BLASTX nr result

ID: Cimicifuga21_contig00009660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009660
         (1659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|22353...   474   e-131
ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783...   457   e-126
ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853...   432   e-118
ref|XP_003518356.1| PREDICTED: uncharacterized protein LOC100789...   421   e-115
ref|XP_002467050.1| hypothetical protein SORBIDRAFT_01g018820 [S...   401   e-109

>ref|XP_002525874.1| Nibrin, putative [Ricinus communis] gi|223534788|gb|EEF36478.1|
            Nibrin, putative [Ricinus communis]
          Length = 529

 Score =  474 bits (1221), Expect = e-131
 Identities = 261/513 (50%), Positives = 342/513 (66%), Gaps = 13/513 (2%)
 Frame = +1

Query: 1    FSKGTYKVGRKGCDVIINTDKGVSRIHAEVVIDSMTSLDPLQRRSSNFSSNVHIKDCSKY 180
            F KGTYKVGRKGCDVIIN DKGVSRIHAE+++D M SL+P++  S   +S V I+DCSKY
Sbjct: 20   FKKGTYKVGRKGCDVIINKDKGVSRIHAEIIVDEMISLNPMKSNSDR-TSRVRIRDCSKY 78

Query: 181  GTFINKKSGSKSKVSEYPNKEAPLKDGDLLSFGTGNATYRFSFVPLVFFAHSPKDNCMDH 360
            GTFINK   SK KV E+PNKE  LKDGD++SFGTGNATY FSFVPL+FF        ++ 
Sbjct: 79   GTFINKNLDSKEKVHEFPNKETTLKDGDMVSFGTGNATYSFSFVPLIFFVCCSGSFQVND 138

Query: 361  SLQEDITLIGARAIHSWSAECTHVLVDESMPVKEDLIDAIVAQKPIVLKSWLKVVAEKKI 540
             LQ+ ++ IGA      S ECTHV++D  MP+K+D+I+AIVA+KP+VL+SW+++VAEK I
Sbjct: 139  PLQDKVSSIGACITFQLSEECTHVIMDHQMPLKKDVIEAIVAKKPMVLQSWVELVAEKGI 198

Query: 541  CVEIPSYDNYIPTLTLEGLPVKIVDPKVRENCVAGYKFLLGSLELYKFGDRLRSLLGVGG 720
              EIPS+ +Y+PTLT+EG+PVK+VD   R NC+ GY FLL SL +YKFGDRL+++L VGG
Sbjct: 199  GSEIPSWSSYVPTLTVEGVPVKVVDSVTRANCLKGYTFLLESLNMYKFGDRLQAMLEVGG 258

Query: 721  AKVLSADGFGSSTEMSEDGANISVVLVNPPGSANHFSNFQQLRSLNRVNEISLVRAVVSG 900
            A ++  + F SS E  +   N  +V V P GSA+ F  F +L SL+RVNE+ L+ AVVSG
Sbjct: 259  ANIVFIEEFYSSNEGLDYKENFRMVCVIPQGSADKFGRFSKLSSLSRVNEVDLLYAVVSG 318

Query: 901  HLDQSIIESAPVFVSSSCSTDETIVEDSDVEMDTVTSLRVAQSSKLEATTKDDGEEQISR 1080
            HLD S +    V VSSSCSTDET+V DSD E++T+       S+   A    +  + +++
Sbjct: 319  HLDLSKLILPTVVVSSSCSTDETVVADSDEEVETM-------STHATANICSEAPKFVNK 371

Query: 1081 HHLSVEAEKVE---VPSPSFKAEDS----------GMMGKRVDVSKLETSLDQSSDIIYS 1221
               S    KVE   V +P  K ED           GM  KR  V + E++   +SDIIYS
Sbjct: 372  VETSPIQAKVETSPVDNPCTKLEDRHVVRSMGNNIGMTAKREKVDEPESA---NSDIIYS 428

Query: 1222 QDLIVRDTNTAAPVHSTTIGPINFKCFKKRETPSGNSFKNLVPYSKNPYRESDYGNXXXX 1401
            Q+LI+RD      + ST    I+FK FKK++T SGNSF NL+P+SK  Y++SD GN    
Sbjct: 429  QNLIIRDWQLPVRISSTNERFIDFKRFKKKQTQSGNSFNNLIPFSKYSYKDSDPGNQEML 488

