BLASTX nr result
ID: Cimicifuga21_contig00009994
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00009994
(1952 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi... 640 0.0
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera] 640 0.0
emb|CBI29649.3| unnamed protein product [Vitis vinifera] 635 e-179
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 620 e-175
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 619 e-175
>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Vitis vinifera]
Length = 627
Score = 640 bits (1651), Expect = 0.0
Identities = 334/563 (59%), Positives = 398/563 (70%), Gaps = 25/563 (4%)
Frame = +3
Query: 327 IEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSSLVGPRLNLHNRVQSLIRGGDLDAASATA 506
IEPPLH STS+LVGPRLNLHNRVQSLIR GDLD ASATA
Sbjct: 64 IEPPLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATA 123
Query: 507 RQAVFSNTRPTVFTCNAIIASMYRADRYNEAIGLFQFFFNQSNIVPNIVSYNNLINTYCD 686
RQ+VFSNTRPTVFTCNAIIA+MYR R+++AI LFQFFFNQSNIVPNIVSYN LINT+CD
Sbjct: 124 RQSVFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCD 183
Query: 687 TGRVDTALDVYSHIMANAPFSPSPVSYRHLTKGLIDAGRIEDAINLLREMLTKGHGADSL 866
GRVD LD+Y HI+ANAPFSPSPV+YRHLTKGLID+GRI +A++LLREML KGHGADSL
Sbjct: 184 AGRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSL 243
Query: 867 VYNNLISGFLNQGNLERANELFEELCGRCQVYDGVVNATFMDWFFNKGMDKEAMESYQGL 1046
VYNNLISGFLN N +A ELF+EL RC VYDGVVN TFMDW+F KG +K AM+SY+ L
Sbjct: 244 VYNNLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSL 303
Query: 1047 LDRGFQMTPITCNVLLGVLLKHGKSAEANALFERMLNNHKPPNTHAVNGETYSIMVNECF 1226
LDR F+MTP+TCN LL VLLKH K AEA ALF++ML+NH PPN AVN +++S+MVNEC
Sbjct: 304 LDRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECV 363
Query: 1227 RLGKFSEALAVFRQIGTGQGAKPFQMDGAGYNNMIDKLCEHGMVAEADNLFQEMCKKQVI 1406
+LGKF+EA+ VF+++G QG+KPF MD AGYNN+I + CE+G+++EA+ LF E+ K +
Sbjct: 364 KLGKFTEAIEVFKKVGKKQGSKPFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLT 423
Query: 1407 MDYNTYRFLIEAYFKEERVDDILQKINGFLFESNLKANPRFFNMVFGGLLDKGRIEEVTG 1586
D N YR IEAYF ER DD LQ N F+ +S L+ F N VF L++KG+ E
Sbjct: 424 PDVNIYRTFIEAYFGMERADDALQMFNRFV-DSGLRVIVSFANKVFDELVNKGKAGECVP 482
Query: 1587 IFGRMGDRDVKPDPSTYELVITVLCKEGKLDSSRDLLGQMVRYNVAVTPMLRSSLEEAFG 1766
+ +MG++D KPDP+TYE+VI LCKE D+SRDL+GQMVRYN+ VTP LR + EAFG
Sbjct: 483 VLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFG 542
Query: 1767 KEGRIDEIERLL--------------------GRPHQAREKPFAHAPQEAKVGAFAHAPH 1886
KEGR +EIERLL G P A A PQ A+ A P
Sbjct: 543 KEGRSEEIERLLEANRPGFGAYWPPSGPPRMAGPPRMAGPPRMAGPPQMAEPPRMAGPPQ 602
Query: 1887 QAR-----EGTFAREPPAATNQA 1940
A E + EPP QA
Sbjct: 603 MAEPPRMAESSRMEEPPQMAGQA 625
