BLASTX nr result

ID: Cimicifuga21_contig00009521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009521
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-li...   479   e-133
emb|CBI34244.3| unnamed protein product [Vitis vinifera]              479   e-133
emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]   478   e-132
emb|CAK22424.1| matrix attachment region binding protein [Beta v...   467   e-129
dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]               463   e-128

>ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-like [Vitis vinifera]
          Length = 573

 Score =  479 bits (1232), Expect = e-133
 Identities = 247/289 (85%), Positives = 262/289 (90%), Gaps = 3/289 (1%)
 Frame = +2

Query: 23   EVDTMIIQAIGLLDDLDKELNTYVMRVRECYGWHFPELAKIVQDNILYAKAMKLMGDRIN 202
            +VDTMIIQAIGLLDDLDKELNTY MRVRE YGWHFPELAKIVQDNILYAKA+KLMG+R N
Sbjct: 155  KVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGNRTN 214

Query: 203  TADLDFSEVLLEEIETELKEAAVISMGIEVSDLDLINIKELCDQVLSISEYIAQLYDYLK 382
             A LDFSE+L EE+ETELKEAA+ISMG EVSDLDL+NIKELCDQVLS+SEY AQLYDYLK
Sbjct: 215  AAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKELCDQVLSLSEYRAQLYDYLK 274

Query: 383  SRMNIIAPNLTALVGELVGARLIAHGGSLLNIAKQPGRTIQILG---AFFRALKTKHATP 553
            SRMN IAPNLTALVGELVGARLIAHGGSLLN+AKQPG T+QILG   A FRALKTKHATP
Sbjct: 275  SRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATP 334

Query: 554  KYGLIYHASLIGQAAPKLKG*ISRSLVAKTALAIRYDALSDSQDNSMGIENRVKLEAQLR 733
            KYGLIYHASLIGQAAPKLKG ISRSL AKTALAIRYDAL D QDNSMG+ENR KLEA+LR
Sbjct: 335  KYGLIYHASLIGQAAPKLKGKISRSLAAKTALAIRYDALGDGQDNSMGLENRAKLEARLR 394

Query: 734  NLEGRELGRSVGSTKGKSKIEVYDKDRNKGVGAMLTTAKTYNPSADVVL 880
            NLEGRELG S GS KGK KIEVYDKDR KG GA++T AKTYNP+AD VL
Sbjct: 395  NLEGRELGHSAGSAKGKPKIEVYDKDRKKGSGALITAAKTYNPAADSVL 443


>emb|CBI34244.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  479 bits (1232), Expect = e-133
 Identities = 247/289 (85%), Positives = 262/289 (90%), Gaps = 3/289 (1%)
 Frame = +2

Query: 23   EVDTMIIQAIGLLDDLDKELNTYVMRVRECYGWHFPELAKIVQDNILYAKAMKLMGDRIN 202
            +VDTMIIQAIGLLDDLDKELNTY MRVRE YGWHFPELAKIVQDNILYAKA+KLMG+R N
Sbjct: 155  KVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGNRTN 214

Query: 203  TADLDFSEVLLEEIETELKEAAVISMGIEVSDLDLINIKELCDQVLSISEYIAQLYDYLK 382
             A LDFSE+L EE+ETELKEAA+ISMG EVSDLDL+NIKELCDQVLS+SEY AQLYDYLK
Sbjct: 215  AAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKELCDQVLSLSEYRAQLYDYLK 274

Query: 383  SRMNIIAPNLTALVGELVGARLIAHGGSLLNIAKQPGRTIQILG---AFFRALKTKHATP 553
            SRMN IAPNLTALVGELVGARLIAHGGSLLN+AKQPG T+QILG   A FRALKTKHATP
Sbjct: 275  SRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATP 334

Query: 554  KYGLIYHASLIGQAAPKLKG*ISRSLVAKTALAIRYDALSDSQDNSMGIENRVKLEAQLR 733
            KYGLIYHASLIGQAAPKLKG ISRSL AKTALAIRYDAL D QDNSMG+ENR KLEA+LR
Sbjct: 335  KYGLIYHASLIGQAAPKLKGKISRSLAAKTALAIRYDALGDGQDNSMGLENRAKLEARLR 394

Query: 734  NLEGRELGRSVGSTKGKSKIEVYDKDRNKGVGAMLTTAKTYNPSADVVL 880
            NLEGRELG S GS KGK KIEVYDKDR KG GA++T AKTYNP+AD VL
Sbjct: 395  NLEGRELGHSAGSAKGKPKIEVYDKDRKKGSGALITAAKTYNPAADSVL 443


>emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]
          Length = 472

 Score =  478 bits (1229), Expect = e-132
 Identities = 246/289 (85%), Positives = 262/289 (90%), Gaps = 3/289 (1%)
 Frame = +2

Query: 23   EVDTMIIQAIGLLDDLDKELNTYVMRVRECYGWHFPELAKIVQDNILYAKAMKLMGDRIN 202
            +VDTMIIQAIGLLDDLDKELNTY MRVRE YGWHFPELAKIVQDNILY+KA+KLMG+R N
Sbjct: 155  KVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYSKAVKLMGNRTN 214

Query: 203  TADLDFSEVLLEEIETELKEAAVISMGIEVSDLDLINIKELCDQVLSISEYIAQLYDYLK 382
             A LDFSE+L EE+ETELKEAA+ISMG EVSDLDL+NIKELCDQVLS+SEY AQLYDYLK
Sbjct: 215  AAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKELCDQVLSLSEYRAQLYDYLK 274

