BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009472
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]   233   9e-59
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   232   1e-58
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              232   1e-58
ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2...   209   9e-52
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   204   3e-50

>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
          Length = 435

 Score =  233 bits (593), Expect = 9e-59
 Identities = 142/291 (48%), Positives = 156/291 (53%), Gaps = 9/291 (3%)
 Frame = +1

Query: 28   RKNRLGLNKRNXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDL 207
            RKNRLGLNKR+                         WEHEEIFTDDDEAVGNDPEEREDL
Sbjct: 148  RKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDL 207

Query: 208  APEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387
            APEVPAPPEIKQ                                                
Sbjct: 208  APEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDE 267

Query: 388  XXIGLSPVLAPKQKDAPKEEPAENSPLKTTAGSARGTPXXXXXXXXXXXXXXDDVKAANG 567
              IGLSPVLAPKQKD PKEEPA+NSP+K+   SAR TP              DD+K  NG
Sbjct: 268  --IGLSPVLAPKQKDVPKEEPADNSPMKSAPASARSTPPTSKSSKGKRKSNGDDMKTTNG 325

Query: 568  TPPAKKVKTENEXXXXXXXXXXXXXXXXXVLKE---------AQPPAGPVTEDEIRTVLL 720
             PP KKVKTENE                   K          +   AGPVTEDEIR VLL
Sbjct: 326  GPP-KKVKTENESKSSAKDEGPSPSKVTATAKGTPSSSVKTGSTSSAGPVTEDEIRAVLL 384

Query: 721  QKPPVTTQDLVAKFKARLKTPKDKAAFAEILKKISKIQKTNGSSFVVLREK 873
            QK PVTTQDLVAKFKARLK+ +DK AFA+IL++ISKIQKTNG ++VVLR+K
Sbjct: 385  QKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 435


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  232 bits (592), Expect = 1e-58
 Identities = 142/291 (48%), Positives = 156/291 (53%), Gaps = 9/291 (3%)
 Frame = +1

Query: 28   RKNRLGLNKRNXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDL 207
            RKNRLGLNKR+                         WEHEEIFTDDDEAVGNDPEEREDL
Sbjct: 247  RKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDL 306

Query: 208  APEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387
            APEVPAPPEIKQ                                                
Sbjct: 307  APEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDE 366

Query: 388  XXIGLSPVLAPKQKDAPKEEPAENSPLKTTAGSARGTPXXXXXXXXXXXXXXDDVKAANG 567
              IGLSPVLAPKQKD PKEEPA+NSP+K+   SAR TP              DD+K  NG
Sbjct: 367  --IGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSNGDDMKTTNG 424

Query: 568  TPPAKKVKTENEXXXXXXXXXXXXXXXXXVLKE---------AQPPAGPVTEDEIRTVLL 720
             PP KKVKTENE                   K          +   AGPVTEDEIR VLL
Sbjct: 425  GPP-KKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAGPVTEDEIRAVLL 483

Query: 721  QKPPVTTQDLVAKFKARLKTPKDKAAFAEILKKISKIQKTNGSSFVVLREK 873
            QK PVTTQDLVAKFKARLK+ +DK AFA+IL++ISKIQKTNG ++VVLR+K
Sbjct: 484  QKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 534


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  232 bits (592), Expect = 1e-58
 Identities = 142/291 (48%), Positives = 156/291 (53%), Gaps = 9/291 (3%)
 Frame = +1

Query: 28   RKNRLGLNKRNXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDL 207
            RKNRLGLNKR+                         WEHEEIFTDDDEAVGNDPEEREDL
Sbjct: 252  RKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDL 311

Query: 208  APEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387
            APEVPAPPEIKQ                                                
Sbjct: 312  APEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDE 371

Query: 388  XXIGLSPVLAPKQKDAPKEEPAENSPLKTTAGSARGTPXXXXXXXXXXXXXXDDVKAANG 567
              IGLSPVLAPKQKD PKEEPA+NSP+K+   SAR TP              DD+K  NG
Sbjct: 372  --IGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSNGDDMKTTNG 429

Query: 568  TPPAKKVKTENEXXXXXXXXXXXXXXXXXVLKE---------AQPPAGPVTEDEIRTVLL 720
             PP KKVKTENE                   K          +   AGPVTEDEIR VLL
Sbjct: 430  GPP-KKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAGPVTEDEIRAVLL 488

Query: 721  QKPPVTTQDLVAKFKARLKTPKDKAAFAEILKKISKIQKTNGSSFVVLREK 873
            QK PVTTQDLVAKFKARLK+ +DK AFA+IL++ISKIQKTNG ++VVLR+K
Sbjct: 489  QKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 539


>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  209 bits (533), Expect = 9e-52
 Identities = 135/293 (46%), Positives = 151/293 (51%), Gaps = 11/293 (3%)
 Frame = +1

Query: 28   RKNRLGLNKRNXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDL 207
            RK+RLGLNK                           WEHEEIFTDDDEAV  DPEEREDL
Sbjct: 253  RKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDL 312

Query: 208  APEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387
            APEVPAPPEIKQ                                                
Sbjct: 313  APEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAEDDDDDDDMDDD 372

Query: 388  XXIGLSPVLAPKQKDA-PKEEPAENSPLKTTA-GSARGTPXXXXXXXXXXXXXXDDVKAA 561
                +SPVLAPKQKDA PKEEPA+NSP K T  GSA+GTP              DD K +
Sbjct: 373  ----ISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTS 428

Query: 562  NGTPPAKKVKTENEXXXXXXXXXXXXXXXXXVLK---------EAQPPAGPVTEDEIRTV 714
            NG P  KKVKTENE                   K             P GPVTE+EIR V
Sbjct: 429  NGAP-VKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAV 487

Query: 715  LLQKPPVTTQDLVAKFKARLKTPKDKAAFAEILKKISKIQKTNGSSFVVLREK 873
            LLQ  PVTTQDLVA+FK+RL+TP+DK AFA+IL++ISKIQKT+GS+FVVLR+K
Sbjct: 488  LLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDK 540


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  204 bits (520), Expect = 3e-50
 Identities = 132/289 (45%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
 Frame = +1

Query: 25   ARKNRLGLNKRNXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEERED 204
            ARKNRLGLNKR                          WEHEEIFTDDDEAVGND EERED
Sbjct: 250  ARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGNDREERED 309

Query: 205  LAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 384
            LAPEVPAPPEIKQ                                               
Sbjct: 310  LAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDDDDDDDMDE 369

Query: 385  XXXIGLSPVLAPKQKDAPKEEPAENSPLKT-TAGSARGTPXXXXXXXXXXXXXXDDVKAA 561
               + +SPVLAPKQ   PKEEPA+NSP K  T+ S++GTP              D+ K  
Sbjct: 370  D--VSISPVLAPKQ--TPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKRKLNSDEAKQT 425

Query: 562  NGTPPAKKVKTENEXXXXXXXXXXXXXXXXXVLKEAQPPA-----GPVTEDEIRTVLLQK 726
            N   P KKVKTENE                   K A P A      PVTE+EIR VLLQ 
Sbjct: 426  N-VAPQKKVKTENELKPTVKEESAPTSKSSATPKAAPPSAKTGSTSPVTEEEIRAVLLQN 484

Query: 727  PPVTTQDLVAKFKARLKTPKDKAAFAEILKKISKIQKTNGSSFVVLREK 873
             PVTTQDLVA+FK+RLK+ +DK AFA+IL++ISKIQKT+GSS+VVLR+K
Sbjct: 485  GPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRDK 533