BLASTX nr result

ID: Cimicifuga21_contig00009489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009489
         (1683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525805.1| pentatricopeptide repeat-containing protein,...    68   8e-09
ref|XP_002328520.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-08
ref|XP_002334555.1| predicted protein [Populus trichocarpa] gi|2...    65   5e-08
ref|XP_002305931.1| predicted protein [Populus trichocarpa] gi|2...    65   5e-08
ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|2...    65   5e-08

>ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534892|gb|EEF36579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 182

 Score = 67.8 bits (164), Expect = 8e-09
 Identities = 33/78 (42%), Positives = 49/78 (62%)
 Frame = +3

Query: 3   AKEIFGSLFTKDLQPNTRTYKTGIN*F*KEGMRNDAQNLFSEMEEKGFVRDGYACNIVVQ 182
           AKE+F +L  + LQP+ RTY   I  F  EG   +A  +F EMEE G + DG + N+++Q
Sbjct: 79  AKELFSTLPIEGLQPDVRTYNILIKVFCNEGSLEEAYQVFREMEEGGSLPDGCSYNVIIQ 138

Query: 183 GFFKENDIHKSVQLLNAM 236
           GF + ND+  + QL++ M
Sbjct: 139 GFLRHNDLSGATQLIHEM 156


>ref|XP_002328520.1| predicted protein [Populus trichocarpa] gi|222838235|gb|EEE76600.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 30/78 (38%), Positives = 49/78 (62%)
 Frame = +3

Query: 3   AKEIFGSLFTKDLQPNTRTYKTGIN*F*KEGMRNDAQNLFSEMEEKGFVRDGYACNIVVQ 182
           AKE+F  LF   ++P+ RTY   I    KEG+ ++A  LF +ME+ GF+ D  + N+++Q
Sbjct: 385 AKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQ 444

Query: 183 GFFKENDIHKSVQLLNAM 236
           GF +  D   ++QL++ M
Sbjct: 445 GFLQNQDPSTAIQLIDEM 462


>ref|XP_002334555.1| predicted protein [Populus trichocarpa] gi|222873072|gb|EEF10203.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 31/78 (39%), Positives = 47/78 (60%)
 Frame = +3

Query: 3   AKEIFGSLFTKDLQPNTRTYKTGIN*F*KEGMRNDAQNLFSEMEEKGFVRDGYACNIVVQ 182
           A+E+F  LF K LQPN + Y T IN   KEG+ ++A   F  MEE G   D ++ N++++
Sbjct: 153 ARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVIIR 212

Query: 183 GFFKENDIHKSVQLLNAM 236
           GF +  D  ++V L+  M
Sbjct: 213 GFLQHKDESRAVHLIGEM 230


>ref|XP_002305931.1| predicted protein [Populus trichocarpa] gi|222848895|gb|EEE86442.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 31/78 (39%), Positives = 47/78 (60%)
 Frame = +3

Query: 3   AKEIFGSLFTKDLQPNTRTYKTGIN*F*KEGMRNDAQNLFSEMEEKGFVRDGYACNIVVQ 182
           A+E+F  LF K LQPN + Y T IN   KEG+ ++A   F  MEE G   D ++ N++++
Sbjct: 29  ARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVIIR 88

Query: 183 GFFKENDIHKSVQLLNAM 236
           GF +  D  ++V L+  M
Sbjct: 89  GFLQHKDESRAVHLIGEM 106


>ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|222838091|gb|EEE76456.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 32/94 (34%), Positives = 53/94 (56%)
 Frame = +3

Query: 3   AKEIFGSLFTKDLQPNTRTYKTGIN*F*KEGMRNDAQNLFSEMEEKGFVRDGYACNIVVQ 182
           AKE+F  LF   +QP  RTY   I    KEG+ ++A  LF +ME+ GF+ +  + N+++Q
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555

Query: 183 GFFKENDIHKSVQLLNAMP*DRLNLMHKPYQSWL 284
           GF +  D   +++L++ M   R +     +Q  L
Sbjct: 556 GFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589


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