Sbjct: 225 VVLARDGENDGHANNIEATKKVN-----AEN-GCSNTSQQNGGRREENEDDPKLSELRAT 278
Query: 685 SV--VVGEFSVQVP--DTRYIE----KDGVEEQSKAETLLANGFTGAKKRKSGRVRRFKQ 840
+ VV V VP + R E DG+ + AE + +N TGAK+RKS V+RFKQ
Sbjct: 279 TFTNVVNWDKVSVPFQEARAPEVNGPTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQ 338
Query: 841 AA-LNDLDGARHPVTRTT---NGPNHHSQAPD-------DVRHENLENSDNPSSIVKIIK 987
+ +++L + TR + G S A + R ++ S N I KIIK
Sbjct: 339 ESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIK 398
Query: 988 PMGFSTSVSNNVHDVSLTFRIRRSNGQEEVVDNNYLKVNYPLLLINYYEQHLRYSP 1155
P+G+STSVSN+V DV +TF+ RS+G E +VDN LKVN+PLLLI++YEQHLRY+P
Sbjct: 399 PIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNP 454
>dbj|BAF75818.1| terminal flower 2 protein [Malus x domestica]
Length = 456
Score = 194 bits (493), Expect = 5e-47
Identities = 137/357 (38%), Positives = 182/357 (50%), Gaps = 49/357 (13%)
Frame = +1
Query: 232 GFFEIEDVRRKRIRKGKVQYLIKWRGWPETANTWEPVDNLQSCSDIIAAFEH-XXXXXXX 408
GF+EIE +RRKR+RKG++QYLIKWRGWPETANTWEP+DNLQS +D++ AFE
Sbjct: 105 GFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHR 164
Query: 409 XXXXXXXXXXXXPKKRQPRPTS-------TSIATQPSDNSLC----------------QS 519
PKKRQ R + T + D +L Q
Sbjct: 165 KRKRKQGTPLSQPKKRQQRSSDPIPIYNMTDVEIGIVDKALSSTALNCSKLVGLPPPQQP 224
Query: 520 NVAPHEGVEDGKAT--ESTRDVDYGHKGVENLGAVEHLAENGSRSIPVEK---------- 663
V +G DG E+T+ V+ VEN G +NG R E
Sbjct: 225 VVLARDGENDGHVNNIEATKKVN-----VEN-GCSNTSQQNGGRREENEDDPKLSELRAT 278
Query: 664 --TQNKEADSVVVGEFSVQVPDTRYIEKDGVEEQSKAETLLANGFTGAKKRKSGRVRRFK 837
T D V V + P+ DG+ + AE + +N TGAK+RKS V+RFK
Sbjct: 279 TFTNVVNWDKVSVPFQEAKAPEVNG-PTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFK 337
Query: 838 Q-AALNDLDGARHPVTRTT---NGPNHHSQAP-------DDVRHENLENSDNPSSIVKII 984
Q + +++L + TR + G S A + R ++ S N I KII
Sbjct: 338 QESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKII 397
Query: 985 KPMGFSTSVSNNVHDVSLTFRIRRSNGQEEVVDNNYLKVNYPLLLINYYEQHLRYSP 1155
KP+G+STSVSN+V DV +TF+ RS+G E +VDN LKVN+PLLLI++YEQHLRY+P
Sbjct: 398 KPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNP 454
>dbj|BAF75816.1| terminal flower 2 protein [Malus x domestica]
gi|156104762|dbj|BAF75820.1| like heterochromatin protein
1 [Malus x domestica]
Length = 453
Score = 194 bits (492), Expect = 7e-47
Identities = 131/348 (37%), Positives = 181/348 (52%), Gaps = 40/348 (11%)
Frame = +1
Query: 232 GFFEIEDVRRKRIRKGKVQYLIKWRGWPETANTWEPVDNLQSCSDIIAAFEHXXXXXXXX 411
GF+EIE +RRKR+RKG++QYLIKWRGWPETANTWEP+DNLQS +D++ AFE
Sbjct: 106 GFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHR 165
Query: 412 XXXXXXXXXXX-PKKRQPRPTS-----TSIATQPSDNSLCQSNVAPHEGVEDGKATESTR 573
PKKRQ R T T + D +L + + + V+ +
Sbjct: 166 KRKRKQGTPLSQPKKRQQRSTDPIYNMTDVEIGIVDKALSSTALNCSKLVDLLPPQQPVG 225
Query: 574 DVDYGHKG--VENLGAVEHL-AENGSRSIPVEKTQNKEADS----------------VVV 696
G G V N + AENG +I + + +E + V +
Sbjct: 226 LARVGENGGNVNNTETTTKVNAENGCSNISQQNGERREENEYDPKLSELKATTFTNVVNL 285
Query: 697 GEFSVQVPDTRYIE----KDGVEEQSKAETLLANGFTGAKKRKSGRVRRFKQAA-LNDLD 861
+ SV + R E DG+ + ET+ +N GAK+RKSG V+RFKQ +++L
Sbjct: 286 DKLSVPFQEGRAPEVNGPADGLSKVDCTETVQSN--RGAKRRKSGSVKRFKQETQVSELG 343
