BLASTX nr result

ID: Cimicifuga21_contig00009495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009495
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634220.1| PREDICTED: nuclear transcription factor Y su...   268   1e-69
ref|XP_002284041.1| PREDICTED: nuclear transcription factor Y su...   263   3e-68
ref|NP_001234244.1| CONSTANS interacting protein 2a [Solanum lyc...   253   4e-65
ref|XP_004161372.1| PREDICTED: acetolactate synthase 3, chloropl...   249   4e-64
ref|XP_004138046.1| PREDICTED: nuclear transcription factor Y su...   248   1e-63

>ref|XP_003634220.1| PREDICTED: nuclear transcription factor Y subunit C-1-like isoform
           2 [Vitis vinifera] gi|147819278|emb|CAN73357.1|
           hypothetical protein VITISV_012625 [Vitis vinifera]
          Length = 213

 Score =  268 bits (684), Expect = 1e-69
 Identities = 139/196 (70%), Positives = 151/196 (77%), Gaps = 16/196 (8%)
 Frame = +3

Query: 93  FNHLIXXXXXXXXMFWSFQRQEIEQVNDFRNHQLPLARIKKIMKADEDVRMISAEAPILF 272
           F+HL+        MFWS+QRQEIEQVNDF+NHQLPLARIKKIMKADEDVRMISAEAPILF
Sbjct: 18  FHHLLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF 77

Query: 273 AKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTEIFDFLVDIVPRDESKDETGM 452
           AKACELFILELTIRSW+HAEENKRRTLQKNDIAAAITRT+IFDFLVDIVPRDE KDE G+
Sbjct: 78  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEGGL 137

Query: 453 --------GIPYY-------GPGVTVGRPALSGMDPGMYVHPPSQAWQSVWQ-XXXXXXX 584
                   G+PYY        PGV +GRPA+ G+DPG+YV PPSQAWQSVWQ        
Sbjct: 138 GMVGSTASGVPYYYPPMGQPAPGVMMGRPAVPGVDPGVYVQPPSQAWQSVWQTAEDGSYG 197

Query: 585 XXXXXXHVNLDGQGYV 632
                   NLDGQGYV
Sbjct: 198 SGGSSGQGNLDGQGYV 213


>ref|XP_002284041.1| PREDICTED: nuclear transcription factor Y subunit C-1-like isoform
           1 [Vitis vinifera] gi|359491105|ref|XP_003634221.1|
           PREDICTED: nuclear transcription factor Y subunit
           C-1-like isoform 3 [Vitis vinifera]
          Length = 211

 Score =  263 bits (673), Expect = 3e-68
 Identities = 137/194 (70%), Positives = 149/194 (76%), Gaps = 16/194 (8%)
 Frame = +3

Query: 93  FNHLIXXXXXXXXMFWSFQRQEIEQVNDFRNHQLPLARIKKIMKADEDVRMISAEAPILF 272
           F+HL+        MFWS+QRQEIEQVNDF+NHQLPLARIKKIMKADEDVRMISAEAPILF
Sbjct: 18  FHHLLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF 77

Query: 273 AKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTEIFDFLVDIVPRDESKDETGM 452
           AKACELFILELTIRSW+HAEENKRRTLQKNDIAAAITRT+IFDFLVDIVPRDE KDE G+
Sbjct: 78  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEGGL 137

Query: 453 --------GIPYY-------GPGVTVGRPALSGMDPGMYVHPPSQAWQSVWQ-XXXXXXX 584
                   G+PYY        PGV +GRPA+ G+DPG+YV PPSQAWQSVWQ        
Sbjct: 138 GMVGSTASGVPYYYPPMGQPAPGVMMGRPAVPGVDPGVYVQPPSQAWQSVWQTAEDGSYG 197

Query: 585 XXXXXXHVNLDGQG 626
                   NLDGQG
Sbjct: 198 SGGSSGQGNLDGQG 211


>ref|NP_001234244.1| CONSTANS interacting protein 2a [Solanum lycopersicum]
           gi|45544867|gb|AAS67369.1| CONSTANS interacting protein
           2a [Solanum lycopersicum]
          Length = 232

