BLASTX nr result

ID: Cimicifuga21_contig00010110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010110
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|2...   757   0.0  
emb|CAN61809.1| hypothetical protein VITISV_014296 [Vitis vinife...   753   0.0  
ref|NP_192202.1| Elongation factor Tu [Arabidopsis thaliana] gi|...   752   0.0  
ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arab...   751   0.0  
ref|XP_002524809.1| elongation factor tu, putative [Ricinus comm...   751   0.0  

>ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|222861161|gb|EEE98703.1|
            predicted protein [Populus trichocarpa]
          Length = 450

 Score =  757 bits (1955), Expect = 0.0
 Identities = 377/449 (83%), Positives = 409/449 (91%), Gaps = 1/449 (0%)
 Frame = +3

Query: 114  MASHVLRNPSSKRLASLTS-IHSCCRGAISSNLSISESIHGNERVSDVGSWWRSMATFTR 290
            MAS VLRNP+SKRL   +S IH CCRG+ S++ SISES+  +   +    WWRSMATFTR
Sbjct: 1    MASVVLRNPNSKRLLPFSSQIHCCCRGSASTHSSISESLSSSNDRTSSSPWWRSMATFTR 60

Query: 291  NKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFDEIDKAPEERTRGITIQTAHV 470
            NKPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKA+AFDEIDKAPEE+ RGITI TAHV
Sbjct: 61   NKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHV 120

Query: 471  EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV 650
            EYET KRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSA DGPMPQTKEHILLARQVGV
Sbjct: 121  EYETTKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMPQTKEHILLARQVGV 180

Query: 651  PSLVCFLNKVDSMDDPELIELVEMELRELLNFYKFPGDEIPIIRGSALKALEGTNDDIGK 830
            PSLVCFLNKVD + DPELIELVEME+RELLNFYKFPGDEIPI++GSAL AL+GTN++IGK
Sbjct: 181  PSLVCFLNKVDVVSDPELIELVEMEVRELLNFYKFPGDEIPIVQGSALSALQGTNEEIGK 240

Query: 831  QAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDVEIL 1010
             AILKLM+AVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTV TGR+EQGTIK GE+VEIL
Sbjct: 241  NAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEIL 300

Query: 1011 GLMQGGPLKSTVTGVEMFKKMLDHGQAGDNVGLLLRGLKRNDVQRGQVVAKPSTLKTYKR 1190
            GL + GP K+TVTGVEMFKK+LD GQAGDNVGLLLRGLKR DVQRGQV+AKP T+KT KR
Sbjct: 301  GLSKDGPKKTTVTGVEMFKKLLDQGQAGDNVGLLLRGLKREDVQRGQVIAKPGTVKTSKR 360

Query: 1191 FEAEIYVLTKEEGGRHTAFFSNYMPQFYLRTADITGKVELPKNVEMVMPGDNITAVFELI 1370
            FEAEIY LTK+EGGRHTAFFSNY PQFYLRTADITGKVELP+NV+MVMPGDN+TAVFELI
Sbjct: 361  FEAEIYSLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAVFELI 420

Query: 1371 NSVPLHEGQRFALREGGRTVGAGVVSKVI 1457
              VPL  GQRFALREGGRTVGAGVVSKV+
Sbjct: 421  LPVPLETGQRFALREGGRTVGAGVVSKVL 449


>emb|CAN61809.1| hypothetical protein VITISV_014296 [Vitis vinifera]
            gi|296086691|emb|CBI32326.3| unnamed protein product
            [Vitis vinifera]
          Length = 449

 Score =  753 bits (1944), Expect = 0.0
 Identities = 376/450 (83%), Positives = 411/450 (91%), Gaps = 1/450 (0%)
 Frame = +3

