BLASTX nr result

ID: Cimicifuga21_contig00009468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009468
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528386.1| eukaryotic translation initiation factor 3 s...   435   e-120
ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257...   431   e-118
emb|CBI36582.3| unnamed protein product [Vitis vinifera]              430   e-118
ref|XP_003522940.1| PREDICTED: protein KIAA0664 homolog [Glycine...   422   e-116
ref|XP_003525941.1| PREDICTED: protein KIAA0664 homolog [Glycine...   417   e-114

>ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223532174|gb|EEF33979.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1888

 Score =  435 bits (1118), Expect = e-120
 Identities = 218/296 (73%), Positives = 244/296 (82%), Gaps = 5/296 (1%)
 Frame = +3

Query: 15   GKLDTPVVDTAAEKEVSMCPPTKLGQFYDFFSFSHLTPPIQYIRRSSRPFVEEKTKDDFF 194
            GK  +  VD AA   VSMCPP +LGQFYDFFSFSHLTPP+ YIRRS+RPF+E+KT+DD+F
Sbjct: 187  GKEFSEKVDMAA---VSMCPPPRLGQFYDFFSFSHLTPPVHYIRRSTRPFLEDKTEDDYF 243

Query: 195  QIDVKVCSGKPVKIVASRKGFYPAGKHALISHSLVNLLQQISRTFDAAYKSLMKAFTEHN 374
            QIDV+VCSGKP+ IVAS+KGFYPAGK  L+ HSLV+LLQQISR FDAAYK+LMK+FTEHN
Sbjct: 244  QIDVRVCSGKPMTIVASKKGFYPAGKRTLLYHSLVSLLQQISRVFDAAYKALMKSFTEHN 303

Query: 375  KFGNLPYGFRANTWVVPPVVADNPSVFPSLPTEDETWXXXXXXXXXXXKHDSRQWAREFA 554
            KFGNLPYGFRANTWVVPPVVADNPSVFP LP EDE W           KHD R WA+EFA
Sbjct: 304  KFGNLPYGFRANTWVVPPVVADNPSVFPPLPVEDENWGGNGGGQGRDGKHDYRPWAKEFA 363

Query: 555  VLAAMPCKTLEERQIRDRKAFLLHSLFVDVSVFKAVAAIQRLING-----SCGMPSILHQ 719
            +LAAMPCKT EERQIRDRKAFLLHSLFVDVSVFKAVA I++++       +   PSILH+
Sbjct: 364  ILAAMPCKTAEERQIRDRKAFLLHSLFVDVSVFKAVALIKQIVEKNQYSLNDSTPSILHE 423

Query: 720  ERVGDLRITVTRDVPDATTKSDAKNDGSPASGKSPEELAQRNLLKGITADESATVH 887
            E+VGDL I VTRDVPDA+TK D KNDGS   G S E+LAQRNLLKGITADESATVH
Sbjct: 424  EKVGDLIIKVTRDVPDASTKLDCKNDGSRVLGMSQEDLAQRNLLKGITADESATVH 479


>ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera]
          Length = 1897

 Score =  431 bits (1107), Expect = e-118
 Identities = 214/298 (71%), Positives = 239/298 (80%), Gaps = 5/298 (1%)
 Frame = +3

Query: 9    KDGKLDTPVVDTAAEKEVSMCPPTKLGQFYDFFSFSHLTPPIQYIRRSSRPFVEEKTKDD 188
            K  K   P      +  VSMCPP +LGQFYDFFSFSHLTPPIQYIRRS+RPF+E+KT+DD
Sbjct: 180  KASKEAKPEESEKGDIAVSMCPPPRLGQFYDFFSFSHLTPPIQYIRRSTRPFLEDKTEDD 239

Query: 189  FFQIDVKVCSGKPVKIVASRKGFYPAGKHALISHSLVNLLQQISRTFDAAYKSLMKAFTE 368
             FQIDV+VCSGKP+ IVASRKGFYPAGK  L+SHSLV+LLQQISR FD+AYK+LMKAFTE
Sbjct: 240  LFQIDVRVCSGKPMTIVASRKGFYPAGKRLLLSHSLVSLLQQISRVFDSAYKALMKAFTE 299

