BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010129
         (1799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              563   e-158
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   501   e-139
ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788...   456   e-125
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   425   e-116
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   422   e-115

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  563 bits (1450), Expect = e-158
 Identities = 313/610 (51%), Positives = 405/610 (66%), Gaps = 11/610 (1%)
 Frame = -1

Query: 1799 KSYDDTPVENRQKLYALGCILSASTKFSIACSNKIFQHFFPRLMENLGLS-----DACIS 1635
            +SY+D P++++ KL A+G IL  S K SI C N++F+ FF RLM+ LGLS       C+ 
Sbjct: 379  RSYNDIPLQSKHKLCAIGRILYVSAKASITCCNRVFESFFFRLMDTLGLSVRNSSGDCLP 438

Query: 1634 NDNFVVSKKLSFGAFYLCIELLVACRGLALSSEELPSGFISEENTWCCLLKKFAGPLTEV 1455
            N ++V S++L+FGA YLCIELL ACR L + SEEL S  +S + +WCC+L  F+  L + 
Sbjct: 439  NFDYVFSERLNFGALYLCIELLAACRDLVVGSEELTSKSVSAQESWCCMLHSFSSLLMKA 498

Query: 1454 FHSILVTSTAQDVIEADIHCGVKGLQILATYPQCFLSISESRFENILTIFTSIXXXXXXX 1275
            F S+L  ST +D  EADI+ GVKGLQILAT+P  FL IS+S FEN+L  F SI       
Sbjct: 499  FSSVLDASTDKDAYEADIYSGVKGLQILATFPGEFLPISKSIFENVLLTFISIIVEDFNK 558

Query: 1274 XXXXXXXXXXLMEIGTFIKKFNDPEKALSYMTIVVERVVSLLCLDYCTLPLPLQLEAISG 1095
                      L++IG+FI +F++ EKALSY  IVVE++VSL+ LD   LP  L+LEAIS 
Sbjct: 559  TLLWKLALKALVQIGSFIDRFHESEKALSYNYIVVEKIVSLMFLDDFGLPFQLRLEAISD 618

Query: 1094 IGTSGLNYMLQVTRGLEAAISANFLEATVKGNSKSVETLVTLLECYSNKVLPWYDTQGGF 915
            IGT+GLN ML++ +GLE AI AN  E  V GN KS +  V LLECYSNK+LP     G F
Sbjct: 619  IGTTGLNVMLKIVQGLEDAIFANLSEVYVHGNLKSAKIAVQLLECYSNKLLPGIHGAGDF 678

Query: 914  EDVALRFSVNIWNQIECNNTFNIGDQGKELLDRMMQTMKLAVAGCSESNQCLIVHKAYNV 735
            EDV  RF+VNIWNQIE +  F++G Q  ELL+  M  MKLAV  CSE +Q  I+ KAY+V
Sbjct: 679  EDVLSRFAVNIWNQIENSMAFSVGAQENELLNATMTAMKLAVGSCSEGSQGKIIKKAYSV 738

Query: 734  LSSSTIFLLKESLFSSIPTKFEELQLTQDLNTLSRRDEWVISLFASVIIALRPQTPVQNV 555
            LSS   F L ES+  +   + E LQ TQDL   S RD+WVISLFAS IIA+RPQT + N+
Sbjct: 739  LSSCPSFTLMESMPITGTVQLEGLQHTQDLECFSCRDKWVISLFASAIIAVRPQTHIPNI 798

Query: 554  RVILKLFSNIILKGHVPAAQGLGSIINKLPSSKSIMNASSAFTLEEAMDIVLKMGLCGN- 378
            RV+L LF   +LKGHVPAAQ LGS++NKL    + +  SS  TLE+A+DI+    L  + 
Sbjct: 799  RVVLHLFMTNLLKGHVPAAQALGSMVNKLCPKSNGVEISSTCTLEDALDIIFNTSLWDSH 858