Query: 862 GARHPVTRTT----------NGPNHHSQAPDDVRHENLENSDNPSSIVKIIKPMGFSTSV 1011
+ TR + N + R ++ S N I KIIKP+G+STSV
Sbjct: 344 ATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSV 403
Query: 1012 SNNVHDVSLTFRIRRSNGQEEVVDNNYLKVNYPLLLINYYEQHLRYSP 1155
SN+V DV +TF+ RS+G E +VDN LKVN+PLLLI++YEQHLRY+P
Sbjct: 404 SNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNP 451
>dbj|BAF75817.1| terminal flower 2 protein [Malus x domestica]
Length = 453
Score = 193 bits (491), Expect = 9e-47
Identities = 131/348 (37%), Positives = 181/348 (52%), Gaps = 40/348 (11%)
Frame = +1
Query: 232 GFFEIEDVRRKRIRKGKVQYLIKWRGWPETANTWEPVDNLQSCSDIIAAFEHXXXXXXXX 411
GF+EIE +RRKR+RKG++QYLIKWRGWPETANTWEP+DNLQS +D++ AFE
Sbjct: 106 GFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHR 165
Query: 412 XXXXXXXXXXX-PKKRQPRPTS-----TSIATQPSDNSLCQSNVAPHEGVEDGKATESTR 573
PKKRQ R T T + D +L + + + V+ +
Sbjct: 166 KRKRKQGTPLSQPKKRQQRSTDPIYNMTDVEIGIVDKALSSTALNCSKLVDLLPPQQPVG 225
Query: 574 DVDYGHKG--VENLGAVEHL-AENGSRSIPVEKTQNKEADS----------------VVV 696
G G V N + AENG +I + + +E + V +
Sbjct: 226 LARVGENGGNVNNTETTTKVNAENGCSNISQQNGERREENEYDPKLSELKATTFTNVVNL 285
Query: 697 GEFSVQVPDTRYIE----KDGVEEQSKAETLLANGFTGAKKRKSGRVRRFKQAA-LNDLD 861
+ SV + R E DG+ + ET+ +N GAK+RKSG V+RFKQ +++L
Sbjct: 286 DKLSVPFQEGRAPEVNGPTDGLSKIDCTETVQSN--RGAKRRKSGSVKRFKQETQVSELG 343
Query: 862 GARHPVTRTT----------NGPNHHSQAPDDVRHENLENSDNPSSIVKIIKPMGFSTSV 1011
+ TR + N + R ++ S N I KIIKP+G+STSV
Sbjct: 344 ATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSV 403
Query: 1012 SNNVHDVSLTFRIRRSNGQEEVVDNNYLKVNYPLLLINYYEQHLRYSP 1155
SN+V DV +TF+ RS+G E +VDN LKVN+PLLLI++YEQHLRY+P
Sbjct: 404 SNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNP 451
>ref|XP_002319745.1| chromodomain protein [Populus trichocarpa]
gi|222858121|gb|EEE95668.1| chromodomain protein [Populus
trichocarpa]
Length = 438
Score = 193 bits (490), Expect = 1e-46
Identities = 137/357 (38%), Positives = 184/357 (51%), Gaps = 50/357 (14%)
Frame = +1
Query: 232 GFFEIEDVRRKRIRKGKVQYLIKWRGWPETANTWEPVDNLQSCSDIIAAFEH--XXXXXX 405
GFFEIE +RRKR+RKG++QYLIKWRGWPETANTWEP++NLQSCSD+I AFE
Sbjct: 92 GFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSDVIDAFEESLRSGRSS 151
Query: 406 XXXXXXXXXXXXXPKKRQPRPTS--------TSIA-----TQPSDNSLCQSNVAPHEGVE 546
KK+QPR ++ SIA + P +NSL +P + +
Sbjct: 152 RKRKRKHGAPHTPSKKKQPRSSAVYNVMDVEVSIADKHLPSAPLNNSLLADLPSPSQFIG 211
Query: 547 DGKATESTRDVD--YGHKGVENLGAVEHLAENGSRSIPVEKTQNKEAD---SVVVGEFSV 711
G ES+ DV+ K + G++ NGS+ I E+ ++ E D S ++G
Sbjct: 212 LGHGGESSGDVNNIKTSKQTDENGSI-----NGSKHI-FERKEDNEYDPKLSELIGTIPN 265
Query: 712 QVPDTRYIEKDGVEEQSKAETLLANGF--------------TGAKKRKSGRVRRFKQAAL 849
+T EE++ + +ANG TGAKKRKSG V+RFK+ ++
Sbjct: 266 IDVNTNKFTIHFQEEKASEDNGIANGLPKVDYVDLVQNSRCTGAKKRKSGSVKRFKKDSV 325
Query: 850 NDLDGARHPVTRTTNGPNHHSQAPDDVRHENLE----------------NSDNPSSIVKI 981
PV + N + +E NS N +I KI
Sbjct: 326 -----MCEPVFLPNSSGNFSVGSTGAAAQPGIENPSLTWGNSSHMPMTGNSINAFAITKI 380
Query: 982 IKPMGFSTSVSNNVHDVSLTFRIRRSNGQEEVVDNNYLKVNYPLLLINYYEQHLRYS 1152
+KP+GFS SV +NV DV +TFR RS+GQE VDN +LK N P LLIN+YEQHL+YS
Sbjct: 381 LKPIGFSASVFDNVQDVLITFRALRSDGQEVTVDNKFLKANNPHLLINFYEQHLKYS 437