BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010140
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   211   4e-53
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   201   4e-50
ref|XP_002885175.1| pentatricopeptide repeat-containing protein ...   198   4e-49
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   194   8e-48
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   194   8e-48

>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/145 (71%), Positives = 119/145 (82%)
 Frame = +3

Query: 3   NQEIPFNSLKFYVWVSNIQDRLAKNQLVHRVLADTLFRKGPVVLSSVLIQEITSFKCLFS 182
           NQE P   LKFY+WVSN+    AK+Q V  VLA+ L+RKGPVVLS  L+++I +     +
Sbjct: 122 NQENPLYPLKFYIWVSNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRIN 181

Query: 183 EELLCLLIGSWGRLGLAKYCTQVFGQISFLGLTPSTRLYNAVIDALVKSNSLDLAYFKFQ 362
           EELLC+LIGSWGRLGLAKYC ++FGQISFLG++PSTRLYNAVIDALVKSNSLDLAY KFQ
Sbjct: 182 EELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQ 241

Query: 363 QMPADNCVPDRFTYNILIHGACKLG 437
           QM ADNC PDRFTYNILIHG C+ G
Sbjct: 242 QMSADNCKPDRFTYNILIHGVCRSG 266


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g16890, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
           gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score =  201 bits (512), Expect = 4e-50
 Identities = 98/145 (67%), Positives = 114/145 (78%)
 Frame = +3

Query: 3   NQEIPFNSLKFYVWVSNIQDRLAKNQLVHRVLADTLFRKGPVVLSSVLIQEITSFKCLFS 182
           NQ+ P +SL+FY+WVSN     AK+Q +  VL + LFRKGP++LS  L++EI       S
Sbjct: 85  NQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRIS 144

Query: 183 EELLCLLIGSWGRLGLAKYCTQVFGQISFLGLTPSTRLYNAVIDALVKSNSLDLAYFKFQ 362
           +EL+C+LIGSWGRLGLAKYC  VF QISFLG+ PSTRLYNAVIDALVKSNSLDLAY KFQ
Sbjct: 145 DELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQ 204

Query: 363 QMPADNCVPDRFTYNILIHGACKLG 437
           QM +D C PDRFTYNILIHG CK G
Sbjct: 205 QMRSDGCKPDRFTYNILIHGVCKKG 229


>ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331015|gb|EFH61434.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 653

 Score =  198 bits (503), Expect = 4e-49
 Identities = 96/145 (66%), Positives = 115/145 (79%)
 Frame = +3

Query: 3   NQEIPFNSLKFYVWVSNIQDRLAKNQLVHRVLADTLFRKGPVVLSSVLIQEITSFKCLFS 182
           NQ+ P +SL+FY+WVSN     AK+Q +  VL + LFRKGP++LS  L++EI       +
Sbjct: 79  NQDNPLHSLRFYLWVSNTDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRESGYRIT 138

Query: 183 EELLCLLIGSWGRLGLAKYCTQVFGQISFLGLTPSTRLYNAVIDALVKSNSLDLAYFKFQ 362
           +EL+C+LIGSWGRLGLAKYC  VF QISFLG+ PSTRLYNAVIDALVKSNSL+LAY KFQ
Sbjct: 139 DELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQ 198

Query: 363 QMPADNCVPDRFTYNILIHGACKLG 437
           QM +D+C PDRFTYNILIHG CK G
Sbjct: 199 QMRSDDCKPDRFTYNILIHGVCKKG 223


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/148 (62%), Positives = 113/148 (76%), Gaps = 3/148 (2%)
 Frame = +3

Query: 3   NQEIPFNSLKFYVWVSNIQDRLAKNQLVHRVLADTLFRKGP---VVLSSVLIQEITSFKC 173
           NQ+ P ++++FY+WVSN+   L K QL+  VL   L R+GP   V+LS  L+Q+I     
Sbjct: 131 NQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGL 190

Query: 174 LFSEELLCLLIGSWGRLGLAKYCTQVFGQISFLGLTPSTRLYNAVIDALVKSNSLDLAYF 353
             +EELLC+L GSWGRLGLA YC +VFGQI  LGL P+TRLYNAV+DAL+KSNSLDLAY 
Sbjct: 191 KVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYL 250

Query: 354 KFQQMPADNCVPDRFTYNILIHGACKLG 437
           KFQQM + NCVPDRFTYNILIHG C+LG
Sbjct: 251 KFQQMSSHNCVPDRFTYNILIHGVCRLG 278


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/148 (62%), Positives = 113/148 (76%), Gaps = 3/148 (2%)
 Frame = +3

Query: 3   NQEIPFNSLKFYVWVSNIQDRLAKNQLVHRVLADTLFRKGP---VVLSSVLIQEITSFKC 173
           NQ+ P ++++FY+WVSN+   L K QL+  VL   L R+GP   V+LS  L+Q+I     
Sbjct: 131 NQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGL 190

Query: 174 LFSEELLCLLIGSWGRLGLAKYCTQVFGQISFLGLTPSTRLYNAVIDALVKSNSLDLAYF 353
             +EELLC+L GSWGRLGLA YC +VFGQI  LGL P+TRLYNAV+DAL+KSNSLDLAY 
Sbjct: 191 KVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYL 250

Query: 354 KFQQMPADNCVPDRFTYNILIHGACKLG 437
           KFQQM + NCVPDRFTYNILIHG C+LG
Sbjct: 251 KFQQMSSHNCVPDRFTYNILIHGVCRLG 278