Query: 1402 XXXXXXXXXXQLEAIADDLFNNDKAKRRRAADS 1500
                      Q+EAIA+DLFN++K +RR  A S
Sbjct: 489  HSMKEERKRKQMEAIAEDLFNSEKGRRRGGAGS 521


>ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783205 [Glycine max]
          Length = 555

 Score =  457 bits (1176), Expect = e-126
 Identities = 255/540 (47%), Positives = 347/540 (64%), Gaps = 33/540 (6%)
 Frame = +1

Query: 1    FSKGTYKVGRKGCDVIINTDKGVSRIHAEVVIDSMTSLDPLQRRSSNFSSNVHIKDCSKY 180
            F  G YKVGRKGCDVII  DKGVSR+HAE+V++++  ++PL  + S+ SS++HI+DCSKY
Sbjct: 20   FKTGLYKVGRKGCDVIITKDKGVSRVHAEIVVNTVNPVNPLPNKCSHLSSSIHIRDCSKY 79

Query: 181  GTFINKKSGSKSKVSEYPNKEAPLKDGDLLSFGTGNATYRFSFVPLVFFAHSPKDNCMDH 360
            GTFINK  G+K KV E PNKE  L++GDL+SFGTG ATY+F  VPLVFF  S   N +D 
Sbjct: 80   GTFINKNGGAKKKVHELPNKETALENGDLVSFGTGTATYKFCHVPLVFFICS--SNKVDQ 137

Query: 361  SLQEDITLIGARAIHSWSAECTHVLVDESMPVKEDLIDAIVAQKPIVLKSWLKVVAEKKI 540
            SL+E I+ IGA   H+    CTHVLVD+ MP+K+DL+DA+VA+K  VLK+WL+  AEK I
Sbjct: 138  SLEEKISSIGASITHTLGEGCTHVLVDQLMPLKKDLVDAVVAKKSCVLKNWLEFFAEKNI 197

Query: 541  CVEIPSYDNYIPTLTLEGLPVKIVDPKVRENCVAGYKFLLGSLELYKFGDRLRSLLGVGG 720
              EIPS  +YIPT++ EG  +KI DP++RE+C+ GY FLL S  LYKFGD+L+ LL V G
Sbjct: 198  STEIPSCHSYIPTVSAEGESIKIADPRMREDCLKGYTFLLESEHLYKFGDQLKPLLEVAG 257

Query: 721  AKVLSADGFGSSTEMSEDGANISVVLVNPPGSANHFSNFQQLRSLNRVNEISLVRAVVSG 900
            AKV+S++ F S+++ S+ G +  VV V P G A   + F +L SL RVNE+ ++ A  SG
Sbjct: 258  AKVVSSEDFSSNSQGSDYGEDNHVVCVIPGGPACKSNLFNKLSSLLRVNEMDVICAAFSG 317

Query: 901  HLDQSIIESAPVFVSSSCSTDETIVEDSDVEMDTVTSLRVAQSSKLEATTKDDGEEQI-- 1074
             LD SI++S  V VSSSCSTDETIV DSD+E++T TS+R   +   +   K +  +++  
Sbjct: 318  QLDLSILKSPCVLVSSSCSTDETIVADSDIEVETATSVRSNDAFSNDNNVKYEKTKELYV 377

Query: 1075 ------SRHHLSVEAEKVEV--------------------PSPSFKAEDSGMMGKRVDVS 1176
                   R H  +EA   +V                     S SF+ ++  +  K+  V+
Sbjct: 378  DSDPLDKRKHERIEASSDDVLHDTKRAKTETSLDGASVRSHSTSFRNDNDDIKVKKDKVN 437

Query: 1177 KLETSLDQSSDIIYSQDLIVRDTNTAAPVHSTTIGPI-NFKCFKKRETPSGNSFKNLVPY 1353
              E+    +SDI+YSQ LIVRDTN    + +     + NFK F+K +T SGNSF+NLVP+
Sbjct: 438  DDESG---NSDIVYSQYLIVRDTNIRTSISTAPNSSVPNFKRFRKAQTQSGNSFENLVPF 494

Query: 1354 SKNPYRESDYGNXXXXXXXXXXXXXXQLEAIADDLFNNDKAKR----RRAADSSIRGILS 1521
             K PY++SD GN              ++EA+ADD+FNN+  KR     R    S+RGIL+
Sbjct: 495  GKYPYKDSDCGNEDVTELVKEEKRRKKMEAMADDMFNNEARKRGTAGSRGTVGSLRGILT 554


>ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera]
            gi|296083807|emb|CBI24024.3| unnamed protein product
            [Vitis vinifera]
          Length = 595

 Score =  432 bits (1110), Expect = e-118
 Identities = 258/577 (44%), Positives = 335/577 (58%), Gaps = 68/577 (11%)
 Frame = +1

Query: 1    FSKGTYKVGRKGCDVIINTDKGVSRIHAEVVIDSMTSLDPLQRRSSNFSSNVHIKDCSKY 180
            F+KGTYKVGRKGCDVI+  DKGVSRIHAE+++DSM SLDP   +SSN SSNV I+DCSKY
Sbjct: 20   FAKGTYKVGRKGCDVIVKKDKGVSRIHAEIIVDSMISLDPQWNKSSNVSSNVRIRDCSKY 79

Query: 181  GTFINKKSGSKSKVSEYPNKEAPLKDGDLLSFGTGNATYRFSFVPLVFFAHSPKDNCMDH 360
            GTFINK  GSK K+ E+PNKE  LKDGDL+SFGTGNATYRF FVPL+FF +  +   M+H
Sbjct: 80   GTFINKDLGSKEKLHEFPNKETTLKDGDLVSFGTGNATYRFGFVPLIFFVYRSEPFQMNH 139

Query: 361  SLQEDITLIGARAIHSWSAECTHVLVDESMPVKEDLIDAIVAQKPIVLKSWLKVVAEKKI 540
            SLQ+ I+ IGA    +WS+ECTHVLVD+ M VKEDL+D  +A+KP+VL  W++ VAEK I
Sbjct: 140  SLQDKISSIGASVTRAWSSECTHVLVDQFMLVKEDLVDIFLAKKPLVLNDWIEFVAEKNI 199

Query: 541  CVEIPSYDNYIPTLTLEGLPVKIVDPKVRENCVAGYKFLLGSLELYKFGDRLRSLLGVGG 720
              EIPS ++Y+PTLT  G+ VK+ D   RENC+ G  FLL     Y FGDRL+SLL   G
Sbjct: 200  RNEIPSCNDYVPTLTCGGVSVKVGDSISRENCLKGCTFLLEPAHKYNFGDRLQSLLEASG 259

Query: 721  AKVLSADGFGSSTEMSEDGANISVVLVNPPGSANHFSNFQQLRSLNRVNEISLVRAVVSG 900
            AKV S DG  S ++  E G N  VV V P  SA+ F +F   RS++ V E++L+ AV+SG
Sbjct: 260  AKVDSIDGLSSRSQGLEGGENNRVVHVIPACSADKFDSFHNRRSVSSVKEMNLISAVISG 319

Query: 901  HLDQSIIESAPVFVSSSCSTDETIVEDSDVEMDTVTSLRVAQSSKLEATTKDDGEEQIS- 1077
            HLD S I S PV VSSSCSTDET+V DSD E++T TS     ++  +   K D + +IS 
Sbjct: 320  HLDPSTIISPPVLVSSSCSTDETVVADSDAEVETATSSHANSAAHTKEVFKYDSKGEISV 379

Query: 1078 ------------RHHLSVEAEKVEVPSPSFKAEDSGMMGKRVDVSKLETSLDQSSDIIYS 1221
                          H +  A   E      K E S +     +V +  TS+  ++ +  +
Sbjct: 380  VADSDAEVETATLIHANAAACTTETIKYDSKGEISVVADSDAEV-ETATSIHTNAAVRTA 438

Query: 1222 QDL---------IVRDTNTAAPVHSTTIGPINFKCFKKR----ETPSGN----------- 1329
            +D+         I +  N +   H T     N     +R    E+ SGN           
Sbjct: 439  EDIKYDSKGEISIGQAANASETGHMTHFRQRNDGVTTRRDKVDESESGNPDVLYSQDLIV 498

Query: 1330 ----------SFKNLV---------------------PYSKNPYRESDYGNXXXXXXXXX 1416
                      S KN +                     P++K PY+ESD G+         
Sbjct: 499  RDINLLTSFSSTKNRIVNFKCFRKAKTQSGNSFNNLIPFAKYPYKESDNGSDEVMQSVKE 558

Query: 1417 XXXXXQLEAIADDLFNNDKAKRRRAADSSIRGILSRG 1527
                 Q+EAIA+DLFNN+K +RR  A  S+ G+L+RG
Sbjct: 559  EKKRKQMEAIAEDLFNNEKGRRRGVA-GSLAGLLTRG 594