Query: 369  HNKFGNLPYGFRANTWVVPPVVADNPSVFPSLPTEDETWXXXXXXXXXXXKHDSRQWARE 548
            HNKFGNLPYGFRANTWVVPPV+ADNPS FP LP EDE W           KHD RQWA+E
Sbjct: 300  HNKFGNLPYGFRANTWVVPPVIADNPSHFPPLPIEDENWGGNGGGQGRDGKHDHRQWAKE 359

Query: 549  FAVLAAMPCKTLEERQIRDRKAFLLHSLFVDVSVFKAVAAIQRLINGSCGMP-----SIL 713
            F++LAAMPCKT EERQIRDRKAFLLHSLFVDVSVFKAVAAI+ L+  +   P     ++ 
Sbjct: 360  FSILAAMPCKTAEERQIRDRKAFLLHSLFVDVSVFKAVAAIKHLMESNKCSPNGPNGTVF 419

Query: 714  HQERVGDLRITVTRDVPDATTKSDAKNDGSPASGKSPEELAQRNLLKGITADESATVH 887
            H+ER+GDL I VTRDVPDA+ K D KNDG    G S EEL+QRNLLKGITADESATVH
Sbjct: 420  HEERIGDLIIRVTRDVPDASLKLDGKNDGGQVLGMSKEELSQRNLLKGITADESATVH 477


>emb|CBI36582.3| unnamed protein product [Vitis vinifera]
          Length = 1034

 Score =  430 bits (1106), Expect = e-118
 Identities = 211/281 (75%), Positives = 235/281 (83%), Gaps = 5/281 (1%)
 Frame = +3

Query: 60   VSMCPPTKLGQFYDFFSFSHLTPPIQYIRRSSRPFVEEKTKDDFFQIDVKVCSGKPVKIV 239
            VSMCPP +LGQFYDFFSFSHLTPPIQYIRRS+RPF+E+KT+DD FQIDV+VCSGKP+ IV
Sbjct: 175  VSMCPPPRLGQFYDFFSFSHLTPPIQYIRRSTRPFLEDKTEDDLFQIDVRVCSGKPMTIV 234

Query: 240  ASRKGFYPAGKHALISHSLVNLLQQISRTFDAAYKSLMKAFTEHNKFGNLPYGFRANTWV 419
            ASRKGFYPAGK  L+SHSLV+LLQQISR FD+AYK+LMKAFTEHNKFGNLPYGFRANTWV
Sbjct: 235  ASRKGFYPAGKRLLLSHSLVSLLQQISRVFDSAYKALMKAFTEHNKFGNLPYGFRANTWV 294

Query: 420  VPPVVADNPSVFPSLPTEDETWXXXXXXXXXXXKHDSRQWAREFAVLAAMPCKTLEERQI 599
            VPPV+ADNPS FP LP EDE W           KHD RQWA+EF++LAAMPCKT EERQI
Sbjct: 295  VPPVIADNPSHFPPLPIEDENWGGNGGGQGRDGKHDHRQWAKEFSILAAMPCKTAEERQI 354

Query: 600  RDRKAFLLHSLFVDVSVFKAVAAIQRLINGSCGMP-----SILHQERVGDLRITVTRDVP 764
            RDRKAFLLHSLFVDVSVFKAVAAI+ L+  +   P     ++ H+ER+GDL I VTRDVP
Sbjct: 355  RDRKAFLLHSLFVDVSVFKAVAAIKHLMESNKCSPNGPNGTVFHEERIGDLIIRVTRDVP 414

Query: 765  DATTKSDAKNDGSPASGKSPEELAQRNLLKGITADESATVH 887
            DA+ K D KNDG    G S EEL+QRNLLKGITADESATVH
Sbjct: 415  DASLKLDGKNDGGQVLGMSKEELSQRNLLKGITADESATVH 455


>ref|XP_003522940.1| PREDICTED: protein KIAA0664 homolog [Glycine max]
          Length = 1855

 Score =  422 bits (1084), Expect = e-116
 Identities = 206/286 (72%), Positives = 238/286 (83%), Gaps = 6/286 (2%)
 Frame = +3

Query: 48   AEKEVSMCPPTKLGQFYDFFSFSHLTPPIQYIRRSSRPFVEEKTKDDFFQIDVKVCSGKP 227
            A+ ++SMCPP +LGQFYDFFSFSHLTPP QYIRRS+RPF+E+KT+DDFFQID++VCSGKP
Sbjct: 169  ADADISMCPPPRLGQFYDFFSFSHLTPPFQYIRRSNRPFLEDKTEDDFFQIDIRVCSGKP 228