Query: 377  ---TLRKCGFVNGDGED--LNKSLNVGNCDLVQSNAIVGLAWIGKGLVMRGNERVKDVIM 213
                L++C  +  D E    N  L+  NC L+Q  AI GLAWIGKGL++RG+E+VKD+ M
Sbjct: 859  NHGPLKRCSGIGVDNEMGLANLCLSASNCQLLQVCAIEGLAWIGKGLLLRGHEKVKDITM 918

Query: 212  MILGCLLSSSKPRNSLLQQDMLQNCSEHAMHPLVMRSAADAFHVLLSDSDVCLNKKFHAT 33
            + L CLLS +       +QD+L         P V +SAADAFHVL+SDS++CLNK+FHA 
Sbjct: 919  IFLRCLLSKNNQ-----EQDVL---------PSVAKSAADAFHVLMSDSEICLNKRFHAN 964

Query: 32   MKPLYKQRLF 3
            ++PLYKQR F
Sbjct: 965  IRPLYKQRFF 974


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  501 bits (1291), Expect = e-139
 Identities = 289/626 (46%), Positives = 397/626 (63%), Gaps = 27/626 (4%)
 Frame = -1

Query: 1799 KSYDDTPVENRQKLYALGCILSASTKFSIACSNKIFQHFFPRLMENLGL-----SDACIS 1635
            KSY++  ++++QKL+ +G IL    K S++  N+IF+ +FPRLME LG+     S AC S
Sbjct: 378  KSYNEISLQSKQKLHMVGRILYVCAKVSVSSCNRIFESYFPRLMEALGILVENTSGACHS 437

Query: 1634 NDNFVVSKKLSFGAFYLCIELLVACRGLALSSEELPSGFISEENTWCCLLKKFAGPLTEV 1455
            N+N V +K+ ++G+FYL I+LL ACR L+ SS+ L S  IS   T+CCLL++F+  LTE 
Sbjct: 438  NENCVKAKQPNYGSFYLSIKLLGACRDLSTSSDNLASQCISTNETYCCLLQRFSTSLTET 497

Query: 1454 FHSILVTSTAQDVIEADIHCGVKGLQILATYPQCFLSISESRFENILTIFTSIXXXXXXX 1275
            F + L TST+    + D++ GVKGLQILAT+P  +L +S+  F+NIL  F SI       
Sbjct: 498  FSAALATSTSGPAQDVDMYLGVKGLQILATFPGGYLFLSKLTFDNILMTFLSIITVDFNK 557

Query: 1274 XXXXXXXXXXLMEIGTFIKKFNDPEKALSYMTIVVERVVSLLCLDYCTLPLPLQLEAISG 1095
                      L++IG+F+   N+ +K +SY+ IVV +++ L      ++P  L+L AIS 
Sbjct: 558  TLLWNQALKALVQIGSFVHGCNESDKEMSYVDIVVGKMILLASSPDFSMPWSLKLTAISS 617

Query: 1094 IGTSGLNYMLQVTRGLEAAISANFLE---------------ATVKGNSKSVETLVTLLEC 960
            IG SG  YML+V  GLE AI AN  E                 V+GN KS + L+ LLEC
Sbjct: 618  IGMSGQKYMLKVFLGLEEAIRANLAEIYVCMIKKKIYVLYSCLVQGNLKSAKILLQLLEC 677

Query: 959  YSNKVLPWYDTQGGFEDVALRFSVNIWNQIECNNTFNIGDQGKE-LLDRMMQTMKLAVAG 783
            YS+++LPW     GFE+V ++F VN+WNQIE  N F +   GKE LLD +M+ MK AVA 
Sbjct: 678  YSDELLPWIQKTEGFEEVLMQFVVNLWNQIENFNAFTVAFHGKESLLDAIMKVMKDAVAF 737

Query: 782  CSESNQCLIVHKAYNVLSSSTIFLLKESLFSSIPTKFEELQLTQDLNTLSRRDEWVISLF 603
            CS  +Q +I++KAY VLSSST   LKESL S    + E  +  Q ++ LS RDEW+ SLF
Sbjct: 738  CSVESQNVIIYKAYGVLSSSTFLPLKESL-SENSVQLECFRAIQQMDRLSSRDEWIHSLF 796