>ref|XP_003518356.1| PREDICTED: uncharacterized protein LOC100789459 [Glycine max]
          Length = 526

 Score =  421 bits (1083), Expect = e-115
 Identities = 239/528 (45%), Positives = 330/528 (62%), Gaps = 32/528 (6%)
 Frame = +1

Query: 34   GCDVIINTDKGVSRIHAEVVIDSMTSLDPLQRRSSNFSSNVHIKDCSKYGTFINKKSGSK 213
            GCDVII  DKGVSR+HAE+V+++M  ++PL    S+ S ++HI+DCSKYGTFI+K  G+K
Sbjct: 5    GCDVIITKDKGVSRVHAEIVVNTMNPVNPLPNERSHLSHSIHIRDCSKYGTFISKNDGAK 64

Query: 214  SKVSEYPNKEAPLKDGDLLSFGTGNATYRFSFVPLVFFAHSPKDNCMDHSLQEDITLIGA 393
             KV E PNK+  L+DGDL+SFGTG ATY+F  VPLVFF  S   N +D SL+E I+ IGA
Sbjct: 65   KKVHELPNKDTALEDGDLVSFGTGTATYKFCHVPLVFFICS--SNKVDRSLEEKISSIGA 122

Query: 394  RAIHSWSAECTHVLVDESMPVKEDLIDAIVAQKPIVLKSWLKVVAEKKICVEIPSYDNYI 573
               H+    CTHVLVD+ MP+K+DL+DA+V +K  VLK+WL+  A+K I  EIPS  +YI
Sbjct: 123  GITHTLGEGCTHVLVDQLMPLKKDLVDAVVTKKSCVLKNWLEFFAKKNISTEIPSCHSYI 182

Query: 574  PTLTLEGLPVKIVDPKVRENCVAGYKFLLGSLELYKFGDRLRSLLGVGGAKVLSADGFGS 753
            PT+++EG  +KI DP++RE+C+ GY FLL S  LYKFGD+L+ LL V GAKV+S++ F S
Sbjct: 183  PTVSVEGESIKIADPRMREDCLKGYTFLLESEHLYKFGDQLKPLLEVAGAKVVSSEDFCS 242

Query: 754  STEMSEDGANISVVLVNPPGSANHFSNFQQLRSLNRVNEISLVRAVVSGHLDQSIIESAP 933
             ++ ++ G +  VV V P G A   + F +L SL RV E+ ++ A  SG LD SI++S  
Sbjct: 243  DSQGTDYGEDNRVVCVIPGGPACKSNLFNKLSSLLRVTEMDVICAAFSGQLDLSILKSPC 302

Query: 934  VFVSSSCSTDETIVEDSDVEMDTVT------SLRVAQSSKLEATTK--DDGEEQISRHHL 1089
            + VSSSCSTDETIV DSD E++T T      +     + K   T +  DD +    R H 
Sbjct: 303  LLVSSSCSTDETIVADSDTEVETATPAPSNDAFSNGNNVKYGKTEELYDDSDPLDKRKHE 362

Query: 1090 SVEAEKVEVP-----------------------SPSFKAEDSGMMGKRVDVSKLETSLDQ 1200
             +EA   +V                        S SF+  + G+  K+  V   E+    
Sbjct: 363  RIEASSDDVSTRLHDIKHAKTETSLDGASARSHSTSFRNANDGIKIKKGMVDDYESG--- 419

Query: 1201 SSDIIYSQDLIVRDTNTAAPVHSTTIGPI-NFKCFKKRETPSGNSFKNLVPYSKNPYRES 1377
            +SD++YSQ L+VRDTN    + +     + NFK F+K +T SGNSF NLVP+ K PY++S
Sbjct: 420  NSDMVYSQYLVVRDTNICTIISTAPNSSVPNFKHFRKAQTQSGNSFDNLVPFGKYPYKDS 479

Query: 1378 DYGNXXXXXXXXXXXXXXQLEAIADDLFNNDKAKRRRAADSSIRGILS 1521
            D GN              ++EA+ADD+F+N+   R+R    S+RGIL+
Sbjct: 480  DCGNEDVTELVKKEKRQKKMEAMADDMFHNE--ARKRGTVGSLRGILT 525


