BLASTX nr result

ID: Cimicifuga21_contig00009885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009885
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloro...   204   4e-67
ref|XP_004142104.1| PREDICTED: thioredoxin-like protein AAED1, c...   196   2e-65
ref|XP_002525198.1| conserved hypothetical protein [Ricinus comm...   192   1e-63
ref|XP_002326159.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-62
gb|AFK45062.1| unknown [Lotus japonicus]                              188   2e-62

>ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis
           vinifera] gi|297741495|emb|CBI32627.3| unnamed protein
           product [Vitis vinifera] gi|342160850|gb|AEL16461.1|
           type II peroxiredoxin 2 [Vitis vinifera]
          Length = 254

 Score =  204 bits (518), Expect(2) = 4e-67
 Identities = 105/185 (56%), Positives = 131/185 (70%), Gaps = 1/185 (0%)
 Frame = +2

Query: 314 MATPLHMTPLIDTIHSNKNN-LHTPFIQKTPHFSINLEDGHRQSRFPPRRDRITVSAISS 490
           MA  L  T L +TI   +   L +P + +   FS++    +        R  IT SA S 
Sbjct: 1   MAISLSTTILPNTIQRRRITILPSPRVSRNLGFSLSFRPCNESIELSSSRRVITASAASG 60

Query: 491 SPGNVAPFISEDTPNLLNKVNVFDLNGRAIVISDLWQDRRAVVAFARHFGCVLCRKRADY 670
           SPG  +  +S+DT NLL++  VFDLNG  I ISDLW+DR+AVVAFARHFGCV CRKRAD 
Sbjct: 61  SPGIESSTVSDDTTNLLDRAQVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCRKRADL 120

Query: 671 LATAKDKLDAAGVALILIGPGSVEQANAFTEQTGFKGEVYADPSHSSYEAFSFVSGISTT 850
           LA+ KD++DA+GVAL+LIGPGS++QA AF+EQT FKGEVYADPSHSSYE   FVSG+ +T
Sbjct: 121 LASQKDRMDASGVALVLIGPGSIDQAKAFSEQTNFKGEVYADPSHSSYEVLGFVSGVLST 180

Query: 851 FTPKA 865
           FTP+A
Sbjct: 181 FTPQA 185



 Score = 79.0 bits (193), Expect(2) = 4e-67
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +1

Query: 928  QQGGIIVAGPGKNNISYIHKDKEAGDDPDIKDILEACCS 1044
            QQGGIIVAGPGK+NISYIHKDKEAGDDPD++DIL ACCS
Sbjct: 216  QQGGIIVAGPGKSNISYIHKDKEAGDDPDMEDILTACCS 254


>ref|XP_004142104.1| PREDICTED: thioredoxin-like protein AAED1, chloroplastic-like
           [Cucumis sativus] gi|449521503|ref|XP_004167769.1|
           PREDICTED: thioredoxin-like protein AAED1,
           chloroplastic-like [Cucumis sativus]
          Length = 258

 Score =  196 bits (498), Expect(2) = 2e-65
 Identities = 98/141 (69%), Positives = 114/141 (80%)
 Frame = +2

Query: 443 RFPPRRDRITVSAISSSPGNVAPFISEDTPNLLNKVNVFDLNGRAIVISDLWQDRRAVVA 622
           R   RR  + VSAIS SPG  +   S +T +LL  V VFDLNG  I ISDLW+DR+AVVA
Sbjct: 49  RLSLRRTGVVVSAISGSPGIGSYVESGNTADLLESVKVFDLNGNGIPISDLWKDRKAVVA 108

Query: 623 FARHFGCVLCRKRADYLATAKDKLDAAGVALILIGPGSVEQANAFTEQTGFKGEVYADPS 802
           FARHFGCV CRKRADYLA+ KD LDA+GVAL+LIGPGS++QA AF+EQT F+GEVYADP+
Sbjct: 109 FARHFGCVFCRKRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPA 168

Query: 803 HSSYEAFSFVSGISTTFTPKA 865
           HSSYEA +FVSG +TTFTPKA
Sbjct: 169 HSSYEALNFVSGFTTTFTPKA 189



 Score = 81.3 bits (199), Expect(2) = 2e-65
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = +1

Query: 928  QQGGIIVAGPGKNNISYIHKDKEAGDDPDIKDILEACCS 1044
            QQGGIIVAGPGKNNISYIHKDKEAGDDPDI++IL+ACCS
Sbjct: 220  QQGGIIVAGPGKNNISYIHKDKEAGDDPDIQEILKACCS 258


>ref|XP_002525198.1| conserved hypothetical protein [Ricinus communis]
           gi|223535495|gb|EEF37164.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  192 bits (487), Expect(2) = 1e-63
 Identities = 106/179 (59%), Positives = 123/179 (68%), Gaps = 14/179 (7%)
 Frame = +2