Query: 602  ASVIIALRPQTPVQNVRVILKLFSNIILKGHVPAAQGLGSIINKLPSSKSIMNASSAFTL 423
            ASVIIALRPQT + N R++L LF   +LKGHV  A+ LGS++NKL    +    S   T+
Sbjct: 797  ASVIIALRPQTHIPNTRIVLHLFITALLKGHVTTAEALGSLVNKLDQKSNDACISGDCTI 856

Query: 422  EEAMDIVLKMGLC-----GNTLRKCGFVNGDGEDLNK-SLNVGNCDLVQSNAIVGLAWIG 261
            EEAMDI+  + L      G++ R     NGD  DL K  L+  N   ++  AIVGLAWIG
Sbjct: 857  EEAMDIIFSINLLCSFGNGSSGRFDRTRNGDEMDLIKLCLDAPNLAWIKIPAIVGLAWIG 916

Query: 260  KGLVMRGNERVKDVIMMILGCLLSSSKPRNSLLQQDMLQNCSEHAMHPLVMRSAADAFHV 81
            KGL+MRG+E+VKD+ M+ L CLLS  +   S L+   L+N  E  M   VM+SA+DAF +
Sbjct: 917  KGLLMRGHEKVKDITMVFLNCLLSDGEIGASPLKHGSLENNGEQDMQQSVMKSASDAFQI 976

Query: 80   LLSDSDVCLNKKFHATMKPLYKQRLF 3
            L+SDS++CLN+K+HA ++PLYKQR F
Sbjct: 977  LMSDSELCLNRKYHAIVRPLYKQRFF 1002


>ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max]
          Length = 1135

 Score =  456 bits (1172), Expect = e-125
 Identities = 258/604 (42%), Positives = 371/604 (61%), Gaps = 5/604 (0%)
 Frame = -1

Query: 1799 KSYDDTPVENRQKLYALGCILSASTKFSIACSNKIFQHFFPRLMENLGLSDACISNDNFV 1620
            ++YD  PV+ ++KL+A+G IL  ++K +I+  N +F+  F R+M+NLG S     N +  
Sbjct: 379  ETYDAIPVQEKKKLHAIGRILYITSKTTISSCNAMFESLFTRMMDNLGFS-VRFPNGDIS 437

Query: 1619 VSKKLSFGAFYLCIELLVACRGLALSSEELPSGFISEENTWCCLLKKFAGPLTEVFHSIL 1440
             S++L FG  YLCIELL  CR L + SEE    ++ E  T C +L  F+ PL   F S+L
Sbjct: 438  PSQRLKFGFLYLCIELLAGCRELIVGSEEPALQYVFEHETCCTMLHSFSTPLFNAFGSVL 497

Query: 1439 VTSTAQDVIEADIHCGVKGLQILATYPQCFLSISESRFENILTIFTSIXXXXXXXXXXXX 1260
              S  +  ++ D + GVKGLQILA +      I +S FENIL  F SI            
Sbjct: 498  AVSADRGPLDPDTYVGVKGLQILAMFHSDVFPIQKSIFENILKKFMSIIIEDFNKTILWE 557

Query: 1259 XXXXXLMEIGTFIKKFNDPEKALSYMTIVVERVVSLLCLDYCTLPLPLQLEAISGIGTSG 1080
                 L  +G+F +KF + EKA+SY  +VVE++V +L LD  TL   L++EA+  IG +G
Sbjct: 558  AALKALHHVGSFFQKFCESEKAMSYRNLVVEKIVEILSLDDITLSFSLKVEALLNIGKTG 617

Query: 1079 LNYMLQVTRGLEAAISANFLEATVKGNSKSVETLVTLLECYSNKVLPWYDTQGGFEDVAL 900
            +  ML + +GL  A+ AN  +  V  N +S E  V LLECYS ++LPW    GG ED  +
Sbjct: 618  MKNMLTILQGLGRAVFANLSKVYVHRNLRSSEIAVQLLECYSCQLLPWIHENGGSEDFVM 677

