BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009890
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   148   5e-34
ref|XP_001755347.1| predicted protein [Physcomitrella patens sub...   147   7e-34
ref|NP_001131392.1| uncharacterized protein LOC100192719 [Zea ma...   147   1e-33
ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...   146   2e-33
gb|AFK41314.1| unknown [Lotus japonicus]                              146   2e-33

>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +2

Query: 50  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 229
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 230 NNVLYISTTKRT 265
           NNVLYISTTKRT
Sbjct: 75  NNVLYISTTKRT 86


>ref|XP_001755347.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162693475|gb|EDQ79827.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 91

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = +2

Query: 50  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 229
           PADFLKSIRGRPVVVKLNSGVDYRG+LACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 17  PADFLKSIRGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 76

Query: 230 NNVLYISTTKRT 265
           NNVLYISTTKRT
Sbjct: 77  NNVLYISTTKRT 88


>ref|NP_001131392.1| uncharacterized protein LOC100192719 [Zea mays]
           gi|194691404|gb|ACF79786.1| unknown [Zea mays]
           gi|195605878|gb|ACG24769.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413918138|gb|AFW58070.1| Small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 95

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = +2

Query: 50  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 229
           P+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 19  PSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 78

Query: 230 NNVLYISTTKRT 265
           NNVLYISTTKRT
Sbjct: 79  NNVLYISTTKRT 90


>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = +2

Query: 50  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 229
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 15  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 230 NNVLYISTTKRT 265
           NNVLYIST+KRT
Sbjct: 75  NNVLYISTSKRT 86


>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = +2

Query: 50  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 229
           PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG
Sbjct: 14  PADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 73

Query: 230 NNVLYISTTKRT 265
           NNVLYIST+KRT
Sbjct: 74  NNVLYISTSKRT 85