>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 640 bits (1651), Expect = 0.0
Identities = 334/563 (59%), Positives = 398/563 (70%), Gaps = 25/563 (4%)
Frame = +3
Query: 327 IEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSSLVGPRLNLHNRVQSLIRGGDLDAASATA 506
IEPPLH STS+LVGPRLNLHNRVQSLIR GDLD ASATA
Sbjct: 64 IEPPLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATA 123
Query: 507 RQAVFSNTRPTVFTCNAIIASMYRADRYNEAIGLFQFFFNQSNIVPNIVSYNNLINTYCD 686
RQ+VFSNTRPTVFTCNAIIA+MYR R+++AI LFQFFFNQSNIVPNIVSYN LINT+CD
Sbjct: 124 RQSVFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCD 183
Query: 687 TGRVDTALDVYSHIMANAPFSPSPVSYRHLTKGLIDAGRIEDAINLLREMLTKGHGADSL 866
GRVD LD+Y HI+ANAPFSPSPV+YRHLTKGLID+GRI +A++LLREML KGHGADSL
Sbjct: 184 AGRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSL 243
Query: 867 VYNNLISGFLNQGNLERANELFEELCGRCQVYDGVVNATFMDWFFNKGMDKEAMESYQGL 1046
VYNNLISGFLN N +A ELF+EL RC VYDGVVN TFMDW+F KG +K AM+SY+ L
Sbjct: 244 VYNNLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSL 303
Query: 1047 LDRGFQMTPITCNVLLGVLLKHGKSAEANALFERMLNNHKPPNTHAVNGETYSIMVNECF 1226
LDR F+MTP+TCN LL VLLKH K AEA ALF++ML+NH PPN AVN +++S+MVNEC
Sbjct: 304 LDRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECV 363
Query: 1227 RLGKFSEALAVFRQIGTGQGAKPFQMDGAGYNNMIDKLCEHGMVAEADNLFQEMCKKQVI 1406
+LGKF+EA+ VF+++G QG+KPF MD AGYNN+I + CE+G+++EA+ LF E+ K +
Sbjct: 364 KLGKFTEAIEVFKKVGKKQGSKPFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLT 423
Query: 1407 MDYNTYRFLIEAYFKEERVDDILQKINGFLFESNLKANPRFFNMVFGGLLDKGRIEEVTG 1586
D N YR IEAYF ER DD LQ N F+ +S L+ F N VF L++KG+ E
Sbjct: 424 PDVNIYRTFIEAYFGMERADDALQMFNRFV-DSGLRVIVSFANKVFDELVNKGKAGECVP 482
Query: 1587 IFGRMGDRDVKPDPSTYELVITVLCKEGKLDSSRDLLGQMVRYNVAVTPMLRSSLEEAFG 1766
+ +MG++D KPDP+TYE+VI LCKE D+SRDL+GQMVRYN+ VTP LR + EAFG
Sbjct: 483 VLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFG 542
Query: 1767 KEGRIDEIERLL--------------------GRPHQAREKPFAHAPQEAKVGAFAHAPH 1886
KEGR +EIERLL G P A A PQ A+ A P
Sbjct: 543 KEGRSEEIERLLEANRPGFGAYWPPSGPPRMAGPPRMAGPPXMAGPPQMAEPPXMAGPPX 602
Query: 1887 QAR-----EGTFAREPPAATNQA 1940
A E + EPP QA
Sbjct: 603 MAEPPRMAESSRMEEPPQMAGQA 625
>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 635 bits (1638), Expect = e-179
Identities = 318/492 (64%), Positives = 380/492 (77%)
Frame = +3
Query: 327 IEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSSLVGPRLNLHNRVQSLIRGGDLDAASATA 506
IEPPLH STS+LVGPRLNLHNRVQSLIR GDLD ASATA
Sbjct: 64 IEPPLHALRRDPSAPRPRPDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDLASATA 123
Query: 507 RQAVFSNTRPTVFTCNAIIASMYRADRYNEAIGLFQFFFNQSNIVPNIVSYNNLINTYCD 686
RQ+VFSNTRPTVFTCNAIIA+MYR R+++AI LFQFFFNQSNIVPNIVSYN LINT+CD