Query: 899  RFSVNIWNQIECNNTFNIGDQGKELLDRMMQTMKLAVAGCSESNQCLIVHKAYNVLSSST 720
            +F+V+IW+Q       +   +GK LLD MM+ M+L+V  CS  +Q LI+ KAY+VLSS T
Sbjct: 678  QFAVDIWSQAGNCMDLSTPFEGKGLLDAMMKAMRLSVGSCSVESQNLIIRKAYSVLSSHT 737

Query: 719  IFLLKESLFSSIPTKFEELQLTQDLNTLSRRDEWVISLFASVIIALRPQTPVQNVRVILK 540
             F LKE          E L LT     +S RDE +ISLFASV+IA+ P+T + N+RV++ 
Sbjct: 738  NFQLKE---------VERLPLTPGKYDISLRDEGIISLFASVVIAVCPKTYIPNIRVLVH 788

Query: 539  LFSNIILKGHVPAAQGLGSIINKLPSSKSIMNASSAFTLEEAMDIVLKMGLCGNT---LR 369
            LF   +L+G VP AQ LGSI+NKL S+ S    SS  TLEEA+D +    +  ++   L+
Sbjct: 789  LFIITLLRGVVPVAQALGSILNKLVSTSSTAENSSDLTLEEALDAIFNTKISFSSTDMLQ 848

Query: 368  KCGFVNGDGEDL--NKSLNVGNCDLVQSNAIVGLAWIGKGLVMRGNERVKDVIMMILGCL 195
            +C   +   E +  +  L + N  ++Q NAI GL+W+GKGL++RG+E++KD+ M+ + CL
Sbjct: 849  RCNGTSNGNEMVFTDICLGIANDRMLQINAICGLSWMGKGLLLRGHEKIKDITMIFMECL 908

Query: 194  LSSSKPRNSLLQQDMLQNCSEHAMHPLVMRSAADAFHVLLSDSDVCLNKKFHATMKPLYK 15
            +S +K  + L+ +D L+N  E     LV++ A DAFHVL+SDS+VCLN+KFHAT++PLYK
Sbjct: 909  ISGTKSASPLI-KDSLENTEEQIQDLLVIKCATDAFHVLMSDSEVCLNRKFHATIRPLYK 967

Query: 14   QRLF 3
            QR F
Sbjct: 968  QRFF 971


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  425 bits (1092), Expect = e-116
 Identities = 246/604 (40%), Positives = 367/604 (60%), Gaps = 7/604 (1%)
 Frame = -1

Query: 1793 YDDTPVENRQKLYALGCILSASTKFSIACSNKIFQHFFPRLMENLGLSDACISNDNFVVS 1614
            Y D P+++RQ+L A+G IL  S   S+A  + +F+ +F RL++ +G+S     ND     
Sbjct: 381  YKDFPLQSRQRLNAVGHILYTSASASVASCDHVFESYFHRLLDFMGISVDQYHNDKISPI 440

Query: 1613 KKLSFGAFYLCIELLVACRGLALSSEELPSGFISEENTWCCLLKKFAGPLTEVFHSILVT 1434
            + L+FGA YLCIE++ ACR L +SS+E      S +     +L+ F+  + ++  S    
Sbjct: 441  RNLNFGALYLCIEVIAACRNLIVSSDE---NTCSVKEKSYSMLQIFSCSVVQLLSSTFSG 497

Query: 1433 STAQDVIEADIHCGVKGLQILATYPQCFLSISESRFENILTIFTSIXXXXXXXXXXXXXX 1254
               +D+ +A+ +C VKGL  L+T+P     +S   FE+IL  F S               
Sbjct: 498  IVKRDLHDAEFYCAVKGLLNLSTFPVGSSPVSRVIFEDILLEFMSFITVNFKFGSLWNHA 557