>ref|XP_002467050.1| hypothetical protein SORBIDRAFT_01g018820 [Sorghum bicolor]
            gi|241920904|gb|EER94048.1| hypothetical protein
            SORBIDRAFT_01g018820 [Sorghum bicolor]
          Length = 562

 Score =  401 bits (1031), Expect = e-109
 Identities = 230/542 (42%), Positives = 323/542 (59%), Gaps = 35/542 (6%)
 Frame = +1

Query: 1    FSKGTYKVGRKGCDVIINTDKGVSRIHAEVVIDSMTSLDPLQRRSSNFSSNVHIKDCSKY 180
            F+ GTYKVGRK CDVI+ TD  +SR+HAE+ I+ M + DP     ++  S V + D SKY
Sbjct: 20   FAAGTYKVGRKDCDVIVQTDTSISRVHAEIAIEKMVAWDPHSGAPAS-PSFVRVIDRSKY 78

Query: 181  GTFINKKSGSKSKVSEYPNKEAPLKDGDLLSFGTGNATYRFSFVPLVFFAHSPKDNCMDH 360
            GTF+NK  G++     + ++   L DGD ++FGTGNAT+R SFVP+V + H  K + +D 
Sbjct: 79   GTFVNKVHGTQGS-RLHKDENMMLTDGDAVTFGTGNATFRLSFVPIVAYFHGGKSSRIDP 137

Query: 361  SLQEDITLIGARAIHSWSAECTHVLVDESMPVKEDLIDAIVAQKPIVLKSWLKVVAEKKI 540
            SL   +  IGA     WS ECTHVLVDES  +  +L+DA++A+K IVL  W K +AEK I
Sbjct: 138  SLHAVMKSIGAYVTRKWSNECTHVLVDESCSLTPELLDAVMAKKQIVLGDWFKAMAEKNI 197

Query: 541  CVEIPSYDNYIPTLTLEGLPVKIVDPKVRENCVAGYKFLLGSLELYKFGDRLRSLLGVGG 720
              EIPS   YIP LTL+G+ +K+VD  V +NC+AGY F+LGS + Y+FG++L  LL   G
Sbjct: 198  HTEIPSCTQYIPNLTLDGMVIKMVDISVIQNCLAGYTFILGSSDKYQFGEKLPGLLESTG 257

Query: 721  AKVLSADGFGSSTEMSEDGANISVVLVNPPGSANHFSNFQQLRSLNRVNEISLVRAVVSG 900
            AK L  D F ++++ S  G     +LV P      FS  + L +L++++++ L  A +SG
Sbjct: 258  AKYLHIDDFCANSQDSAAGDTDQQILVVPARYPLEFSKIRGLFTLSKISDVKLFAATLSG 317

Query: 901  HLDQSIIESAPVFVSSSCSTDETIVEDSDVEMDTVTSLRVAQSSK----LEATTKDDGEE 1068
             L+ + IE     V+SS STD+TIV DSDVEM+T TS  +  + K    +E  ++ D E+
Sbjct: 318  RLEATSIEPPAFIVTSSNSTDDTIVADSDVEMETATSDPIGAAKKSQHHIENISESDDEK 377

Query: 1069 QISRHHLSVEA---------------EKVEVPSP----------------SFKAEDSGMM 1155
             I+     V                 EKVE   P                + + ED+ ++
Sbjct: 378  DITNRTNEVAVSISGTKGNAIHPKYPEKVEDLKPIEEDVKVIEKTAMYRSTARDEDARIL 437

Query: 1156 GKRVDVSKLETSLDQSSDIIYSQDLIVRDTNTAAPVHSTTIGPINFKCFKKRETPSGNSF 1335
             K      L+TS D +SD+I+SQ+L+VR    +AP   T +G +NFK F+KRET SGNSF
Sbjct: 438  NKAPKDENLDTSRDGASDVIFSQNLVVRSFPQSAPAAPTEVGGVNFKRFRKRETVSGNSF 497

Query: 1336 KNLVPYSKNPYRESDYGNXXXXXXXXXXXXXXQLEAIADDLFNNDKAKRRRAADSSIRGI 1515
            K+L+P+++ PYRESDY                Q+EAIADDLFNN K+K+R AA SSI  +
Sbjct: 498  KDLIPFAREPYRESDYERGTLNDFMREEKQRKQMEAIADDLFNNAKSKKRAAAGSSIHTL 557

Query: 1516 LS 1521
            L+
Sbjct: 558  LT 559


Top