BLASTX nr result

ID: Cimicifuga21_contig00009851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009851
         (1922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   335   3e-89
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   323   1e-85
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   318   3e-84
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   317   7e-84
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   316   1e-83

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  335 bits (858), Expect = 3e-89
 Identities = 174/295 (58%), Positives = 195/295 (66%), Gaps = 1/295 (0%)
 Frame = +1

Query: 409  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDRITGRSKGYGFVTFRDPKAAT 588
            DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITD+ TGRSKGYGFVTFRDP++A 
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87

Query: 589  RACHDPSPIIDGRRANCNLASLGXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
            RAC DP+PIIDGRRANCNLASLG                                     
Sbjct: 88   RACLDPAPIIDGRRANCNLASLGRP----------------------------------- 112

Query: 769  XXXRPPPPYGHFRTITPYIASGQSPR-QYVASPTYHQPIPYNYQQXXXXXXXXXXXXXXX 945
               RP   YG  R +TPY+ S  + R  YV +  Y QP+ Y+YQQ               
Sbjct: 113  ---RPSMSYGRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPE 169

Query: 946  XVYPQQGVYNPYAAQQYLQVYGVPGTVNPAVYPVGQSRQPLPSNPGYTTLHGYAMPGHHI 1125
             VYPQ GVYNPY  QQYLQ+YGVPGTVN A+YP GQ  Q LPS+ GYTT+ GYAMPGH  
Sbjct: 170  YVYPQ-GVYNPYPGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQF 228

Query: 1126 VQFSGPNVNALTATHIPTIQASYPTVVAAPFPGQPQFVVPAHSPAFTQGSGSDHT 1290
            +QF G +VNA++ + IPTIQA YPT +AAP P QPQF+VPAHSP F QGSG D T
Sbjct: 229  MQFGGSSVNAISTSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQT 283


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  323 bits (827), Expect = 1e-85
 Identities = 173/297 (58%), Positives = 193/297 (64%), Gaps = 3/297 (1%)
 Frame = +1

Query: 409  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDRITGRSKGYGFVTFRDPKAAT 588
            DTTYTKVFVGGLAWETQSETMRRYFEQFG+ILEAVVITD+ TGRSKGYGFVTFR+P+AA 
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPEAAR 87

Query: 589  RACHDPSPIIDGRRANCNLASLGXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
            RAC DP+P+IDGRRANCNLASLG                                     
Sbjct: 88   RACADPTPMIDGRRANCNLASLGRP----------------------------------- 112

Query: 769  XXXRPPPPY-GHFRTITPYIASGQSPR-QYVASPTYHQPIPYNYQQXXXXXXXXXXXXXX 942
               RPP PY G  R   PYIAS Q+PR  Y  S  Y QP+ Y YQQ              
Sbjct: 113  ---RPPQPYVGRLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGP 169

Query: 943  XXVYPQQGVYNPYAA-QQYLQVYGVPGTVNPAVYPVGQSRQPLPSNPGYTTLHGYAMPGH 1119
              VY QQGVYNPYAA QQYLQ+YGVPGTVN  +YP GQ  Q +P   GYTT+ GYA+PGH
Sbjct: 170  EYVY-QQGVYNPYAAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGH 228

Query: 1120 HIVQFSGPNVNALTATHIPTIQASYPTVVAAPFPGQPQFVVPAHSPAFTQGSGSDHT 1290
            HI+QF GP VNA+T + +PTIQA YPT +AA  P Q QF+VPA SP +   SGSD T
Sbjct: 229  HIMQFGGPGVNAMTTSPLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSDQT 285


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  318 bits (815), Expect = 3e-84
 Identities = 171/296 (57%), Positives = 190/296 (64%), Gaps = 2/296 (0%)
 Frame = +1

Query: 409  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDRITGRSKGYGFVTFRDPKAAT 588
            DTTYTKVFVGGLAWETQSETMRRYFEQFG+ILEAVVITD+ TGRSKGYGFVTFR+P AA 
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPDAAR 87

Query: 589  RACHDPSPIIDGRRANCNLASLGXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
            RAC DP+PIIDGRRANCNLASLG                                     
Sbjct: 88   RACADPTPIIDGRRANCNLASLGRP----------------------------------- 112

Query: 769  XXXRPPPPYGHFRTITPYIASGQSPR-QYVASPTYHQPIPYNYQQXXXXXXXXXXXXXXX 945
               RPP PYG  R   PYI S Q+PR  YV S  Y QP+ Y YQQ               
Sbjct: 113  ---RPPLPYGRPRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPE 169

