BLASTX nr result

ID: Cimicifuga21_contig00009900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009900
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...   136   6e-30
ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...   133   5e-29
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...   125   1e-26
ref|XP_002534155.1| chaperone protein DNAj, putative [Ricinus co...   105   8e-21
ref|XP_002460134.1| hypothetical protein SORBIDRAFT_02g023200 [S...   105   1e-20

>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  136 bits (342), Expect = 6e-30
 Identities = 79/145 (54%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
 Frame = +2

Query: 50  MDISGHLSPKSVQ---IFSRSRSMKKTSQFNLISCKALTLENQ-GVSTNLYEVLSLESKN 217
           M++S  +SP++     I  +  S +K+ +   I CK  T E       N YEVLSL S+N
Sbjct: 1   MEMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQN 60

Query: 218 VGFDEIKKAYRSMARQYHPDVVTPSRKEESTKKFVELQQAYETLSNPISRQKYDSGINGM 397
           VGFDEIKKAYRSMA QYHPDV  PS KEESTK+FVELQ+AYETLS+PI+R+ YD  + G+
Sbjct: 61  VGFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLEL-GL 119

Query: 398 QSEESDTYFYRDVWEDQLSGLRLRS 472
            SE+    F R+VWE QL GL  RS
Sbjct: 120 PSEDRKNSFPREVWERQLHGLYQRS 144


>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  133 bits (334), Expect = 5e-29
 Identities = 79/155 (50%), Positives = 98/155 (63%), Gaps = 14/155 (9%)
 Frame = +2

Query: 50  MDISGHLSPKSVQ---IFSRSRSMKKTSQFNLISCKALTLENQ-GVSTNLYEVLSLESKN 217
           M++S  +SP++     I  +  S +K+ +   I CK  T E       N YEVLSL S+N
Sbjct: 1   MEMSLQVSPRTANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQN 60

Query: 218 VGFDEIKKAYRSMARQYHPDVVTPSRKEESTKKFVELQQAYETLSNPISRQKYD------ 379
           VGFDEIKKAYRSMA QYHPDV  PS KEESTK+FVELQ+AYETLS+PI+R+ YD      
Sbjct: 61  VGFDEIKKAYRSMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGMV 120

Query: 380 ----SGINGMQSEESDTYFYRDVWEDQLSGLRLRS 472
                   G+ SE+  + F R+VWE QL GL  RS
Sbjct: 121 NSVGFAFEGLPSEDRKSSFPREVWERQLHGLYQRS 155


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score =  125 bits (313), Expect = 1e-26
 Identities = 71/135 (52%), Positives = 90/135 (66%), Gaps = 9/135 (6%)
 Frame = +2

Query: 98  RSRSMKKTSQFNLISCKALTLENQGVSTNLYEVLSLESKNVGFDEIKKAYRSMARQYHPD 277
           RSR     ++   I+C    ++ +   TN YEVLSL+SKNVGFDEI+KAYRSMA Q+HPD
Sbjct: 22  RSRQKGFHNKARTITCSYRIMQEK--KTNFYEVLSLQSKNVGFDEIRKAYRSMALQFHPD 79

Query: 278 VVTPSRKEESTKKFVELQQAYETLSNPISRQKYDSGINGMQS---------EESDTYFYR 430
           V   S KEESTK+FVELQ+AYETLS+P+SR+ YD  +N + S         EE    F +
Sbjct: 80  VCRLSAKEESTKRFVELQKAYETLSDPVSRRLYDYELNLVASIGLGLEIRMEERKNSFPK 139

Query: 431 DVWEDQLSGLRLRSN 475
           +VWE QL GL  RS+
Sbjct: 140 EVWEMQLYGLSQRSH 154


>ref|XP_002534155.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223525777|gb|EEF28227.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 173

 Score =  105 bits (263), Expect = 8e-21
 Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 7/130 (5%)
 Frame = +2

Query: 134 LISCKALTLENQGVSTNLYEVLSLESKNVGFDEIKKAYRSMARQYHPDVV--TPSRKEES 307
           LISCKA +       TNLY+VLSL  K    +EIKKAYR+MA +YHPDV       KEES
Sbjct: 31  LISCKATSTIIINNDTNLYKVLSLNPKESSLEEIKKAYRNMALRYHPDVCHGHSMTKEES 90

Query: 308 TKKFVELQQAYETLSNPISRQKYDSGI-----NGMQSEESDTYFYRDVWEDQLSGLRLRS 472
           T+ F+++Q+AY+TLS+P+ R++YD+G+      G ++  +D+   R+ W DQL  L++RS
Sbjct: 91  TEMFLQVQKAYKTLSDPVLREEYDNGLLMGMTRGFRASRNDSLATRNRWRDQLVELKIRS 150

Query: 473 NGKNGTKKRE 502
             KN   +RE
Sbjct: 151 --KNRMAQRE 158


>ref|XP_002460134.1| hypothetical protein SORBIDRAFT_02g023200 [Sorghum bicolor]
           gi|241923511|gb|EER96655.1| hypothetical protein
           SORBIDRAFT_02g023200 [Sorghum bicolor]
          Length = 169

 Score =  105 bits (262), Expect = 1e-20
 Identities = 60/128 (46%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
 Frame = +2

Query: 140 SCKALTLENQGVSTNLYEVLSLE-SKNVGFDEIKKAYRSMARQYHPDVVTPSRKEESTKK 316
           S +A +  ++G  T+ Y+VLSLE S  VG +EIK+AYR +A +YHPDV  PSR+ EST+ 
Sbjct: 41  SPRAHSFCSEGSMTDYYKVLSLEHSAAVGAEEIKRAYRRLALRYHPDVCPPSRRGESTEL 100

Query: 317 FVELQQAYETLSNPISRQKYDSGIN-GMQSEESDTYFYRDVWEDQLSGLRLRS----NGK 481
           F+EL++AYETLS+P  R +YD+ +  G +   +   F RDVWE QL  LR RS    + +
Sbjct: 101 FLELRRAYETLSDPAQRLRYDAELRAGGEDPAAGVAFARDVWEAQLCALRARSEQRQSAR 160

Query: 482 NGTKKREP 505
           +G  +R+P
Sbjct: 161 SGGVRRQP 168


Top