BLASTX nr result

ID: Cimicifuga21_contig00010065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010065
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632756.1| PREDICTED: DNA replication complex GINS prot...   331   1e-88
ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|1956306...   296   3e-78
ref|XP_003576019.1| PREDICTED: DNA replication complex GINS prot...   293   2e-77
tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea m...   289   3e-76
gb|EAY98271.1| hypothetical protein OsI_20178 [Oryza sativa Indi...   288   6e-76

>ref|XP_003632756.1| PREDICTED: DNA replication complex GINS protein PSF1-like [Vitis
           vinifera] gi|297743415|emb|CBI36282.3| unnamed protein
           product [Vitis vinifera]
          Length = 197

 Score =  331 bits (848), Expect = 1e-88
 Identities = 155/195 (79%), Positives = 181/195 (92%)
 Frame = -3

Query: 618 MYGRRASQLLRDFSANEPGQLSSFNTDTFDQVIKECDAHHVELQALMRKIQEEGLDIQTT 439
           MYGRRA QL+++FS+ E GQL+ FN+D FDQV+KEC  H++ELQ+LMRKIQEEG+DIQTT
Sbjct: 1   MYGRRACQLIKEFSSAEKGQLTGFNSDMFDQVVKECSTHYLELQSLMRKIQEEGMDIQTT 60

Query: 438 RNADHYGAVIHHLALIRNKRCLMSYVYNRAEIVQNLRWKVGPVLPREVQEKVNYSEEEYF 259
           RNADH+G VIHHL+L+RNKRCLM+YVYNRAEI++NLRWK+GPVLP+E+ EK++YSEEEYF
Sbjct: 61  RNADHFGMVIHHLSLMRNKRCLMAYVYNRAEIIRNLRWKIGPVLPQEIHEKLSYSEEEYF 120

Query: 258 KNHSAALESYMSEMELDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARHSIHFLKR 79
           KNHS ALESYMSE+ELDLTVDMVPPKDPYI+VRVLDDIG+V LSDQS NLA HS+HFLKR
Sbjct: 121 KNHSTALESYMSELELDLTVDMVPPKDPYIQVRVLDDIGEVLLSDQSANLACHSMHFLKR 180

Query: 78  TDAEQFISQGLMEEL 34
            DAEQFISQGLMEEL
Sbjct: 181 IDAEQFISQGLMEEL 195


>ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|195630675|gb|ACG36644.1| DNA
           replication complex GINS protein PSF1 [Zea mays]
           gi|223942169|gb|ACN25168.1| unknown [Zea mays]
           gi|414584737|tpg|DAA35308.1| TPA: DNA replication
           complex GINS protein PSF1 [Zea mays]
          Length = 197

 Score =  296 bits (758), Expect = 3e-78
 Identities = 133/194 (68%), Positives = 174/194 (89%)
 Frame = -3

Query: 618 MYGRRASQLLRDFSANEPGQLSSFNTDTFDQVIKECDAHHVELQALMRKIQEEGLDIQTT 439
           MYGRRASQLL++  ++E GQL  FN+D FDQVI+EC+ H+ + Q+L+RK+ E+ LDI+TT
Sbjct: 1   MYGRRASQLLKEIDSSEAGQLVPFNSDVFDQVIRECNEHNSQFQSLIRKMVEQNLDIETT 60

Query: 438 RNADHYGAVIHHLALIRNKRCLMSYVYNRAEIVQNLRWKVGPVLPREVQEKVNYSEEEYF 259
           RN DHYGA IHHL+L+RNKRCLM+Y+YNRAE++Q+ RWK+GPVLP ++QEK+++SE+EYF
Sbjct: 61  RNEDHYGAAIHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHDIQEKLHFSEKEYF 120

Query: 258 KNHSAALESYMSEMELDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARHSIHFLKR 79
           KNHSAA++SY+SEM++DLTVDMVPPKDPYI+VRVL+DIG+V L D S +L ++S+HFL+R
Sbjct: 121 KNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSVSLTKNSLHFLRR 180

Query: 78  TDAEQFISQGLMEE 37
           TDAEQFISQGLMEE
Sbjct: 181 TDAEQFISQGLMEE 194


>ref|XP_003576019.1| PREDICTED: DNA replication complex GINS protein PSF1-like
           [Brachypodium distachyon]
          Length = 197

 Score =  293 bits (751), Expect = 2e-77
 Identities = 132/194 (68%), Positives = 173/194 (89%)
 Frame = -3

Query: 618 MYGRRASQLLRDFSANEPGQLSSFNTDTFDQVIKECDAHHVELQALMRKIQEEGLDIQTT 439
           MYGRRASQLL++  + EPGQL  FN+D FDQV++EC+ H+ + Q+L+RK+ ++ LDI+TT
Sbjct: 1   MYGRRASQLLKELDSCEPGQLVVFNSDVFDQVVRECNEHNAQFQSLIRKMVDQNLDIETT 60

