BLASTX nr result

ID: Cimicifuga21_contig00009664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009664
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD95031.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana]         92   3e-17
ref|XP_002889522.1| hypothetical protein ARALYDRAFT_470458 [Arab...    92   3e-17
ref|XP_002881265.1| hypothetical protein ARALYDRAFT_482251 [Arab...    92   3e-17
pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From A...    92   3e-17
pdb|2C7Y|A Chain A, Plant Enzyme gi|109157269|pdb|2C7Y|B Chain B...    92   3e-17

>dbj|BAD95031.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana]
          Length = 343

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 54  RQEQDEAAVESHRKXXXXXXXGKFRDEIVPVLTKIVDPKTGEEKAITVTVDDGIRPDTTL 233
           RQEQD+AAV+SHRK       GKF+DEI+PV TK+VDPKTG+EK ITV+VDDGIRP TTL
Sbjct: 92  RQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTL 151

Query: 234 CS 239
            S
Sbjct: 152 AS 153


>ref|XP_002889522.1| hypothetical protein ARALYDRAFT_470458 [Arabidopsis lyrata subsp.
           lyrata] gi|297335364|gb|EFH65781.1| hypothetical protein
           ARALYDRAFT_470458 [Arabidopsis lyrata subsp. lyrata]
          Length = 419

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +3

Query: 45  NPCRQEQDEAAVESHRKXXXXXXXGKFRDEIVPVLTKIVDPKTGEEKAITVTVDDGIRPD 224
           N  R+EQD+AAV+SHRK       GKF+DEI+PV TKIVDPKTG+EK+ITV+VDDGIRP+
Sbjct: 174 NVSREEQDQAAVDSHRKAAFATASGKFKDEILPVKTKIVDPKTGDEKSITVSVDDGIRPN 233

Query: 225 TTL 233
           TTL
Sbjct: 234 TTL 236


>ref|XP_002881265.1| hypothetical protein ARALYDRAFT_482251 [Arabidopsis lyrata subsp.
           lyrata] gi|297327104|gb|EFH57524.1| hypothetical protein
           ARALYDRAFT_482251 [Arabidopsis lyrata subsp. lyrata]
          Length = 462

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 54  RQEQDEAAVESHRKXXXXXXXGKFRDEIVPVLTKIVDPKTGEEKAITVTVDDGIRPDTTL 233
           RQEQD+AAV+SHRK       GKF+DEI+PV TK+VDPKTG+EK ITV+VDDGIRP TTL
Sbjct: 211 RQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTL 270

Query: 234 CS 239
            S
Sbjct: 271 AS 272


>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis
           Thaliana gi|295982058|pdb|2WU9|B Chain B, Crystal
           Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana
          Length = 442

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 54  RQEQDEAAVESHRKXXXXXXXGKFRDEIVPVLTKIVDPKTGEEKAITVTVDDGIRPDTTL 233
           RQEQD+AAV+SHRK       GKF+DEI+PV TK+VDPKTG+EK ITV+VDDGIRP TTL
Sbjct: 191 RQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTL 250

Query: 234 CS 239
            S
Sbjct: 251 AS 252


>pdb|2C7Y|A Chain A, Plant Enzyme gi|109157269|pdb|2C7Y|B Chain B, Plant Enzyme
           gi|109157270|pdb|2C7Z|A Chain A, Plant Enzyme Crystal
           Form Ii
          Length = 404

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +3

Query: 54  RQEQDEAAVESHRKXXXXXXXGKFRDEIVPVLTKIVDPKTGEEKAITVTVDDGIRPDTTL 233
           RQEQD+AAV+SHRK       GKF+DEI+PV TK+VDPKTG+EK ITV+VDDGIRP TTL
Sbjct: 174 RQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTL 233

Query: 234 CS 239
            S
Sbjct: 234 AS 235


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