Query: 1253 XXXLMEIGTFIKKFNDPEKALSYMTIVVERVVSLLCLDYCTLPLPLQLEAISGIGTSGLN 1074
               L  IG+F+ K+    ++ SYM IVVE++  +       LPL L+LE    IG +G +
Sbjct: 558  LKALQHIGSFVDKYPGSVESQSYMHIVVEKIALMFSPHDEVLPLMLKLEMAVDIGRTGRS 617

Query: 1073 YMLQVTRGLEAAISANFLEATVKGNSKSVETLVTLLECYSNKVLPWYDTQGGFEDVALRF 894
            YML++  G+E  I  N  E  V GNSKSVE +++LL+CYS K+LPW+D  G FE+V LRF
Sbjct: 618  YMLKIVGGIEETIFYNLSEVYVYGNSKSVEIVLSLLDCYSTKILPWFDEAGDFEEVILRF 677

Query: 893  SVNIWNQIECNNTFNIGDQG--KELLDRMMQTMKLAVAGCSESNQCLIVHKAYNVLSSST 720
            ++NIW+QIE  +TF+       + LLD  M  +KL+V  CS+ +Q +IV KA+NVL +S+
Sbjct: 678  ALNIWDQIEKCSTFSTSMDKCIQVLLDATMMALKLSVRSCSKESQNIIVQKAFNVLLTSS 737

Query: 719  IFLLKESLFSSIPTKFEELQLTQDLNTLSRRDEWVISLFASVIIALRPQTPVQNVRVILK 540
               LK +L ++IP + E LQ  Q  +  + RDEW++SLFASV IALRPQ  V +VR+I++
Sbjct: 738  FSPLKVTLSNTIPVQMEGLQFLQQKDNPTSRDEWILSLFASVTIALRPQVHVPDVRLIIR 797

Query: 539  LFSNIILKGHVPAAQGLGSIINKLPSSKSIMNASSAFTLEEAMDIVLKMGLCGNTLRKC- 363
            L      +G VPAAQ LGS+INKL      +  SS  +LEEA+DI+ K      T  +C 
Sbjct: 798  LLMLSTTRGCVPAAQALGSMINKLSVKSDKVEVSSYVSLEEAIDIIFK------TEFRCL 851

Query: 362  -GFVNGDGEDL---NKSLNVGNCDLVQSNAIVGLAWIGKGLVMRGNERVKDVIMMILGCL 195
                 GDG ++   +   ++    L+Q +A+VGL+WIGKGL++ G+++V+D+ M+ L  L
Sbjct: 852  HNESTGDGSEMFLTDLCSSIEKSSLLQVHAVVGLSWIGKGLLLCGHDKVRDITMVFLQLL 911

Query: 194  LSSSKPRNSLLQQDMLQNCSEHAMHPLVMRSAADAFHVLLSDSDVCLNKKFHATMKPLYK 15
            +S S+   S LQQ  L+  +E ++   VM+ AA+AFH+L+SDS+ CLN+KFHA ++PLYK
Sbjct: 912  VSKSRTDASPLQQFKLEKDNETSLDFAVMKGAAEAFHILMSDSEACLNRKFHAIVRPLYK 971

Query: 14   QRLF 3
            QR F
Sbjct: 972  QRFF 975


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1140

 Score =  422 bits (1084), Expect = e-115
 Identities = 249/605 (41%), Positives = 353/605 (58%), Gaps = 8/605 (1%)
 Frame = -1

Query: 1793 YDDTPVENRQKLYALGCILSASTKFSIACSNKIFQHFFPRLMENLGLSDACIS---NDNF 1623
            YD   V+ ++KL+A+G IL  S K SI   N +FQ  F R+M+ LG S + I    N   
Sbjct: 381  YDTISVQEKKKLHAIGRILYISAKTSIPSCNAVFQSLFLRMMDKLGFSASNIDGLQNGGI 440

