BLASTX nr result

ID: Cimicifuga21_contig00009831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009831
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]        127   2e-27
sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03...   127   2e-27
ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicu...   126   5e-27
ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycin...   124   3e-26
gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum]              120   3e-25

>gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
          Length = 202

 Score =  127 bits (320), Expect = 2e-27
 Identities = 59/79 (74%), Positives = 71/79 (89%)
 Frame = +2

Query: 167 HPPYFQMIKEALLALHEKGGSSPHAISKFVEENHKADLPGNFKKILSLQLRNSVVKGKLI 346
           HPPYFQMIKEALLAL+EKGGSSP+A++K++E+ HK +LP NF+KIL LQL+NS  KGKLI
Sbjct: 49  HPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLI 108

Query: 347 KVKASYKLSDASKKETTVK 403
           K+KASYKLS+A KKETT K
Sbjct: 109 KIKASYKLSEAGKKETTTK 127


>sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 gi|436823|gb|AAB03076.1| histone H1
           [Solanum pennellii]
          Length = 202

 Score =  127 bits (320), Expect = 2e-27
 Identities = 59/79 (74%), Positives = 71/79 (89%)
 Frame = +2

Query: 167 HPPYFQMIKEALLALHEKGGSSPHAISKFVEENHKADLPGNFKKILSLQLRNSVVKGKLI 346
           HPPYFQMIKEALLAL+EKGGSSP+A++K++E+ HK +LP NF+KIL LQL+NS  KGKLI
Sbjct: 49  HPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLI 108

Query: 347 KVKASYKLSDASKKETTVK 403
           K+KASYKLS+A KKETT K
Sbjct: 109 KIKASYKLSEAGKKETTTK 127


>ref|NP_001234389.1| H1 histone-like protein [Solanum lycopersicum]
           gi|825521|emb|CAA77867.1| H1 histone-like protein
           [Solanum lycopersicum]
          Length = 207

 Score =  126 bits (317), Expect = 5e-27
 Identities = 58/79 (73%), Positives = 71/79 (89%)
 Frame = +2

Query: 167 HPPYFQMIKEALLALHEKGGSSPHAISKFVEENHKADLPGNFKKILSLQLRNSVVKGKLI 346
           HPPYFQMIKEALL+L+EKGGSSP+A++K++E+ HK +LP NF+KIL LQL+NS  KGKLI
Sbjct: 54  HPPYFQMIKEALLSLNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLI 113

Query: 347 KVKASYKLSDASKKETTVK 403
           K+KASYKLS+A KKETT K
Sbjct: 114 KIKASYKLSEAGKKETTTK 132


>ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycine max]
           gi|255629522|gb|ACU15107.1| unknown [Glycine max]
          Length = 202

 Score =  124 bits (311), Expect = 3e-26
 Identities = 57/79 (72%), Positives = 70/79 (88%)
 Frame = +2

Query: 167 HPPYFQMIKEALLALHEKGGSSPHAISKFVEENHKADLPGNFKKILSLQLRNSVVKGKLI 346
           HPPYFQMIKEAL+AL+EKGGSSP+AI+K++EE HKA LP NFKKIL LQL+N   +GKL+
Sbjct: 47  HPPYFQMIKEALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLV 106

Query: 347 KVKASYKLSDASKKETTVK 403
           K+KASYKL++A+KKE T K
Sbjct: 107 KIKASYKLTEAAKKENTAK 125


>gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum]
          Length = 206

 Score =  120 bits (302), Expect = 3e-25
 Identities = 56/75 (74%), Positives = 67/75 (89%)
 Frame = +2

Query: 167 HPPYFQMIKEALLALHEKGGSSPHAISKFVEENHKADLPGNFKKILSLQLRNSVVKGKLI 346
           HPPYFQMIKEALLAL+EKGGSSP+AI+K+ E+ HK +LP NF+KIL LQL+NS  KGKL+
Sbjct: 54  HPPYFQMIKEALLALNEKGGSSPYAIAKYTEDKHKDELPANFRKILGLQLKNSAAKGKLM 113

Query: 347 KVKASYKLSDASKKE 391
           K+KASYKLS+A KKE
Sbjct: 114 KIKASYKLSEAGKKE 128


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