Query: 371 NLHTPFIQKTPHFSINLEDGHRQSRFPP-------------RRDRITVSAISSSPG-NVA 508
           +L+  F    P F+     G+R S  PP             R+  I  SAIS SPG   +
Sbjct: 5   SLNIAFSPNIPKFNSATTTGNRTSFTPPFLANRQCYRLLQTRQKHIVCSAISGSPGIESS 64

Query: 509 PFISEDTPNLLNKVNVFDLNGRAIVISDLWQDRRAVVAFARHFGCVLCRKRADYLATAKD 688
             ++ED   LL+ V V DL G  I ISDLW+DR+AVVAFARHFGCVLCRKRADYLA  KD
Sbjct: 65  GLVNED---LLDTVKVLDLGGNEIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKD 121

Query: 689 KLDAAGVALILIGPGSVEQANAFTEQTGFKGEVYADPSHSSYEAFSFVSGISTTFTPKA 865
            +DA+GVAL+LIGPGSV+QA  F+EQT FKGEVYAD SHSSYEAF FVSG+STTFTPKA
Sbjct: 122 IMDASGVALVLIGPGSVDQAKTFSEQTKFKGEVYADTSHSSYEAFQFVSGVSTTFTPKA 180



 Score = 79.0 bits (193), Expect(2) = 1e-63
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +1

Query: 928  QQGGIIVAGPGKNNISYIHKDKEAGDDPDIKDILEACCS 1044
            +QGGIIVAGPGK NISYIHKDKEAGDDPDI+DIL+ACCS
Sbjct: 211  RQGGIIVAGPGKTNISYIHKDKEAGDDPDIEDILKACCS 249


>ref|XP_002326159.1| predicted protein [Populus trichocarpa] gi|222833352|gb|EEE71829.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  190 bits (482), Expect(2) = 1e-62
 Identities = 90/117 (76%), Positives = 103/117 (88%)
 Frame = +2

Query: 515 ISEDTPNLLNKVNVFDLNGRAIVISDLWQDRRAVVAFARHFGCVLCRKRADYLATAKDKL 694
           +SEDT N+L+ V VFDLNG AI  SDLW+DR+AVVAFARHFGCVLCR+RADYLA  KD +
Sbjct: 16  VSEDTTNILDTVEVFDLNGNAIPFSDLWKDRKAVVAFARHFGCVLCRRRADYLAAKKDIM 75

Query: 695 DAAGVALILIGPGSVEQANAFTEQTGFKGEVYADPSHSSYEAFSFVSGISTTFTPKA 865
           DA+GVAL+LIGPGSV+QA  F+EQT FKGEVYADPSHSSY+A  FVSG+STTFTPKA
Sbjct: 76  DASGVALVLIGPGSVDQAKTFSEQTKFKGEVYADPSHSSYKALQFVSGVSTTFTPKA 132



 Score = 78.2 bits (191), Expect(2) = 1e-62
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = +1

Query: 928  QQGGIIVAGPGKNNISYIHKDKEAGDDPDIKDILEACC 1041
            QQGGIIVAGPGK NISYIHKDKEAGDDPDI+DI++ACC
Sbjct: 163  QQGGIIVAGPGKTNISYIHKDKEAGDDPDIEDIIKACC 200


>gb|AFK45062.1| unknown [Lotus japonicus]
          Length = 256

 Score =  188 bits (477), Expect(2) = 2e-62
 Identities = 102/175 (58%), Positives = 122/175 (69%), Gaps = 4/175 (2%)
 Frame = +2

Query: 353 IHSNKNNLHTPFIQKTPHFSIN----LEDGHRQSRFPPRRDRITVSAISSSPGNVAPFIS 520
           +H NKN    P +Q  P  S+N    L   +  +    R    T+   S+S G  +P +S
Sbjct: 16  LHLNKNTNQFP-LQAFPTSSLNQNLQLYSKNLLNLSTNRHHATTLP--SASAGVESPVLS 72

Query: 521 EDTPNLLNKVNVFDLNGRAIVISDLWQDRRAVVAFARHFGCVLCRKRADYLATAKDKLDA 700
           EDT   L+ V VFDLNG  I ISDLW+DR+AVVAFARHFGCVLCRKRADYLA  KD +DA
Sbjct: 73  EDTTGSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDLMDA 132

Query: 701 AGVALILIGPGSVEQANAFTEQTGFKGEVYADPSHSSYEAFSFVSGISTTFTPKA 865
           +GVAL+LIGPGSV+QA AF EQT F GE+YADP+H SYEA +FVSG+ TTFTP A
Sbjct: 133 SGVALVLIGPGSVDQAKAFAEQTKFGGEIYADPTHPSYEALNFVSGVLTTFTPNA 187



 Score = 79.0 bits (193), Expect(2) = 2e-62
 Identities = 34/39 (87%), Positives = 39/39 (100%)
 Frame = +1

Query: 928  QQGGIIVAGPGKNNISYIHKDKEAGDDPDIKDILEACCS 1044
            +QGGIIVAGPGKNNISY+HKDKEAGDDP+I+DIL+ACCS
Sbjct: 218  KQGGIIVAGPGKNNISYLHKDKEAGDDPEIEDILKACCS 256


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