Sbjct: 124 RQSVFSNTRPTVFTCNAIIAAMYRNKRFDDAIALFQFFFNQSNIVPNIVSYNVLINTHCD 183
Query: 687 TGRVDTALDVYSHIMANAPFSPSPVSYRHLTKGLIDAGRIEDAINLLREMLTKGHGADSL 866
GRVD LD+Y HI+ANAPFSPSPV+YRHLTKGLID+GRI +A++LLREML KGHGADSL
Sbjct: 184 AGRVDVGLDIYRHILANAPFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSL 243
Query: 867 VYNNLISGFLNQGNLERANELFEELCGRCQVYDGVVNATFMDWFFNKGMDKEAMESYQGL 1046
VYNNLISGFLN N +A ELF+EL RC VYDGVVN TFMDW+F KG +K AM+SY+ L
Sbjct: 244 VYNNLISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSL 303
Query: 1047 LDRGFQMTPITCNVLLGVLLKHGKSAEANALFERMLNNHKPPNTHAVNGETYSIMVNECF 1226
LDR F+MTP+TCN LL VLLKH K AEA ALF++ML+NH PPN AVN +++S+MVNEC
Sbjct: 304 LDRQFRMTPVTCNALLEVLLKHDKKAEAWALFDQMLDNHTPPNFQAVNSDSFSVMVNECV 363
Query: 1227 RLGKFSEALAVFRQIGTGQGAKPFQMDGAGYNNMIDKLCEHGMVAEADNLFQEMCKKQVI 1406
+LGKF+EA+ VF+++G QG+KPF MD AGYNN+I + CE+G+++EA+ LF E+ K +
Sbjct: 364 KLGKFTEAIEVFKKVGKKQGSKPFAMDVAGYNNIIARFCENGLLSEAEQLFGELSTKSLT 423
Query: 1407 MDYNTYRFLIEAYFKEERVDDILQKINGFLFESNLKANPRFFNMVFGGLLDKGRIEEVTG 1586
D N YR IEAYF ER DD LQ N F+ +S L+ F N VF L++KG+ E
Sbjct: 424 PDVNIYRTFIEAYFGMERADDALQMFNRFV-DSGLRVIVSFANKVFDELVNKGKAGECVP 482
Query: 1587 IFGRMGDRDVKPDPSTYELVITVLCKEGKLDSSRDLLGQMVRYNVAVTPMLRSSLEEAFG 1766
+ +MG++D KPDP+TYE+VI LCKE D+SRDL+GQMVRYN+ VTP LR + EAFG
Sbjct: 483 VLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFG 542
Query: 1767 KEGRIDEIERLL 1802
KEGR +EIERLL
Sbjct: 543 KEGRSEEIERLL 554
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Cucumis sativus]
Length = 871
Score = 620 bits (1600), Expect = e-175
Identities = 311/492 (63%), Positives = 377/492 (76%)
Frame = +3
Query: 327 IEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSSLVGPRLNLHNRVQSLIRGGDLDAASATA 506
IEPPLH STS+LVGPRLNLHNRVQSLIR GDLDAAS+ A
Sbjct: 47 IEPPLHALRRDNYPPPQRDPNAPRLPD-STSALVGPRLNLHNRVQSLIRAGDLDAASSVA 105
Query: 507 RQAVFSNTRPTVFTCNAIIASMYRADRYNEAIGLFQFFFNQSNIVPNIVSYNNLINTYCD 686
R +VFSNTRPTVFTCNAIIA+MYRA RY++AI LFQFFFNQSNIVPN+VSYNNLIN +CD
Sbjct: 106 RHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCD 165
Query: 687 TGRVDTALDVYSHIMANAPFSPSPVSYRHLTKGLIDAGRIEDAINLLREMLTKGHGADSL 866
GRVD L+VY HI+ANAPFSPS V+YRHLTKGLIDAGRIE+A++LLREML KGHGADSL
Sbjct: 166 EGRVDVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSL 225
Query: 867 VYNNLISGFLNQGNLERANELFEELCGRCQVYDGVVNATFMDWFFNKGMDKEAMESYQGL 1046
V+NNLISGFLN GNLE+ANELF+EL RC VYDGVVNATFMDWFFN+G +KEAMESY+ L
Sbjct: 226 VFNNLISGFLNLGNLEKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSL 285
Query: 1047 LDRGFQMTPITCNVLLGVLLKHGKSAEANALFERMLNNHKPPNTHAVNGETYSIMVNECF 1226
LDR F+M P TCNVLL VLLKH K EA LF++ML+NH PPN AVN +T++IMVNECF
Sbjct: 286 LDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECF 345