Query: 114  MASHVLRNPSSKRLASLTS-IHSCCRGAISSNLSISESIHGNERVSDVGSWWRSMATFTR 290
            MAS  LRNP+S+R   L+S I+S CRG+IS+  SIS +   +     +  WWRSM TFTR
Sbjct: 1    MASVALRNPNSRRFLPLSSKIYSSCRGSISTQFSISPNDSTSSPPPTI-PWWRSMGTFTR 59

Query: 291  NKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFDEIDKAPEERTRGITIQTAHV 470
             KPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKAVAFDEIDKAPEE+ RGITI TAHV
Sbjct: 60   TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKKRGITIATAHV 119

Query: 471  EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV 650
            EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV
Sbjct: 120  EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV 179

Query: 651  PSLVCFLNKVDSMDDPELIELVEMELRELLNFYKFPGDEIPIIRGSALKALEGTNDDIGK 830
            PSLVCFLNKVD+ DDPEL++LVEMELRELL+FYKFPGDEIPIIRGSAL AL+GTN++IGK
Sbjct: 180  PSLVCFLNKVDATDDPELVDLVEMELRELLSFYKFPGDEIPIIRGSALCALQGTNEEIGK 239

Query: 831  QAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDVEIL 1010
            QAILKLM+AVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTV TGR+EQGTIK GE+VEIL
Sbjct: 240  QAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEIL 299

Query: 1011 GLMQGGPLKSTVTGVEMFKKMLDHGQAGDNVGLLLRGLKRNDVQRGQVVAKPSTLKTYKR 1190
            GL Q GPLKSTVTGVEMFKK+LD GQAGDNVGLLLRGLKR D+QRGQV+AKP T KTYKR
Sbjct: 300  GLTQSGPLKSTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGTCKTYKR 359

Query: 1191 FEAEIYVLTKEEGGRHTAFFSNYMPQFYLRTADITGKVELPKNVEMVMPGDNITAVFELI 1370
            FEAEIYVLTK+EGGRHTAF +NY PQFY+RTAD+TGKV+LP+ V+MVMPGDN+TAVFELI
Sbjct: 360  FEAEIYVLTKDEGGRHTAFVTNYRPQFYMRTADVTGKVQLPEEVKMVMPGDNVTAVFELI 419

Query: 1371 NSVPLHEGQRFALREGGRTVGAGVVSKVIS 1460
            ++VPL  GQRFALREGGRTVGAGVVSKVIS
Sbjct: 420  SAVPLEAGQRFALREGGRTVGAGVVSKVIS 449


>ref|NP_192202.1| Elongation factor Tu [Arabidopsis thaliana]
            gi|25090254|sp|Q9ZT91.1|EFTM_ARATH RecName:
            Full=Elongation factor Tu, mitochondrial; Flags:
            Precursor gi|3924612|gb|AAC79113.1| mitochondrial
            elongation factor Tu [Arabidopsis thaliana]
            gi|4263511|gb|AAD15337.1| mitochondrial elongation factor
            Tu [Arabidopsis thaliana] gi|7269778|emb|CAB77778.1|
            mitochondrial elongation factor Tu [Arabidopsis thaliana]
            gi|22531166|gb|AAM97087.1| mitochondrial elongation
            factor Tu [Arabidopsis thaliana]
            gi|31376381|gb|AAP49517.1| At4g02930 [Arabidopsis
            thaliana] gi|110742332|dbj|BAE99090.1| mitochondrial
            elongation factor Tu [Arabidopsis thaliana]
            gi|332656852|gb|AEE82252.1| Elongation factor Tu
            [Arabidopsis thaliana]
          Length = 454

 Score =  752 bits (1942), Expect = 0.0
 Identities = 380/454 (83%), Positives = 415/454 (91%), Gaps = 5/454 (1%)
 Frame = +3

Query: 114  MASHVLRNPSSKRLASLTS-IHSCCRGAISSNLSISESIHGNERVSDV---GSWWRSMAT 281
            MAS VLRNPSSKRL   +S I+S C  +++S+ SIS SI G++  S      S+WRSMAT
Sbjct: 1    MASVVLRNPSSKRLVPFSSQIYSRCGASVTSSYSISHSIGGDDLSSSTFGTSSFWRSMAT 60

