BLASTX nr result

ID: Cimicifuga21_contig00009858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009858
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527167.1| conserved hypothetical protein [Ricinus comm...   286   7e-75
ref|XP_002285400.1| PREDICTED: uncharacterized protein LOC100250...   284   3e-74
ref|XP_003633082.1| PREDICTED: uncharacterized protein LOC100250...   283   4e-74
gb|ABK93674.1| unknown [Populus trichocarpa]                          282   1e-73
gb|ABK95835.1| unknown [Populus trichocarpa]                          282   1e-73

>ref|XP_002527167.1| conserved hypothetical protein [Ricinus communis]
           gi|223533432|gb|EEF35180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score =  286 bits (732), Expect = 7e-75
 Identities = 161/285 (56%), Positives = 199/285 (69%), Gaps = 8/285 (2%)
 Frame = -3

Query: 990 MSAIVVCGNKRSYFEDLQTNXXXXXXXXXXXXXXXXXXXXXPTASSDH-FNPFASPPLHH 814
           MSAIV CG KRS+FE+L                         + S    F+PF+S  L  
Sbjct: 1   MSAIV-CG-KRSFFEELPVTSPSTAAVVVSSKRIRCCSSPVRSFSPPRSFSPFSSK-LDK 57

Query: 813 LRTLFPAMDNQLLEKTLEECGNDLDTAIKRLTELRLGSSSAEAISDTEAERAHQP----- 649
           L  LFP MD Q++E+ LEECG+DLD+AI+ L ELRLGS++  +I++ ++    +      
Sbjct: 58  LFALFPLMDKQIIERALEECGDDLDSAIRSLNELRLGSAADNSINNLDSNNVVRSDLLLD 117

Query: 648 --LQNLTPIGGDGAPPFDDSSAPDNLPKDGSEWVELLVREMTDASNVDDAKARASRVLEF 475
             +Q    I    APP DD SA   LP DG+EWVEL V +M  ASN+DDA+ARASR LE 
Sbjct: 118 ANVQQGVTITNAEAPPTDDLSASSQLPMDGAEWVELFVNQMMSASNMDDARARASRALEA 177

Query: 474 LETSIRTRAGSEAAQNFQMENMMLKEQIEALLRENTILKRAVAIQHERQKEHDERSQELQ 295
           LE SI  RAG+E A++FQ ENMMLKEQ++AL++EN ILKRAV+IQHERQKE ++RSQELQ
Sbjct: 178 LEKSICARAGAETAKSFQQENMMLKEQVQALIQENAILKRAVSIQHERQKEFEDRSQELQ 237

Query: 294 HLKQLVSQYQEQLRTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 160
           HLKQLVSQYQ+QLR LEV+NYALT+HLKQAQQS+SIPGRFHPDVF
Sbjct: 238 HLKQLVSQYQDQLRALEVSNYALTMHLKQAQQSNSIPGRFHPDVF 282


>ref|XP_002285400.1| PREDICTED: uncharacterized protein LOC100250952 isoform 1 [Vitis
           vinifera] gi|297738994|emb|CBI28239.3| unnamed protein
           product [Vitis vinifera]
          Length = 283

 Score =  284 bits (726), Expect = 3e-74
 Identities = 169/286 (59%), Positives = 192/286 (67%), Gaps = 9/286 (3%)
 Frame = -3

Query: 990 MSAIVVCGNKRSYFEDLQTNXXXXXXXXXXXXXXXXXXXXXP-TASSDHFNPFASPP--L 820
           MSAIV CG KRS+FEDL T                        +AS       AS    L
Sbjct: 1   MSAIV-CG-KRSFFEDLPTTPPVSKRIRCSSSSPVRFSPPRSISASPSQSQSTASQASVL 58

Query: 819 HHLRTLFPAMDNQLLEKTLEECGNDLDTAIKRLTELRLGSSS-----AEAISDTEAERAH 655
            HLR LFP MD Q LEK LEECGNDLD+ IK L ELRLGS+          SD   E   
Sbjct: 59  DHLRALFPDMDKQFLEKALEECGNDLDSTIKSLNELRLGSAQNNLGFGAGTSDVGLETKV 118