Query: 1622 VVSKKLSFGAFYLCIELLVACRGLALSSEELPSGFISEENTWCCLLKKFAGPLTEVFHSI 1443
            + S+ ++FG  YLCIELL  CR L + S+E       +  T+C +L   +  L   F S+
Sbjct: 441  LASQSVNFGFLYLCIELLSGCRELVILSDE-------KRETYCTILHSSSAVLFNAFGSV 493

Query: 1442 LVTSTAQDVIEADIHCGVKGLQILATYPQCFLSISESRFENILTIFTSIXXXXXXXXXXX 1263
            L  +  +     DI+ GVKGLQILA +      I +S FENIL  F SI           
Sbjct: 494  LAVTADRCPSHPDIYIGVKGLQILAMFHLDVFPIPKSTFENILKKFMSIIIEDFGQTVLW 553

Query: 1262 XXXXXXLMEIGTFIKKFNDPEKALSYMTIVVERVVSLLCLDYCTLPLPLQLEAISGIGTS 1083
                  L  IG+F++KF++ EKA+SY + VV++++ +L LD   LP  L++EA+  IG +
Sbjct: 554  NATLKALFHIGSFVQKFSESEKAMSYRSFVVDKIMEMLSLDDIALPFSLKVEALYDIGMT 613

Query: 1082 GLNYMLQVTRGLEAAISANFLEATVKGNSKSVETLVTLLECYSNKVLPWYDTQGGFEDVA 903
            G+  ML + + +E AI  N  E  V  N  S ET V LLECYS K+LPW    GG E+  
Sbjct: 614  GMKNMLTILQAMEGAIFTNLSE--VHSNLTSHETAVQLLECYSCKLLPWILKNGGAEEFV 671

Query: 902  LRFSVNIWNQIECNNTFNIGDQGKELLDRMMQTMKLAVAGCSESNQCLIVHKAYNVLSSS 723
            ++F+V+IWNQ      FN   + K LLD MM+ MK++V  CS  +Q + + KAY+ LSS 
Sbjct: 672  VQFAVDIWNQAGNCMDFNSPFEDKGLLDAMMKAMKVSVGCCSVESQNVTIQKAYSTLSSH 731

Query: 722  TIFLLKESLFSSIPTKFEELQLTQDLNTLSRRDEWVISLFASVIIALRPQTPVQNVRVIL 543
            T F L +            L LT     +S RDE ++ LFASVIIALRP+T + N+R +L
Sbjct: 732  TKFQLND---------VGRLPLTSGKYDISPRDEGILLLFASVIIALRPKTHIPNIRGLL 782

Query: 542  KLFSNIILKGHVPAAQGLGSIINKLPSSKSIMNASSAFTLEEAMDIVL--KMGLCGNTLR 369
             LF   +LKG VP AQ LGS++NKL S  +    S   TLEEA+DI+   K+    N + 
Sbjct: 783  HLFIITLLKGVVPVAQALGSMLNKLTSKSNGAEKSDELTLEEALDIIFNTKIWFSSNNML 842

Query: 368  KCGFVNGDGEDL---NKSLNVGNCDLVQSNAIVGLAWIGKGLVMRGNERVKDVIMMILGC 198
            +    + +G D+   +  L + N  L+QSNAI GL+WIGKGL++RG+E++KD+ M+   C
Sbjct: 843  QIYNGSSNGSDIVLTDLCLGITNDRLLQSNAICGLSWIGKGLLLRGHEKIKDITMIFTEC 902

Query: 197  LLSSSKPRNSLLQQDMLQNCSEHAMHPLVMRSAADAFHVLLSDSDVCLNKKFHATMKPLY 18
            L+S  +  +  L +  L+N  +    PL  + A +AFHVL+SD++ CLN+KFHAT++PLY
Sbjct: 903  LISDRRKTSVPLVEGSLENTEKQKCDPLARKCATEAFHVLMSDAEDCLNRKFHATVRPLY 962

Query: 17   KQRLF 3
            KQR F
Sbjct: 963  KQRFF 967