Query: 282  FTRNKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFDEIDKAPEERTRGITIQT 461
            FTRNKPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKA+AFDEIDKAPEE+ RGITI T
Sbjct: 61   FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120

Query: 462  AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQ 641
            AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVS PDGPMPQTKEHILLARQ
Sbjct: 121  AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180

Query: 642  VGVPSLVCFLNKVDSMDDPELIELVEMELRELLNFYKFPGDEIPIIRGSALKALEGTNDD 821
            VGVPSLVCFLNKVD +DDPEL+ELVEMELRELL+FYKFPGD+IPIIRGSAL AL+GTND+
Sbjct: 181  VGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDE 240

Query: 822  IGKQAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDV 1001
            IG+QAILKLM+AVDEYIPDPVR LDKPFLMPIEDVFSIQGRGTV TGRIEQG IK GE+V
Sbjct: 241  IGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEV 300

Query: 1002 EILGLMQGG-PLKSTVTGVEMFKKMLDHGQAGDNVGLLLRGLKRNDVQRGQVVAKPSTLK 1178
            EILGL +GG PLKSTVTGVEMFKK+LD+GQAGDNVGLLLRGLKR D+QRG V+AKP + K
Sbjct: 301  EILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKPGSCK 360

Query: 1179 TYKRFEAEIYVLTKEEGGRHTAFFSNYMPQFYLRTADITGKVELPKNVEMVMPGDNITAV 1358
            TYK+FEAEIYVLTK+EGGRHTAFFSNY PQFYLRTADITGKVELP+NV+MVMPGDN+TAV
Sbjct: 361  TYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV 420

Query: 1359 FELINSVPLHEGQRFALREGGRTVGAGVVSKVIS 1460
            FELI  VPL  GQRFALREGGRTVGAGVVSKV++
Sbjct: 421  FELIMPVPLETGQRFALREGGRTVGAGVVSKVMT 454


>ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arabidopsis lyrata subsp.
            lyrata] gi|297318641|gb|EFH49063.1| hypothetical protein
            ARALYDRAFT_490266 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  751 bits (1940), Expect = 0.0
 Identities = 382/454 (84%), Positives = 414/454 (91%), Gaps = 5/454 (1%)
 Frame = +3

Query: 114  MASHVLRNPSSKRLASLTS-IHSCCRGAISSNLSISESIHGNERVSDV---GSWWRSMAT 281
            MAS VLRNPSSKRL   +S I+S C  +I+S+ SIS SI G++  S      S WRSMAT
Sbjct: 1    MASVVLRNPSSKRLVPFSSQIYSRCGASITSSYSISHSIGGDDLSSSTLGTSSLWRSMAT 60

Query: 282  FTRNKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFDEIDKAPEERTRGITIQT 461
            FTRNKPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKA+AFDEIDKAPEE+ RGITI T
Sbjct: 61   FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT 120

Query: 462  AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQ 641
            AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVS PDGPMPQTKEHILLARQ
Sbjct: 121  AHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQ 180

Query: 642  VGVPSLVCFLNKVDSMDDPELIELVEMELRELLNFYKFPGDEIPIIRGSALKALEGTNDD 821
            VGVPSLVCFLNKVD +DDPEL+ELVEMELRELL+FYKFPGD+IPIIRGSAL AL+GTND+
Sbjct: 181  VGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDE 240

Query: 822  IGKQAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDV 1001
            IG+QAILKLM+AVDEYIPDPVR LDK FLMPIEDVFSIQGRGTV TGRIEQGTIK GE+V
Sbjct: 241  IGRQAILKLMDAVDEYIPDPVRVLDKAFLMPIEDVFSIQGRGTVATGRIEQGTIKVGEEV 300