Query: 438 RNADHYGAVIHHLALIRNKRCLMSYVYNRAEIVQNLRWKVGPVLPREVQEKVNYSEEEYF 259
           RN DHYGA IHHL+L+RNKRCL++Y+YNRAE +Q+ RWK+GPVLP E+QEK+++SE+EYF
Sbjct: 61  RNEDHYGAAIHHLSLLRNKRCLIAYMYNRAETIQSFRWKLGPVLPHEIQEKLHFSEKEYF 120

Query: 258 KNHSAALESYMSEMELDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARHSIHFLKR 79
           KNHSAA++SY+SEM++DLTVDMVPPKDPYI+VRVL+DIG+V L D S +L ++S+HFL+R
Sbjct: 121 KNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSISLTKNSLHFLRR 180

Query: 78  TDAEQFISQGLMEE 37
           TDAEQFISQGLMEE
Sbjct: 181 TDAEQFISQGLMEE 194


>tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea mays]
          Length = 204

 Score =  289 bits (740), Expect = 3e-76
 Identities = 133/201 (66%), Positives = 174/201 (86%), Gaps = 7/201 (3%)
 Frame = -3

Query: 618 MYGRRASQLLRDFSANEPGQLSSFNTDTFDQVIKECDAHHVELQALMRKIQEEGLDIQTT 439
           MYGRRASQLL++  ++E GQL  FN+D FDQVI+EC+ H+ + Q+L+RK+ E+ LDI+TT
Sbjct: 1   MYGRRASQLLKEIDSSEAGQLVPFNSDVFDQVIRECNEHNSQFQSLIRKMVEQNLDIETT 60

Query: 438 RNADHYGAVIHHLALIRNKRCLMSYVY-------NRAEIVQNLRWKVGPVLPREVQEKVN 280
           RN DHYGA IHHL+L+RNKRCLM+Y+Y       NRAE++Q+ RWK+GPVLP ++QEK++
Sbjct: 61  RNEDHYGAAIHHLSLLRNKRCLMAYMYKTKSSQYNRAEVIQSFRWKIGPVLPHDIQEKLH 120

Query: 279 YSEEEYFKNHSAALESYMSEMELDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARH 100
           +SE+EYFKNHSAA++SY+SEM++DLTVDMVPPKDPYI+VRVL+DIG+V L D S +L ++
Sbjct: 121 FSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSVSLTKN 180

Query: 99  SIHFLKRTDAEQFISQGLMEE 37
           S+HFL+RTDAEQFISQGLMEE
Sbjct: 181 SLHFLRRTDAEQFISQGLMEE 201


>gb|EAY98271.1| hypothetical protein OsI_20178 [Oryza sativa Indica Group]
           gi|222631809|gb|EEE63941.1| hypothetical protein
           OsJ_18766 [Oryza sativa Japonica Group]
          Length = 225

 Score =  288 bits (738), Expect = 6e-76
 Identities = 130/193 (67%), Positives = 169/193 (87%)
 Frame = -3

Query: 618 MYGRRASQLLRDFSANEPGQLSSFNTDTFDQVIKECDAHHVELQALMRKIQEEGLDIQTT 439
           MYGRRASQLL++  + E GQL  FN+D FDQVI+EC+ H+ + Q+L+RK+ E+ LDI+TT
Sbjct: 1   MYGRRASQLLKEVDSCEAGQLVPFNSDVFDQVIRECNEHNTQFQSLIRKMVEQNLDIETT 60

Query: 438 RNADHYGAVIHHLALIRNKRCLMSYVYNRAEIVQNLRWKVGPVLPREVQEKVNYSEEEYF 259
           RN DHYGA +HHL+L+RNKRCLM+Y+YNRAE++Q+ RWK+GPVLP E+QEK+++SE+EYF
Sbjct: 61  RNDDHYGAAVHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGPVLPHEIQEKLHFSEKEYF 120

Query: 258 KNHSAALESYMSEMELDLTVDMVPPKDPYIKVRVLDDIGDVFLSDQSPNLARHSIHFLKR 79
           KNHSAA++SYMSEM++DLTVDMVPPKDPYI+VRVL+DIG+V L D S +L ++S+HFL+R
Sbjct: 121 KNHSAAIKSYMSEMDIDLTVDMVPPKDPYIQVRVLEDIGEVSLGDHSISLTKNSLHFLRR 180

Query: 78  TDAEQFISQGLME 40
           TD EQFISQ L E
Sbjct: 181 TDTEQFISQSLCE 193


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