Query: 1227 RLGKFSEALAVFRQIGTGQGAKPFQMDGAGYNNMIDKLCEHGMVAEADNLFQEMCKKQVI 1406
+ GKF+EA+ FR++GT ++PF MD AGYNN+I + CE GM+A+A+ F E+C K +
Sbjct: 346 KHGKFAEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLS 405
Query: 1407 MDYNTYRFLIEAYFKEERVDDILQKINGFLFESNLKANPRFFNMVFGGLLDKGRIEEVTG 1586
D T+R LIE+Y K E++DD L+ N + + L+ F NMVFG L+ G+ +
Sbjct: 406 PDVPTHRTLIESYLKIEQIDDALRVFNR-MVDVGLRVVASFGNMVFGELIKNGKAADCAQ 464
Query: 1587 IFGRMGDRDVKPDPSTYELVITVLCKEGKLDSSRDLLGQMVRYNVAVTPMLRSSLEEAFG 1766
I +MG+RD KPDP+ Y++VI LC EG LD+SR+LL Q++RY + +TP L ++EAF
Sbjct: 465 ILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAFV 524
Query: 1767 KEGRIDEIERLL 1802
K GR +EIERLL
Sbjct: 525 KAGRHEEIERLL 536
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 619 bits (1597), Expect = e-175
Identities = 310/492 (63%), Positives = 377/492 (76%)
Frame = +3
Query: 327 IEPPLHXXXXXXXXXXXXXXXXXXXXXXSTSSLVGPRLNLHNRVQSLIRGGDLDAASATA 506
IEPPLH STS+LVGPRLNLHNRVQSLIR GDLDAAS+ A
Sbjct: 73 IEPPLHALRRDNYPPPQRDPNAPRLPD-STSALVGPRLNLHNRVQSLIRAGDLDAASSVA 131
Query: 507 RQAVFSNTRPTVFTCNAIIASMYRADRYNEAIGLFQFFFNQSNIVPNIVSYNNLINTYCD 686
R +VFSNTRPTVFTCNAIIA+MYRA RY++AI LFQFFFNQSNIVPN+VSYNNLIN +CD
Sbjct: 132 RHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCD 191
Query: 687 TGRVDTALDVYSHIMANAPFSPSPVSYRHLTKGLIDAGRIEDAINLLREMLTKGHGADSL 866
GRVD L+VY HI+ANAPFSPS V+YRHLTKGLIDAGRIE+A++LLREML KGHGADSL
Sbjct: 192 EGRVDVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVDLLREMLNKGHGADSL 251
Query: 867 VYNNLISGFLNQGNLERANELFEELCGRCQVYDGVVNATFMDWFFNKGMDKEAMESYQGL 1046
V+NNLISGFLN GNL +ANELF+EL RC VYDGVVNATFMDWFFN+G +KEAMESY+ L
Sbjct: 252 VFNNLISGFLNLGNLVKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSL 311
Query: 1047 LDRGFQMTPITCNVLLGVLLKHGKSAEANALFERMLNNHKPPNTHAVNGETYSIMVNECF 1226
LDR F+M P TCNVLL VLLKH K EA LF++ML+NH PPN AVN +T++IMVNECF
Sbjct: 312 LDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECF 371
Query: 1227 RLGKFSEALAVFRQIGTGQGAKPFQMDGAGYNNMIDKLCEHGMVAEADNLFQEMCKKQVI 1406
+LGKF+EA+ FR++GT ++PF MD AGYNN+I + CE GM+A+A+ F E+C K +
Sbjct: 372 KLGKFTEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMADAETFFAELCSKSLS 431
Query: 1407 MDYNTYRFLIEAYFKEERVDDILQKINGFLFESNLKANPRFFNMVFGGLLDKGRIEEVTG 1586
D T+R LIE+Y K E++DD L+ N + + L+ F NMVFG L+ G+ +
Sbjct: 432 PDVPTHRTLIESYLKIEQIDDALRVFNR-MVDVGLRVVASFGNMVFGELIKNGKAADCAQ 490
Query: 1587 IFGRMGDRDVKPDPSTYELVITVLCKEGKLDSSRDLLGQMVRYNVAVTPMLRSSLEEAFG 1766
I +MG+RD KPDP+ Y++VI LC EG LD+SR+LL Q++RY + +TP L +++AF
Sbjct: 491 ILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIGLTPTLEEFVKDAFV 550
Query: 1767 KEGRIDEIERLL 1802
K GR +EIERLL
Sbjct: 551 KAGRHEEIERLL 562