Query: 228  VKIVASRKGFYPAGKHALISHSLVNLLQQISRTFDAAYKSLMKAFTEHNKFGNLPYGFRA 407
              IVASR GFYPAGK  L++H+LV LLQQISR FDAAYK+LMK FTEHNKFGNLPYGFRA
Sbjct: 229  TTIVASRIGFYPAGKRPLVTHTLVGLLQQISRVFDAAYKALMKTFTEHNKFGNLPYGFRA 288

Query: 408  NTWVVPPVVADNPSVFPSLPTEDETWXXXXXXXXXXXKHDSRQWAREFAVLAAMPCKTLE 587
            NTWVVPPVV+DNPSVFP LP EDETW           KH++RQWAR+FA+LAAMPC+T E
Sbjct: 289  NTWVVPPVVSDNPSVFPPLPMEDETWGGNGGGQGRDGKHENRQWARDFAILAAMPCQTAE 348

Query: 588  ERQIRDRKAFLLHSLFVDVSVFKAVAAIQRLIN------GSCGMPSILHQERVGDLRITV 749
            ERQIRDRKAFLLHSLFVDVSVFKAV+AI+ L++       +  +P+  ++ER+GDL I V
Sbjct: 349  ERQIRDRKAFLLHSLFVDVSVFKAVSAIKHLVDIKQNSFSNSALPT-SYEERIGDLTIKV 407

Query: 750  TRDVPDATTKSDAKNDGSPASGKSPEELAQRNLLKGITADESATVH 887
            TRDV DA+ K D KNDG+   G S EELAQRNLLKGITADESATVH
Sbjct: 408  TRDVSDASLKLDCKNDGNRVLGLSDEELAQRNLLKGITADESATVH 453


>ref|XP_003525941.1| PREDICTED: protein KIAA0664 homolog [Glycine max]
          Length = 1859

 Score =  417 bits (1072), Expect = e-114
 Identities = 206/286 (72%), Positives = 237/286 (82%), Gaps = 6/286 (2%)
 Frame = +3

Query: 48   AEKEVSMCPPTKLGQFYDFFSFSHLTPPIQYIRRSSRPFVEEKTKDDFFQIDVKVCSGKP 227
            A+ ++SMCPP +LGQFYDFFSF HLTPP QYIRRS+RPF+E+KT+DDFFQIDV+VCSGKP
Sbjct: 175  ADADISMCPPPRLGQFYDFFSFWHLTPPFQYIRRSNRPFLEDKTEDDFFQIDVRVCSGKP 234

Query: 228  VKIVASRKGFYPAGKHALISHSLVNLLQQISRTFDAAYKSLMKAFTEHNKFGNLPYGFRA 407
              IVASR GFYPAGK  L+SH+LV LLQQISR FDAAYK+LMKAFTEHNKFGNLPYGFRA
Sbjct: 235  TTIVASRIGFYPAGKRPLVSHTLVGLLQQISRVFDAAYKALMKAFTEHNKFGNLPYGFRA 294

Query: 408  NTWVVPPVVADNPSVFPSLPTEDETWXXXXXXXXXXXKHDSRQWAREFAVLAAMPCKTLE 587
            NTWVVPPVV+DNPSVF  LP EDETW           KH++RQWAR+FA+LAAMPC+T E
Sbjct: 295  NTWVVPPVVSDNPSVFLPLPMEDETWGGNGGGQGRDGKHENRQWARDFAILAAMPCQTAE 354

Query: 588  ERQIRDRKAFLLHSLFVDVSVFKAVAAIQRLIN------GSCGMPSILHQERVGDLRITV 749
            ERQIRDRKAFLLHSLFVDVSVFKAV+AI+ L++       +  +P+  ++ER+GDL I V
Sbjct: 355  ERQIRDRKAFLLHSLFVDVSVFKAVSAIKHLVDIKQNSFSNSALPT-SYEERIGDLTIKV 413

Query: 750  TRDVPDATTKSDAKNDGSPASGKSPEELAQRNLLKGITADESATVH 887
            TRDV DA+ K D KNDG+   G S +ELAQRNLLKGITADESATVH
Sbjct: 414  TRDVSDASLKLDCKNDGNRVLGLSDDELAQRNLLKGITADESATVH 459


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