Query: 383  SRMNIIAPNLTALVGELVGARLIAHGGSLLNIAKQPGRTIQILG---AFFRALKTKHATP 553
            SRMN IAPNLTALVGELVGARLIAHGGSLLN+AKQPG T+QILG   A FRALKTKHATP
Sbjct: 275  SRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATP 334

Query: 554  KYGLIYHASLIGQAAPKLKG*ISRSLVAKTALAIRYDALSDSQDNSMGIENRVKLEAQLR 733
            KYGLIYHASLIGQAAPKLKG ISRSL AKTALAIRYDAL D QDNSMG+ENR KLEA+LR
Sbjct: 335  KYGLIYHASLIGQAAPKLKGKISRSLAAKTALAIRYDALGDGQDNSMGLENRAKLEARLR 394

Query: 734  NLEGRELGRSVGSTKGKSKIEVYDKDRNKGVGAMLTTAKTYNPSADVVL 880
            NLEGRELG S GS KGK KIEVYDKDR KG GA++T AKTYNP+AD VL
Sbjct: 395  NLEGRELGHSAGSAKGKPKIEVYDKDRKKGSGALITAAKTYNPAADSVL 443


>emb|CAK22424.1| matrix attachment region binding protein [Beta vulgaris]
          Length = 572

 Score =  467 bits (1202), Expect = e-129
 Identities = 238/289 (82%), Positives = 261/289 (90%), Gaps = 3/289 (1%)
 Frame = +2

Query: 23   EVDTMIIQAIGLLDDLDKELNTYVMRVRECYGWHFPELAKIVQDNILYAKAMKLMGDRIN 202
            +VDTMIIQAIGLLDDLDKELNTY MRVRE YGWHFPEL+KIVQDNILYAKA+KLMG+R+N
Sbjct: 155  KVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELSKIVQDNILYAKAVKLMGNRVN 214

Query: 203  TADLDFSEVLLEEIETELKEAAVISMGIEVSDLDLINIKELCDQVLSISEYIAQLYDYLK 382
             A LDFSEVL EE+ET LKEAA+ISMG EVSDLDL+NIKELCDQVLS++EY AQLYDYLK
Sbjct: 215  AAKLDFSEVLPEEVETGLKEAAMISMGTEVSDLDLLNIKELCDQVLSLAEYRAQLYDYLK 274

Query: 383  SRMNIIAPNLTALVGELVGARLIAHGGSLLNIAKQPGRTIQILG---AFFRALKTKHATP 553
            SRMN IAPNLTALVGELVGARLIAHGGSL+N+AKQPG T+QILG   A FRALKTKHATP
Sbjct: 275  SRMNTIAPNLTALVGELVGARLIAHGGSLINLAKQPGSTVQILGAEKALFRALKTKHATP 334

Query: 554  KYGLIYHASLIGQAAPKLKG*ISRSLVAKTALAIRYDALSDSQDNSMGIENRVKLEAQLR 733
            KYGLIYHASLIGQAAPK KG ISRSL AKTALAIRYDAL D+ DN+MG+ENR KLEA+LR
Sbjct: 335  KYGLIYHASLIGQAAPKHKGKISRSLAAKTALAIRYDALGDNPDNTMGLENRAKLEARLR 394

Query: 734  NLEGRELGRSVGSTKGKSKIEVYDKDRNKGVGAMLTTAKTYNPSADVVL 880
            NLEG+ELGRS GS KGK +IEVYDKD  KG GA++T AKTYNP+AD +L
Sbjct: 395  NLEGKELGRSAGSAKGKPQIEVYDKDHKKGAGALITAAKTYNPAADSIL 443


>dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]
          Length = 555

 Score =  463 bits (1191), Expect = e-128
 Identities = 237/289 (82%), Positives = 258/289 (89%), Gaps = 3/289 (1%)
 Frame = +2

Query: 23   EVDTMIIQAIGLLDDLDKELNTYVMRVRECYGWHFPELAKIVQDNILYAKAMKLMGDRIN 202
            +VDTMI+QAI LLDDLDKELNTY MRVRE YGWHFPELAKIVQDNILYAKA+KLMGDR+N
Sbjct: 155  KVDTMIVQAISLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGDRVN 214

Query: 203  TADLDFSEVLLEEIETELKEAAVISMGIEVSDLDLINIKELCDQVLSISEYIAQLYDYLK 382
             A LDFSE+L EE+E ELKEA++ISMG EVSDLDL NIK+LC QVLS SEY AQLYDYLK
Sbjct: 215  AAKLDFSEILPEEVEAELKEASMISMGTEVSDLDLENIKDLCSQVLSFSEYRAQLYDYLK 274

Query: 383  SRMNIIAPNLTALVGELVGARLIAHGGSLLNIAKQPGRTIQILG---AFFRALKTKHATP 553
            SRMN IAPNLTALVGELVGARLIAHGGSLLN+AKQPG T+QILG   A FRALKTKHATP
Sbjct: 275  SRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATP 334

Query: 554  KYGLIYHASLIGQAAPKLKG*ISRSLVAKTALAIRYDALSDSQDNSMGIENRVKLEAQLR 733
            KYGLIYHASLIGQAAPK KG ISRSL AKTALAIRYDAL+DSQDN+MG+ENR KLEA+LR
Sbjct: 335  KYGLIYHASLIGQAAPKHKGKISRSLAAKTALAIRYDALADSQDNTMGLENRAKLEARLR 394

Query: 734  NLEGRELGRSVGSTKGKSKIEVYDKDRNKGVGAMLTTAKTYNPSADVVL 880
             LEG+ELG+S GS KGK KIEVYDKDR KG GA++T AK YNP+AD V+
Sbjct: 395  ALEGKELGKSAGSAKGKPKIEVYDKDRKKGAGALITPAKVYNPAADSVI 443


Top