 Score =  253 bits (646), Expect = 4e-65
 Identities = 129/177 (72%), Positives = 142/177 (80%), Gaps = 20/177 (11%)
 Frame = +3

Query: 93  FNHLIXXXXXXXXMFWSFQRQEIEQVNDFRNHQLPLARIKKIMKADEDVRMISAEAPILF 272
           ++HL+        MFW++QRQEIEQVNDF+NHQLPLARIKKIMKADEDVRMISAEAP+LF
Sbjct: 34  YHHLLQQQQQQLQMFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPVLF 93

Query: 273 AKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTEIFDFLVDIVPRDESKDE--- 443
           AKACELFILELTIRSW+HAEENKRRTLQKNDIAAAITRT+IFDFLVDIVPRDE KDE   
Sbjct: 94  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEGVG 153

Query: 444 --------TGMGIPYYGP--------GVTVGRPALSGMDPGMYVH-PPSQAWQSVWQ 563
                   T  G+PYY P        GV +GRPA+ G+DP MYVH PPSQAWQSVWQ
Sbjct: 154 LGPGIVGSTASGVPYYYPPMGQPAPGGVMLGRPAVPGVDPSMYVHPPPSQAWQSVWQ 210


>ref|XP_004161372.1| PREDICTED: acetolactate synthase 3, chloroplastic-like [Cucumis
           sativus]
          Length = 755

 Score =  249 bits (637), Expect = 4e-64
 Identities = 136/204 (66%), Positives = 146/204 (71%), Gaps = 22/204 (10%)
 Frame = +3

Query: 93  FNHLIXXXXXXXXMFWSFQRQEIEQVNDFRNHQLPLARIKKIMKADEDVRMISAEAPILF 272
           F+HL+        MFWSFQRQEIEQVNDF+NHQLPLARIKKIMKADEDVRMISAEAPILF
Sbjct: 24  FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF 83

Query: 273 AKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTEIFDFLVDIVPRDESKDETGM 452
           AKACELFILELTIRSW+HAEENKRRTLQKNDIAAAITRT+IFDFLVDIVPRDE KDE G+
Sbjct: 84  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL 143

Query: 453 ---------GIPYYGP----------GVTVGRPALSGMDP-GMYVHPPSQAWQSVWQ--X 566
                    G+PYY P          G+ +GRPA   MDP G+Y  PPSQAWQSVWQ   
Sbjct: 144 GGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA---MDPTGVYAQPPSQAWQSVWQTAA 200

Query: 567 XXXXXXXXXXXXHVNLDGQGYVDH 638
                         NLDGQ    H
Sbjct: 201 EDGSYASGASSGQGNLDGQSLTKH 224


>ref|XP_004138046.1| PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis
           sativus]
          Length = 220

 Score =  248 bits (633), Expect = 1e-63
 Identities = 130/177 (73%), Positives = 140/177 (79%), Gaps = 20/177 (11%)
 Frame = +3

Query: 93  FNHLIXXXXXXXXMFWSFQRQEIEQVNDFRNHQLPLARIKKIMKADEDVRMISAEAPILF 272
           F+HL+        MFWSFQRQEIEQVNDF+NHQLPLARIKKIMKADEDVRMISAEAPILF
Sbjct: 24  FHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILF 83

Query: 273 AKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTEIFDFLVDIVPRDESKDETGM 452
           AKACELFILELTIRSW+HAEENKRRTLQKNDIAAAITRT+IFDFLVDIVPRDE KDE G+
Sbjct: 84  AKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL 143

Query: 453 ---------GIPYYGP----------GVTVGRPALSGMDP-GMYVHPPSQAWQSVWQ 563
                    G+PYY P          G+ +GRPA   MDP G+Y  PPSQAWQSVWQ
Sbjct: 144 GGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPA---MDPTGVYAQPPSQAWQSVWQ 197


Top