BLASTX nr result

ID: Cimicifuga21_contig00009896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009896
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   191   5e-47
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   189   2e-46
ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_004140923.1| PREDICTED: transcription factor GAMYB-like [...   174   5e-42

>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/122 (74%), Positives = 97/122 (79%)
 Frame = +2

Query: 143 MSSTTTESEDGTFSKDQADSPSFDEXXXXXXXXXXXXXXXXPWTSAEDAILVDYVKKHGE 322
           MS TT ES+DG FSKD+ DSP  +                 PWTSAEDAIL++YVKKHGE
Sbjct: 1   MSHTTNESDDGLFSKDRIDSPLAEGGNCGGSANGGAMLKKGPWTSAEDAILIEYVKKHGE 60

Query: 323 GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEHLIIELHAKMGNKWARMAA 502
           GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFT EEE LIIELHAKMGNKWARMAA
Sbjct: 61  GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTQEEEQLIIELHAKMGNKWARMAA 120

Query: 503 HV 508
           H+
Sbjct: 121 HL 122


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  189 bits (480), Expect = 2e-46
 Identities = 91/122 (74%), Positives = 95/122 (77%)
 Frame = +2

Query: 143 MSSTTTESEDGTFSKDQADSPSFDEXXXXXXXXXXXXXXXXPWTSAEDAILVDYVKKHGE 322
           MS  T ESEDG  SKDQ  SP  DE                PWTS+EDAILV+YVKKHGE
Sbjct: 1   MSHLTNESEDGMLSKDQTGSPLIDEGNSSGSAGGGIVLKKGPWTSSEDAILVEYVKKHGE 60

Query: 323 GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEHLIIELHAKMGNKWARMAA 502
           GNWNAVQKHSGL RCGKSCRLRWANHLRPNLKKGAFT+EEE LIIELHAKMGNKWARMAA
Sbjct: 61  GNWNAVQKHSGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIELHAKMGNKWARMAA 120

Query: 503 HV 508
           H+
Sbjct: 121 HL 122


>ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|222842254|gb|EEE79801.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score =  182 bits (461), Expect = 3e-44
 Identities = 89/122 (72%), Positives = 94/122 (77%)
 Frame = +2

Query: 143 MSSTTTESEDGTFSKDQADSPSFDEXXXXXXXXXXXXXXXXPWTSAEDAILVDYVKKHGE 322
           MS TT+ESEDG  SKDQ   P   E                PWTSAEDAIL++YVKKHGE
Sbjct: 1   MSRTTSESEDGMISKDQTGLP-LGEEGSYGGSTNGVVLKKGPWTSAEDAILIEYVKKHGE 59

Query: 323 GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEHLIIELHAKMGNKWARMAA 502
           GNWN+VQKHSGL RCGKSCRLRWANHLRPNLKKGAFT EEE LIIELHAKMGNKWARMAA
Sbjct: 60  GNWNSVQKHSGLFRCGKSCRLRWANHLRPNLKKGAFTHEEEQLIIELHAKMGNKWARMAA 119

Query: 503 HV 508
           H+
Sbjct: 120 HL 121


>ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|222844961|gb|EEE82508.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/122 (72%), Positives = 94/122 (77%)
 Frame = +2

Query: 143 MSSTTTESEDGTFSKDQADSPSFDEXXXXXXXXXXXXXXXXPWTSAEDAILVDYVKKHGE 322
           MS  T+ESEDG  S +Q +SP   E                PWTSAEDAIL++YVKKHGE
Sbjct: 1   MSRMTSESEDGIVSNNQIESP-LGEEGNYCGSANGGVLKKGPWTSAEDAILIEYVKKHGE 59

Query: 323 GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEHLIIELHAKMGNKWARMAA 502
           GNWNAVQKHSGL RCGKSCRLRWANHLRPNLKKGAFT EEE LIIELHAKMGNKWARMAA
Sbjct: 60  GNWNAVQKHSGLFRCGKSCRLRWANHLRPNLKKGAFTQEEEQLIIELHAKMGNKWARMAA 119

Query: 503 HV 508
           H+
Sbjct: 120 HL 121


>ref|XP_004140923.1| PREDICTED: transcription factor GAMYB-like [Cucumis sativus]
           gi|449520631|ref|XP_004167337.1| PREDICTED:
           transcription factor GAMYB-like [Cucumis sativus]
          Length = 552

 Score =  174 bits (442), Expect = 5e-42
 Identities = 86/122 (70%), Positives = 91/122 (74%)
 Frame = +2

Query: 143 MSSTTTESEDGTFSKDQADSPSFDEXXXXXXXXXXXXXXXXPWTSAEDAILVDYVKKHGE 322
           M     E ED   S+DQ  SP  DE                PWTSAED IL++YVKKHGE
Sbjct: 1   MRHPKNEIEDNLPSQDQTLSPLLDEDSGGNASGIILKKG--PWTSAEDEILIEYVKKHGE 58

Query: 323 GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEHLIIELHAKMGNKWARMAA 502
           GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFT+EEEHLIIELHAKMGNKWARMA 
Sbjct: 59  GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEEHLIIELHAKMGNKWARMAG 118

Query: 503 HV 508
           H+
Sbjct: 119 HL 120


Top