Query: 1002 EILGLMQGG-PLKSTVTGVEMFKKMLDHGQAGDNVGLLLRGLKRNDVQRGQVVAKPSTLK 1178
            EILGL +GG PLKSTVTGVEMFKK+LD+GQAGDNVGLLLRGLKR D+QRG V+AKP + K
Sbjct: 301  EILGLREGGLPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKPGSCK 360

Query: 1179 TYKRFEAEIYVLTKEEGGRHTAFFSNYMPQFYLRTADITGKVELPKNVEMVMPGDNITAV 1358
            TYK+FEAEIYVLTK+EGGRHTAFFSNY PQFYLRTADITGKVELP+NV+MVMPGDN+TAV
Sbjct: 361  TYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV 420

Query: 1359 FELINSVPLHEGQRFALREGGRTVGAGVVSKVIS 1460
            FELI  VPL  GQRFALREGGRTVGAGVVSKV+S
Sbjct: 421  FELIMPVPLETGQRFALREGGRTVGAGVVSKVMS 454


>ref|XP_002524809.1| elongation factor tu, putative [Ricinus communis]
            gi|223535993|gb|EEF37652.1| elongation factor tu,
            putative [Ricinus communis]
          Length = 449

 Score =  751 bits (1939), Expect = 0.0
 Identities = 375/450 (83%), Positives = 410/450 (91%), Gaps = 1/450 (0%)
 Frame = +3

Query: 114  MASHVLRNPSSKRLASLTS-IHSCCRGAISSNLSISESIHGNERVSDVGSWWRSMATFTR 290
            MA+  LRNP+SKRL   +S I+  CRG  ++  S   S+  N+  +    WWRSMATFTR
Sbjct: 1    MAAAALRNPNSKRLLPFSSQIYWSCRGGSAACASTHFSLSSNDSFNH-NPWWRSMATFTR 59

Query: 291  NKPHVNVGTIGHVDHGKTTLTAAITRVLSEEGKAKAVAFDEIDKAPEERTRGITIQTAHV 470
             KPHVNVGTIGHVDHGKTTLTAAIT+VL+EEGKAKAVAFDEIDKAPEE+ RGITI TAHV
Sbjct: 60   TKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAVAFDEIDKAPEEKKRGITIATAHV 119

Query: 471  EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV 650
            EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV
Sbjct: 120  EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGV 179

Query: 651  PSLVCFLNKVDSMDDPELIELVEMELRELLNFYKFPGDEIPIIRGSALKALEGTNDDIGK 830
            PSLVCFLNK D++DDPEL+ELVEMELRELL+FYKFPGDEIPIIRGSAL AL+GTN+++GK
Sbjct: 180  PSLVCFLNKCDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNEELGK 239

Query: 831  QAILKLMEAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVVTGRIEQGTIKTGEDVEIL 1010
            +AILKLM+AVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTV TGR+EQGTIK GE+VEIL
Sbjct: 240  KAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEIL 299

Query: 1011 GLMQGGPLKSTVTGVEMFKKMLDHGQAGDNVGLLLRGLKRNDVQRGQVVAKPSTLKTYKR 1190
            GLMQG PLK+TVTGVEMFKK+LD GQAGDNVGLLLRGLKR DVQRGQV+AKP ++KTYK+
Sbjct: 300  GLMQGAPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDVQRGQVIAKPGSVKTYKK 359

Query: 1191 FEAEIYVLTKEEGGRHTAFFSNYMPQFYLRTADITGKVELPKNVEMVMPGDNITAVFELI 1370
            FEAEIYVLTK+EGGRHTAFFSNY PQFY+RTADITGKVELP+NV+MVMPGDN+TA FELI
Sbjct: 360  FEAEIYVLTKDEGGRHTAFFSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTATFELI 419

Query: 1371 NSVPLHEGQRFALREGGRTVGAGVVSKVIS 1460
              VPL  GQRFALREGGRTVGAGVVSKVIS
Sbjct: 420  LPVPLEAGQRFALREGGRTVGAGVVSKVIS 449


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