BLASTX nr result

ID: Cimicifuga21_contig00010025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00010025
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, ...   174   9e-42
emb|CBI24067.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002266058.1| PREDICTED: microtubule-associated protein SP...   169   3e-40
ref|NP_178730.2| armadillo/beta-catenin-like repeat-containing p...   145   6e-33
ref|XP_002883759.1| binding protein [Arabidopsis lyrata subsp. l...   145   6e-33

>ref|XP_002527814.1| Microtubule-associated protein TORTIFOLIA1, putative [Ricinus
            communis] gi|223532788|gb|EEF34566.1|
            Microtubule-associated protein TORTIFOLIA1, putative
            [Ricinus communis]
          Length = 840

 Score =  174 bits (441), Expect = 9e-42
 Identities = 83/119 (69%), Positives = 105/119 (88%)
 Frame = +3

Query: 6    LDSAFVEVLCSGDDLTLIELLDRTGPVLERLSHETVGEILSTLAAHILDQKYLGSIIPWL 185
            LDSA+VE LCS D+L LIELLDRTGPVLE LSH+TV +IL+TLA++ L+Q++  SI+PWL
Sbjct: 715  LDSAYVEALCSTDELLLIELLDRTGPVLESLSHKTVSDILNTLASYFLEQRFTNSIVPWL 774

Query: 186  QQVVELSSTYGPDYLVLTAKARMEFLSAIQEAASMNFSNPADRRSVTQLALKLRQVWGK 362
            QQ+V+LS+ +GPDYLVL+AKAR EFLSAIQEAA+M FSNPA+RRS+TQL ++L  +WGK
Sbjct: 775  QQMVDLSTIHGPDYLVLSAKARREFLSAIQEAANMEFSNPAERRSITQLTMRLCHLWGK 833


>emb|CBI24067.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score =  172 bits (437), Expect = 3e-41
 Identities = 80/119 (67%), Positives = 105/119 (88%)
 Frame = +3

Query: 6    LDSAFVEVLCSGDDLTLIELLDRTGPVLERLSHETVGEILSTLAAHILDQKYLGSIIPWL 185
            ++SA+VE LCSGD+L L+ELLDRTGPVLE LSH+TV +IL  LA++ L+Q+++ S+IPWL
Sbjct: 710  IESAYVEALCSGDELVLVELLDRTGPVLECLSHKTVNDILCILASYFLEQRFMNSVIPWL 769

Query: 186  QQVVELSSTYGPDYLVLTAKARMEFLSAIQEAASMNFSNPADRRSVTQLALKLRQVWGK 362
            QQVV+LS+ +GP+YLVL+AKAR EFLSA++EA +M F NPA+RRSVTQLA+KL Q+WGK
Sbjct: 770  QQVVDLSTIHGPNYLVLSAKARREFLSAVEEAVNMEFPNPAERRSVTQLAMKLHQLWGK 828


>ref|XP_002266058.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
            vinifera]
          Length = 838

 Score =  169 bits (428), Expect = 3e-40
 Identities = 79/120 (65%), Positives = 104/120 (86%)
 Frame = +3

Query: 6    LDSAFVEVLCSGDDLTLIELLDRTGPVLERLSHETVGEILSTLAAHILDQKYLGSIIPWL 185
            ++SA+VE LCSGD+L L+ELLDRTGPVLE LSH+TV +IL  LA++ L+Q+++ S+IPWL
Sbjct: 710  IESAYVEALCSGDELVLVELLDRTGPVLECLSHKTVNDILCILASYFLEQRFMNSVIPWL 769

Query: 186  QQVVELSSTYGPDYLVLTAKARMEFLSAIQEAASMNFSNPADRRSVTQLALKLRQVWGKF 365
            QQVV+LS+ +GP+YLVL+AKAR EFLSA++EA +M F NPA+RRSVTQLA+KL Q+W  F
Sbjct: 770  QQVVDLSTIHGPNYLVLSAKARREFLSAVEEAVNMEFPNPAERRSVTQLAMKLHQLWVTF 829


>ref|NP_178730.2| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
            thaliana] gi|330250943|gb|AEC06037.1|
            armadillo/beta-catenin-like repeat-containing protein
            [Arabidopsis thaliana]
          Length = 820

 Score =  145 bits (365), Expect = 6e-33
 Identities = 66/119 (55%), Positives = 100/119 (84%)
 Frame = +3

Query: 6    LDSAFVEVLCSGDDLTLIELLDRTGPVLERLSHETVGEILSTLAAHILDQKYLGSIIPWL 185
            ++S +++VL SGD+L L+ELLDRTGPVLE +S +T+ EILS L +++L+++++ SI+PWL
Sbjct: 700  VESEYLQVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRFMNSILPWL 759

Query: 186  QQVVELSSTYGPDYLVLTAKARMEFLSAIQEAASMNFSNPADRRSVTQLALKLRQVWGK 362
             QV +LS+T G +YL+ +A+ R + LSAIQEA+ M+FSN A+RR+VTQ+A+KLR++WGK
Sbjct: 760  HQVADLSTTNGANYLIPSARKRAQVLSAIQEASGMDFSNLAERRAVTQIAMKLRKLWGK 818


>ref|XP_002883759.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329599|gb|EFH60018.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 800

 Score =  145 bits (365), Expect = 6e-33
 Identities = 66/119 (55%), Positives = 100/119 (84%)
 Frame = +3

Query: 6    LDSAFVEVLCSGDDLTLIELLDRTGPVLERLSHETVGEILSTLAAHILDQKYLGSIIPWL 185
            ++S +++VL SGD+L L+ELLDRTGPVLE +S +T+ EILS L +++L+++++ SI+PWL
Sbjct: 661  VESEYLDVLSSGDELALVELLDRTGPVLESMSSQTINEILSILLSYLLERRFMNSILPWL 720

Query: 186  QQVVELSSTYGPDYLVLTAKARMEFLSAIQEAASMNFSNPADRRSVTQLALKLRQVWGK 362
             QV +LS+T G +YL+ +A+ R + LSAIQEA+ M+FSN A+RR+VTQ+A+KLR++WGK
Sbjct: 721  HQVADLSTTNGANYLIPSARKRAQVLSAIQEASGMDFSNLAERRAVTQIAMKLRKLWGK 779


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