BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009828
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   175   4e-42
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           174   9e-42
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         171   6e-41
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            170   1e-40
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   168   4e-40

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  175 bits (443), Expect = 4e-42
 Identities = 78/100 (78%), Positives = 90/100 (90%)
 Frame = -1

Query: 301  RPDIAHAVGVTSRYLANPGKEHWEAVKWTLRYLRGTSKMCLCFGGKKPILEGFSDSDMAG 122
            RPDIAHAVGV SR+L NPGKEHWEAVKW LRYLRGT+  CLCFGG  PIL+G++D+DMAG
Sbjct: 1126 RPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAG 1185

Query: 121  DVDTSRSTSGYLFTFGGGAVSWQSRLQKCVALSTTEAEYI 2
            D+D  +S++GYLFTF GGA+SWQS+LQKCVALSTTEAEYI
Sbjct: 1186 DIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYI 1225


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  174 bits (440), Expect = 9e-42
 Identities = 78/100 (78%), Positives = 90/100 (90%)
 Frame = -1

Query: 301  RPDIAHAVGVTSRYLANPGKEHWEAVKWTLRYLRGTSKMCLCFGGKKPILEGFSDSDMAG 122
            RPDIAHAVGV SR+L+NPGKEHW+AVKW LRYLRGTSK+CLCFG   P+L G++D+DMAG
Sbjct: 1127 RPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAG 1186

Query: 121  DVDTSRSTSGYLFTFGGGAVSWQSRLQKCVALSTTEAEYI 2
            DVD+ +STSGYL  F GGAVSWQS+LQKCVALSTTEAE+I
Sbjct: 1187 DVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFI 1226


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/100 (78%), Positives = 89/100 (89%)
 Frame = -1

Query: 301  RPDIAHAVGVTSRYLANPGKEHWEAVKWTLRYLRGTSKMCLCFGGKKPILEGFSDSDMAG 122
            RPDIAHAVGV SR+L+NPG+EHW+AVKW LRYLRGTS + LCFG  KPIL G++DSDMAG
Sbjct: 1124 RPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYTDSDMAG 1183

Query: 121  DVDTSRSTSGYLFTFGGGAVSWQSRLQKCVALSTTEAEYI 2
            D+DT +STSGYL T+ GGAVSWQSRLQKCV LSTTEAE+I
Sbjct: 1184 DIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFI 1223


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/100 (78%), Positives = 87/100 (87%)
 Frame = -1

Query: 301 RPDIAHAVGVTSRYLANPGKEHWEAVKWTLRYLRGTSKMCLCFGGKKPILEGFSDSDMAG 122
           RPDIAHAVG+ SRYLANP K HWEAVKW LRYLRGTS + LCFGG +PILEGF+D+DMAG
Sbjct: 486 RPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCFGGGEPILEGFTDADMAG 545

Query: 121 DVDTSRSTSGYLFTFGGGAVSWQSRLQKCVALSTTEAEYI 2
           D+D  +STSGYLF F  GA+SWQS+LQKCVALSTTE EYI
Sbjct: 546 DLDNRKSTSGYLFKFARGAISWQSKLQKCVALSTTEVEYI 585


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/100 (79%), Positives = 88/100 (88%)
 Frame = -1

Query: 301  RPDIAHAVGVTSRYLANPGKEHWEAVKWTLRYLRGTSKMCLCFGGKKPILEGFSDSDMAG 122
            RPDIA+AVGV SR+L+NPG+ HWEAVKW +RYLRGTSK+ L FG  KPIL G++DSDMAG
Sbjct: 1097 RPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAG 1156

Query: 121  DVDTSRSTSGYLFTFGGGAVSWQSRLQKCVALSTTEAEYI 2
            DVD  +STSGYL TF GGAVSWQSRLQKCVALSTTEAEYI
Sbjct: 1157 DVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYI 1196