BLASTX nr result

ID: Cimicifuga21_contig00009466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009466
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236940.1| uncharacterized protein LOC100527245 [Glycin...   163   2e-38
ref|NP_001236314.1| uncharacterized protein LOC100499808 [Glycin...   163   3e-38
ref|XP_004155214.1| PREDICTED: cytochrome c oxidase subunit 6a, ...   157   1e-36
ref|XP_002531993.1| cytochrome-c oxidase, putative [Ricinus comm...   148   9e-34
gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK4372...   147   2e-33

>ref|NP_001236940.1| uncharacterized protein LOC100527245 [Glycine max]
           gi|255631866|gb|ACU16300.1| unknown [Glycine max]
          Length = 102

 Score =  163 bits (413), Expect = 2e-38
 Identities = 77/102 (75%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
 Frame = +3

Query: 39  MSMAMVRSGF-QAALRRGGRNVQ-SKRGFASSSHHDDAYETAKWEKITYAGIVACTILAC 212
           M+ ++VRSGF ++ALR   R  Q  KR FASS HHDDAYETAKWEKITY GIV+CT LA 
Sbjct: 1   MATSLVRSGFLRSALRGSARGSQVPKRNFASSGHHDDAYETAKWEKITYLGIVSCTGLAV 60

Query: 213 YNLSKGHPHFDEPPPYPYMHIRNKEFPWGPDGLFEVKHHGEH 338
           YNLSKGHPHF EPP YPY+HIRNKEFPWGPDGLFE KHH EH
Sbjct: 61  YNLSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETKHHEEH 102


>ref|NP_001236314.1| uncharacterized protein LOC100499808 [Glycine max]
           gi|255626789|gb|ACU13739.1| unknown [Glycine max]
          Length = 102

 Score =  163 bits (412), Expect = 3e-38
 Identities = 77/102 (75%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
 Frame = +3

Query: 39  MSMAMVRSGF-QAALRRGGRNVQ-SKRGFASSSHHDDAYETAKWEKITYAGIVACTILAC 212
           M+ ++VRSGF ++ALR   R+ Q  KR FASS HHDDAYETAKWEKITY GIV CT LA 
Sbjct: 1   MATSLVRSGFLRSALRGRARSSQVPKRNFASSGHHDDAYETAKWEKITYLGIVGCTGLAV 60

Query: 213 YNLSKGHPHFDEPPPYPYMHIRNKEFPWGPDGLFEVKHHGEH 338
           YNLSKGHPHF EPP YPY+HIRNKEFPWGPDGLFE KHH EH
Sbjct: 61  YNLSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETKHHDEH 102


>ref|XP_004155214.1| PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 98

 Score =  157 bits (398), Expect = 1e-36
 Identities = 78/99 (78%), Positives = 84/99 (84%), Gaps = 2/99 (2%)
 Frame = +3

Query: 39  MSMAMVRSGF-QAALRRGGRN-VQSKRGFASSSHHDDAYETAKWEKITYAGIVACTILAC 212
           M+MA +RS   +AALR   RN VQ KRGFASS+H DDA ETAKWEKITYAGIV C+ILA 
Sbjct: 1   MAMASIRSNLLRAALRGASRNSVQPKRGFASSAH-DDARETAKWEKITYAGIVTCSILAF 59

Query: 213 YNLSKGHPHFDEPPPYPYMHIRNKEFPWGPDGLFEVKHH 329
           YNLSKGHPH +EPP YPYMHIRNKEFPWGPDGLFEVKHH
Sbjct: 60  YNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVKHH 98


>ref|XP_002531993.1| cytochrome-c oxidase, putative [Ricinus communis]
           gi|223528352|gb|EEF30392.1| cytochrome-c oxidase,
           putative [Ricinus communis]
          Length = 101

 Score =  148 bits (373), Expect = 9e-34
 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 4/101 (3%)
 Frame = +3

Query: 39  MSMAMVRSGFQAALRRGGR-NVQSKRGFASSSHHDDAYETA---KWEKITYAGIVACTIL 206
           M+ A++RSG + ALR G + +   KR F+SS+HHDDAYE A   KWEKITY  I +C+IL
Sbjct: 1   MATALMRSGLRNALRGGSKPSAPLKRRFSSSAHHDDAYEAAEASKWEKITYVAIASCSIL 60

Query: 207 ACYNLSKGHPHFDEPPPYPYMHIRNKEFPWGPDGLFEVKHH 329
           A YNLSKGHPH +EPP YPYMHIRNKEFPWGPDGLFE KHH
Sbjct: 61  AIYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFESKHH 101


>gb|AFK34929.1| unknown [Lotus japonicus] gi|388511333|gb|AFK43728.1| unknown
           [Lotus japonicus]
          Length = 102

 Score =  147 bits (371), Expect = 2e-33
 Identities = 69/104 (66%), Positives = 78/104 (75%), Gaps = 3/104 (2%)
 Frame = +3

Query: 39  MSMAMVRSGFQAALRRGGR---NVQSKRGFASSSHHDDAYETAKWEKITYAGIVACTILA 209
           M+ A+VRS       RGG    ++  KR F+SS  HDDAYETAKWEKITY GI +CT LA
Sbjct: 1   MASALVRSALLRTTLRGGARGGSLTPKRNFSSSGGHDDAYETAKWEKITYLGIASCTALA 60

Query: 210 CYNLSKGHPHFDEPPPYPYMHIRNKEFPWGPDGLFEVKHHGEHH 341
            Y LSKGHPH++EPP YPY+HIRNKEFPWGPDGLFE KH  EHH
Sbjct: 61  AYCLSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFETKH--EHH 102


Top