BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009499
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN400...   126   6e-27
gb|ABK22217.1| unknown [Picea sitchensis]                             109   8e-22
gb|ADE76898.1| unknown [Picea sitchensis]                              99   2e-18
ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase compl...    94   6e-17
gb|AEW08542.1| Pinus taeda anonymous locus CL373Contig1_03 genom...    91   3e-16

>gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN40051.1| unknown
           [Picea sitchensis] gi|224285742|gb|ACN40586.1| unknown
           [Picea sitchensis]
          Length = 231

 Score =  126 bits (317), Expect = 6e-27
 Identities = 76/153 (49%), Positives = 93/153 (60%), Gaps = 34/153 (22%)
 Frame = +2

Query: 251 SPREIRLFPIVEEDLELRLGFGATTG------VPN-HNGRGESL---------------- 361
           S R IR+  I EEDLELRLG G T+       +P+  NGR E +                
Sbjct: 79  SRRTIRVPVIKEEDLELRLGPGGTSAHVGVVHIPSLRNGRPERVRIQPVTIVPPIVPINI 138

Query: 362 ------QTRKYVKT-----PTPSCRQQAVEVEAVKLTCTICMDTMKEETSTICGHVFCKS 508
                 + +K+VK      P+ S     VEV+ VKLTC ICMD+MKEETSTICGH+FC+S
Sbjct: 139 SDDGEEEVQKHVKKRKHGHPSNS-NNLPVEVKEVKLTCAICMDSMKEETSTICGHIFCRS 197

Query: 509 CITDAIRIQKKCPTCRRELSVGNIHRIYLPGAT 607
           CI  AI+ QKKCPTCRR+LS+ NIHRI+LPG T
Sbjct: 198 CIMSAIQFQKKCPTCRRKLSMANIHRIFLPGRT 230


>gb|ABK22217.1| unknown [Picea sitchensis]
          Length = 203

 Score =  109 bits (273), Expect = 8e-22
 Identities = 62/140 (44%), Positives = 83/140 (59%), Gaps = 21/140 (15%)
 Frame = +2

Query: 251 SPREIRLFPIVEEDLELRLGFGATTGVP-NHNGR------------------GESLQT-- 367
           S R  R+  + EEDLELRLG   T     +HN R                  GE+ Q+  
Sbjct: 63  SQRSSRIPTVNEEDLELRLGLTVTGRTSADHNPRRRHSRVPPNKTIVLCDDAGEADQSCS 122

Query: 368 RKYVKTPTPSCRQQAVEVEAVKLTCTICMDTMKEETSTICGHVFCKSCITDAIRIQKKCP 547
           +K       S   Q+ E + VKLTC ICM TM+EETST+CGH+FCK CIT+AI + K+CP
Sbjct: 123 KKRKTGQQLSSDVQSDESKEVKLTCAICMSTMEEETSTVCGHIFCKKCITNAIHLWKRCP 182

Query: 548 TCRRELSVGNIHRIYLPGAT 607
           TCR++L++ +IHRIY+  +T
Sbjct: 183 TCRKKLTISSIHRIYISSST 202


>gb|ADE76898.1| unknown [Picea sitchensis]
          Length = 205

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 26/133 (19%)
 Frame = +2

Query: 287 EDLELRLGFGATTGVPNHNGRGESLQTR-KYVKTPTPSCRQQ------------------ 409
           EDLEL++G  A T +P   GR  SL+ R +  +  T SCR                    
Sbjct: 76  EDLELQVG-PAGTRMPL--GRVRSLKNRNRSCERKTSSCRDLVDLTTSNDECQLNSSMVS 132

Query: 410 -------AVEVEAVKLTCTICMDTMKEETSTICGHVFCKSCITDAIRIQKKCPTCRRELS 568
                  +  V+ +KL+C ICMD MKEET+TICGHVFCK CI  AI + K+CP+CR++L+
Sbjct: 133 KKRKPALSTGVKEIKLSCAICMDKMKEETTTICGHVFCKKCIVRAIEVYKQCPSCRKKLT 192

Query: 569 VGNIHRIYLPGAT 607
           + +IHRIY+ G+T
Sbjct: 193 MKSIHRIYISGST 205


>ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase complex slx8-rfp subunit
           slx8-like [Brachypodium distachyon]
          Length = 197

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
 Frame = +2

Query: 263 IRLFPIVEEDLEL--------RLGFGATTGVPNHNGRGESLQTRKYVKTPTPSCRQQAVE 418
           IR  P+   DLE+        R        +    G G SLQ++  VKT     +   V 
Sbjct: 75  IRRQPVTVVDLEVDASQEGNKRRRVAPVINISPETGEGSSLQSKNAVKTTKEPAK---VA 131

Query: 419 VEAVKLTCTICMDTMKEETSTICGHVFCKSCITDAIRIQKKCPTCRRELSVGNIHRIYLP 598
            +    TC +C + ++E ++TICGH+FC SCI  +I++QKKCPTCR+ L + N HRIYLP
Sbjct: 132 PKEPIFTCPVCWNKLEEPSTTICGHIFCTSCIKQSIQVQKKCPTCRKSLRMNNFHRIYLP 191

Query: 599 GATS 610
            + +
Sbjct: 192 NSVA 195


>gb|AEW08542.1| Pinus taeda anonymous locus CL373Contig1_03 genomic sequence
           gi|383155762|gb|AFG60084.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155764|gb|AFG60085.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155766|gb|AFG60086.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155768|gb|AFG60087.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155770|gb|AFG60088.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155772|gb|AFG60089.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155774|gb|AFG60090.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155776|gb|AFG60091.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155778|gb|AFG60092.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155780|gb|AFG60093.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155782|gb|AFG60094.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155784|gb|AFG60095.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155786|gb|AFG60096.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155788|gb|AFG60097.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155790|gb|AFG60098.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155792|gb|AFG60099.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155794|gb|AFG60100.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
           gi|383155796|gb|AFG60101.1| Pinus taeda anonymous locus
           CL373Contig1_03 genomic sequence
          Length = 72

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 38/59 (64%), Positives = 49/59 (83%)
 Frame = +2

Query: 407 QAVEVEAVKLTCTICMDTMKEETSTICGHVFCKSCITDAIRIQKKCPTCRRELSVGNIH 583
           Q+ E + VKLTC IC+ TM+EETSTICGH+FCK CIT+AI   K+CPTCR++L++ NIH
Sbjct: 14  QSDESKEVKLTCAICISTMEEETSTICGHIFCKKCITNAIHRWKRCPTCRKKLAINNIH 72