Query: 946  XVYPQQGVYNPYAA-QQYLQVYGVPGTVNPAVYPVGQSRQPLPSNPGYTTLHGYAMPGHH 1122
             VY QQG YNPYA   QYLQ+YGVPGTVN  +YP GQ  Q +P   GYT++ GYA+PGH 
Sbjct: 170  YVY-QQGAYNPYATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQ 228

Query: 1123 IVQFSGPNVNALTATHIPTIQASYPTVVAAPFPGQPQFVVPAHSPAFTQGSGSDHT 1290
            IVQF GP+VNA+T + +PTIQA Y T +AA  P Q QF+VPA SP + QGSGSD T
Sbjct: 229  IVQFGGPSVNAITTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQT 284


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  317 bits (812), Expect = 7e-84
 Identities = 166/297 (55%), Positives = 189/297 (63%), Gaps = 2/297 (0%)
 Frame = +1

Query: 409  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDRITGRSKGYGFVTFRDPKAAT 588
            DTTYTKVFVGGLAWETQSETMRRYF+QFGEILEAVVITD+ TGRSKGYGFVTFRDP+AA 
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAAR 87

Query: 589  RACHDPSPIIDGRRANCNLASLGXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
            RAC DPSP+IDGRRANCNLASLG                                     
Sbjct: 88   RACADPSPVIDGRRANCNLASLGRP----------------------------------- 112

Query: 769  XXXRPPPPYGHFRTITPYIASGQSPR-QYVASPTYHQPIPYNYQQXXXXXXXXXXXXXXX 945
               RPP PYG  R  +PY+ S Q  R  YV    Y QP+ Y+YQQ               
Sbjct: 113  ---RPPLPYGRIRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPE 169

Query: 946  XVYPQQGVYNPYAAQQYLQVYGVPGTVNPA-VYPVGQSRQPLPSNPGYTTLHGYAMPGHH 1122
             +YPQ  +YNPY  QQYLQ+YGVPG VN   +YP GQ  Q + S  GY+ + GY +PGH 
Sbjct: 170  YIYPQS-LYNPYMGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQ 228

Query: 1123 IVQFSGPNVNALTATHIPTIQASYPTVVAAPFPGQPQFVVPAHSPAFTQGSGSDHTA 1293
            IV + G NVNA+T + +P IQASYP+ +AAP PGQPQF+VPA SP F QGSG D TA
Sbjct: 229  IVPYGGSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTA 285


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
            max]
          Length = 293

 Score =  316 bits (810), Expect = 1e-83
 Identities = 168/304 (55%), Positives = 191/304 (62%), Gaps = 9/304 (2%)
 Frame = +1

Query: 409  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDRITGRSKGYGFVTFRDPKAAT 588
            DTTYTKVFVGGLAWETQSETMRRYF+QFGEILEAVVITD+ TGRSKGYGFVTFRDP+AA 
Sbjct: 28   DTTYTKVFVGGLAWETQSETMRRYFDQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAAR 87

Query: 589  RACHDPSPIIDGRRANCNLASLGXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 768
            RAC DP+P+IDGRRANCNLASLG                                     
Sbjct: 88   RACADPTPVIDGRRANCNLASLGRP----------------------------------- 112

Query: 769  XXXRPPPPYG-------HFRTITPYIASGQSPR-QYVASPTYHQ-PIPYNYQQXXXXXXX 921
               RPP PYG         R  +PY+ S Q  R  YV    Y Q P+ Y+YQQ       
Sbjct: 113  ---RPPLPYGIVLCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPY 169

Query: 922  XXXXXXXXXVYPQQGVYNPYAAQQYLQVYGVPGTVNPAVYPVGQSRQPLPSNPGYTTLHG 1101
                     +YPQ  +YNPY  QQYLQ+YGVPG VN  VYP GQ  Q +PS  GY+ + G
Sbjct: 170  GYTTYGPEYIYPQS-LYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQG 228

Query: 1102 YAMPGHHIVQFSGPNVNALTATHIPTIQASYPTVVAAPFPGQPQFVVPAHSPAFTQGSGS 1281
            Y +PGH IV + G NVNA+T + +P IQASYP+ +AAP PGQPQF+VPAHSP F QGSG 
Sbjct: 229  YTVPGHQIVPYGGSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGP 288

Query: 1282 DHTA 1293
            D TA
Sbjct: 289  DQTA 292


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