Query: 654 Q-PLQNLTPIGGDGAPPFDDSSAPDNLPKDGSEWVELLVREMTDASNVDDAKARASRVLE 478
           Q   Q +    G+     +D SAP NL  DG+EWVEL VREM  ASN+DDA+ARASR LE
Sbjct: 119 QLQSQGVAATNGEVVSS-EDPSAPKNLSMDGAEWVELFVREMMSASNMDDARARASRALE 177

Query: 477 FLETSIRTRAGSEAAQNFQMENMMLKEQIEALLRENTILKRAVAIQHERQKEHDERSQEL 298
            LE SI  RA +EAAQ+F  EN+MLKEQ+EALL+EN ILKRAV+IQHERQKE +ER+QEL
Sbjct: 178 VLEKSICARASAEAAQSFHQENLMLKEQVEALLQENIILKRAVSIQHERQKESEERNQEL 237

Query: 297 QHLKQLVSQYQEQLRTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 160
           QHLKQ+V+QYQEQLRTLEVNNYAL++HL+QAQQSSSIPG FHPDVF
Sbjct: 238 QHLKQVVTQYQEQLRTLEVNNYALSMHLRQAQQSSSIPGHFHPDVF 283


>ref|XP_003633082.1| PREDICTED: uncharacterized protein LOC100250952 isoform 2 [Vitis
           vinifera]
          Length = 276

 Score =  283 bits (725), Expect = 4e-74
 Identities = 169/285 (59%), Positives = 192/285 (67%), Gaps = 8/285 (2%)
 Frame = -3

Query: 990 MSAIVVCGNKRSYFEDLQTNXXXXXXXXXXXXXXXXXXXXXP-TASSDHFNPFASPP--L 820
           MSAIV CG KRS+FEDL T                        +AS       AS    L
Sbjct: 1   MSAIV-CG-KRSFFEDLPTTPPVSKRIRCSSSSPVRFSPPRSISASPSQSQSTASQASVL 58

Query: 819 HHLRTLFPAMDNQLLEKTLEECGNDLDTAIKRLTELRLGSSS-----AEAISDTEAERAH 655
            HLR LFP MD Q LEK LEECGNDLD+ IK L ELRLGS+          SD   E   
Sbjct: 59  DHLRALFPDMDKQFLEKALEECGNDLDSTIKSLNELRLGSAQNNLGFGAGTSDVGLETKV 118

Query: 654 QPLQNLTPIGGDGAPPFDDSSAPDNLPKDGSEWVELLVREMTDASNVDDAKARASRVLEF 475
           Q LQ+   +  +      D SAP NL  DG+EWVEL VREM  ASN+DDA+ARASR LE 
Sbjct: 119 Q-LQSQEVVSSE------DPSAPKNLSMDGAEWVELFVREMMSASNMDDARARASRALEV 171

Query: 474 LETSIRTRAGSEAAQNFQMENMMLKEQIEALLRENTILKRAVAIQHERQKEHDERSQELQ 295
           LE SI  RA +EAAQ+F  EN+MLKEQ+EALL+EN ILKRAV+IQHERQKE +ER+QELQ
Sbjct: 172 LEKSICARASAEAAQSFHQENLMLKEQVEALLQENIILKRAVSIQHERQKESEERNQELQ 231

Query: 294 HLKQLVSQYQEQLRTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 160
           HLKQ+V+QYQEQLRTLEVNNYAL++HL+QAQQSSSIPG FHPDVF
Sbjct: 232 HLKQVVTQYQEQLRTLEVNNYALSMHLRQAQQSSSIPGHFHPDVF 276


>gb|ABK93674.1| unknown [Populus trichocarpa]
          Length = 286

 Score =  282 bits (722), Expect = 1e-73
 Identities = 161/289 (55%), Positives = 200/289 (69%), Gaps = 12/289 (4%)
 Frame = -3

