BLASTX nr result

ID: Cimicifuga21_contig00009497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009497
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
gb|AFK37103.1| unknown [Lotus japonicus]                              184   8e-45
gb|ABK93883.1| unknown [Populus trichocarpa]                          184   1e-44
ref|NP_001235838.1| uncharacterized protein LOC100526909 [Glycin...   181   7e-44
ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kD...   180   2e-43

>ref|XP_002330660.1| predicted protein [Populus trichocarpa] gi|222872264|gb|EEF09395.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  186 bits (473), Expect = 2e-45
 Identities = 93/121 (76%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
 Frame = -1

Query: 489 MVLLQPDPFLNELTSMYERSTEKGSVWVTFKRSSMKTKAAFNKMTTKGEAIEHRCLIRAT 310
           MVLLQ DPFLNELT++Y+ ST+KGS+WVT KRSSMK+K   NKMTT GE IE+RCLIRAT
Sbjct: 1   MVLLQLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRAT 60

Query: 309 DGKKTISTSVSAKDHQRFQASYATVLKAHMHALKKRERRDKKKVAEGAKKQEGV-KKPKK 133
           DGKKTISTSV A+DHQRFQASYAT+LKAHM ALKKRER+DKKK AEG KK+  V KKPK+
Sbjct: 61  DGKKTISTSVGARDHQRFQASYATILKAHMTALKKRERKDKKKAAEGDKKEGDVKKKPKR 120

Query: 132 I 130
           +
Sbjct: 121 V 121


>gb|AFK37103.1| unknown [Lotus japonicus]
          Length = 123

 Score =  184 bits (468), Expect = 8e-45
 Identities = 92/119 (77%), Positives = 103/119 (86%)
 Frame = -1

Query: 489 MVLLQPDPFLNELTSMYERSTEKGSVWVTFKRSSMKTKAAFNKMTTKGEAIEHRCLIRAT 310
           MVLLQ DPFLNELTS++ERSTEKGSVWVT KRSS+K+K   NK+ T GEAIE+RCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSLFERSTEKGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRAT 60

Query: 309 DGKKTISTSVSAKDHQRFQASYATVLKAHMHALKKRERRDKKKVAEGAKKQEGVKKPKK 133
           DGKKTISTSV  KDHQRFQASYAT+LKAHM ALKKRER+DKKK AE  K++   K+PKK
Sbjct: 61  DGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKSAEADKREGSSKRPKK 119


>gb|ABK93883.1| unknown [Populus trichocarpa]
          Length = 121

 Score =  184 bits (467), Expect = 1e-44
 Identities = 92/121 (76%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
 Frame = -1

Query: 489 MVLLQPDPFLNELTSMYERSTEKGSVWVTFKRSSMKTKAAFNKMTTKGEAIEHRCLIRAT 310
           MVLLQ DPFLNELT++Y+ ST+KGS+WVT KRSSMK+K   NKMTT GE IE+RCLIRAT
Sbjct: 1   MVLLQLDPFLNELTTLYQNSTDKGSIWVTLKRSSMKSKVQRNKMTTNGEPIEYRCLIRAT 60

Query: 309 DGKKTISTSVSAKDHQRFQASYATVLKAHMHALKKRERRDKKKVAEGAKKQEGV-KKPKK 133
           DGKKTISTSV A+DHQRFQASYAT+LKAHM ALKKRER+DKKK AE  KK+  V KKPK+
Sbjct: 61  DGKKTISTSVGARDHQRFQASYATILKAHMTALKKRERKDKKKAAESDKKEGDVKKKPKR 120

Query: 132 I 130
           +
Sbjct: 121 V 121


>ref|NP_001235838.1| uncharacterized protein LOC100526909 [Glycine max]
           gi|255631129|gb|ACU15930.1| unknown [Glycine max]
          Length = 120

 Score =  181 bits (460), Expect = 7e-44
 Identities = 91/119 (76%), Positives = 102/119 (85%)
 Frame = -1

Query: 489 MVLLQPDPFLNELTSMYERSTEKGSVWVTFKRSSMKTKAAFNKMTTKGEAIEHRCLIRAT 310
           MVLLQ DPFLNELTSM+ERST+ GSVWVT KRSS+K+K   NK+ T GEAIE+RCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTKLGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRAT 60

Query: 309 DGKKTISTSVSAKDHQRFQASYATVLKAHMHALKKRERRDKKKVAEGAKKQEGVKKPKK 133
           DGKKTISTSV  KDHQRFQASYAT+LKAHM ALKKRER+DKKK AE  K++   K+PKK
Sbjct: 61  DGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKPAEADKREGSSKRPKK 119


>ref|XP_004145229.1| PREDICTED: signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449474535|ref|XP_004154207.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus] gi|449506299|ref|XP_004162708.1| PREDICTED:
           signal recognition particle 14 kDa protein-like [Cucumis
           sativus]
          Length = 118

 Score =  180 bits (456), Expect = 2e-43
 Identities = 92/120 (76%), Positives = 103/120 (85%)
 Frame = -1

Query: 489 MVLLQPDPFLNELTSMYERSTEKGSVWVTFKRSSMKTKAAFNKMTTKGEAIEHRCLIRAT 310
           MVLLQ DPFLNELTSM+ERSTEKGSVWVT KRSS+K+K   NKMTT G+ IE+RCLIRAT
Sbjct: 1   MVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRAT 60

Query: 309 DGKKTISTSVSAKDHQRFQASYATVLKAHMHALKKRERRDKKKVAEGAKKQEGVKKPKKI 130
           DGKKTISTSV AKDH RFQASY+T+LKAHM ALKKRER+DKKK AE  K  +  KKP+K+
Sbjct: 61  DGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLK--KKPRKV 118


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