Query: 990 MSAIVVCGNKRSYFEDLQTNXXXXXXXXXXXXXXXXXXXXXPT----ASSDHFN-----P 838
           MSAIV CG KRS+FE+L                         +    ++   FN      
Sbjct: 1   MSAIV-CG-KRSFFEELTVTSPPVSKRIRCSSSSPVRFSPPRSNTLASNPPSFNFGSSSS 58

Query: 837 FASPPLHHLRTLFPAMDNQLLEKTLEECGNDLDTAIKRLTELRLGSS---SAEAISDTEA 667
            +S  +  L  +FP MD QL+EK LEECG+DLD+AI+ L +LRLGS+   SA A      
Sbjct: 59  SSSTLIEQLAAIFPDMDKQLIEKVLEECGDDLDSAIRSLNDLRLGSAENFSAAADKSDVI 118

Query: 666 ERAHQPLQNLTPIGGDGAPPFDDSSAPDNLPKDGSEWVELLVREMTDASNVDDAKARASR 487
           + ++ P Q +   G + APP +D SA  +L  DG+EWVEL VREM  ASN+DDA+ARASR
Sbjct: 119 DESNVPAQGVATTGAE-APPTEDLSASAHLSLDGAEWVELFVREMMSASNIDDARARASR 177

Query: 486 VLEFLETSIRTRAGSEAAQNFQMENMMLKEQIEALLRENTILKRAVAIQHERQKEHDERS 307
            LE LE SI  RAG+EA +NF  E+M+LKEQ++AL++ENTILKRAV+IQHERQKE++ER+
Sbjct: 178 ALEVLEKSICARAGAEAVKNFHQEHMILKEQVQALIQENTILKRAVSIQHERQKEYEERN 237

Query: 306 QELQHLKQLVSQYQEQLRTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 160
           QE+Q LKQLVSQYQ+QLRTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 238 QEMQQLKQLVSQYQDQLRTLEVNNYALTLHLKQAQQSSSIPGRFHPDVF 286


>gb|ABK95835.1| unknown [Populus trichocarpa]
          Length = 285

 Score =  282 bits (721), Expect = 1e-73
 Identities = 167/289 (57%), Positives = 196/289 (67%), Gaps = 12/289 (4%)
 Frame = -3

Query: 990 MSAIVVCGNKRSYFEDLQTNXXXXXXXXXXXXXXXXXXXXXPT------ASSDHFNPFAS 829
           MSAIV CG KRS+FE+L                         +       +S +F+  +S
Sbjct: 1   MSAIV-CG-KRSFFEELTVTSPPVSKRIRCSSSSPVRFSPPRSNTIASNPASFNFSSSSS 58

Query: 828 PP---LHHLRTLFPAMDNQLLEKTLEECGNDLDTAIKRLTELRLGSS---SAEAISDTEA 667
                +  L  +FP MD QLLEK LEECG+DLD AI+ L ELRL S    SA A+     
Sbjct: 59  SSSAFVEQLAAIFPDMDKQLLEKALEECGDDLDLAIRSLNELRLASVENFSAAAVKSDVM 118

Query: 666 ERAHQPLQNLTPIGGDGAPPFDDSSAPDNLPKDGSEWVELLVREMTDASNVDDAKARASR 487
           ++A+ P Q L P   D   P +D SA   L  DG EWVEL VREM  ASN+DDA+ARASR
Sbjct: 119 DKANVPPQGLAPT--DAEAPTEDPSASALLSMDGMEWVELFVREMMSASNIDDARARASR 176

Query: 486 VLEFLETSIRTRAGSEAAQNFQMENMMLKEQIEALLRENTILKRAVAIQHERQKEHDERS 307
            LE LE SI TRAG+EAA++F  ENMMLKEQ++AL++ENTILKRAV+IQHERQKE +E S
Sbjct: 177 ALEALEKSICTRAGAEAAKSFHQENMMLKEQMQALIQENTILKRAVSIQHERQKEFEESS 236

Query: 306 QELQHLKQLVSQYQEQLRTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 160
           QELQ LKQLVSQYQ+QLRTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 237 QELQQLKQLVSQYQDQLRTLEVNNYALTLHLKQAQQSSSIPGRFHPDVF 285


Top