BLASTX nr result

ID: Cimicifuga21_contig00009445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009445
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40413.1| unknown [Lotus japonicus]                               68   9e-10
emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]    68   9e-10
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    67   2e-09
ref|XP_003637128.1| F-box family protein [Medicago truncatula] g...    65   6e-09
emb|CBI28933.3| unnamed protein product [Vitis vinifera]               65   6e-09

>gb|AFK40413.1| unknown [Lotus japonicus]
          Length = 354

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
 Frame = +3

Query: 60  LPQDLTSDILLRLPIKSVMRCRCVCKAWRTLLNDPHFINMH--LTRSSLAKNLSLLLFTM 233
           LPQDL + ILLRLP+KS++R + VCK WR+L++DPHF   H  L    L  N  L + TM
Sbjct: 8   LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQTM 67

Query: 234 DITSGDKRNHSTPDKRNYSTPVKVVSFNVY 323
           D+   D   HS P     S P+ V   + Y
Sbjct: 68  DL---DGWLHSNP----ISEPINVDFLSTY 90


>emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]
          Length = 485

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = +3

Query: 81  DILLRLPIKSVMRCRCVCKAWRTLLNDPHFINMHLTRSSLAKNLSLLL 224
           D+LLRLP+KS++R +CVC++W+TL NDP FINMHL R+    N  +LL
Sbjct: 90  DVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMHLRRAITHNNCCMLL 137


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/56 (46%), Positives = 43/56 (76%)
 Frame = +3

Query: 60  LPQDLTSDILLRLPIKSVMRCRCVCKAWRTLLNDPHFINMHLTRSSLAKNLSLLLF 227
           LP ++ ++IL RLP++S+M+ +CVCK+W T+++DP FI MHL RS+   N S++ +
Sbjct: 94  LPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARNPNFSVVSY 149


>ref|XP_003637128.1| F-box family protein [Medicago truncatula]
           gi|355503063|gb|AES84266.1| F-box family protein
           [Medicago truncatula]
          Length = 230

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 25/45 (55%), Positives = 35/45 (77%)
 Frame = +3

Query: 60  LPQDLTSDILLRLPIKSVMRCRCVCKAWRTLLNDPHFINMHLTRS 194
           LP  + +D+LLRLPIKSV+ C+CVC+ W T+++DPHF  +H  RS
Sbjct: 92  LPFPIATDVLLRLPIKSVLVCKCVCRTWNTVISDPHFAKVHFERS 136


>emb|CBI28933.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = +3

Query: 81  DILLRLPIKSVMRCRCVCKAWRTLLNDPHFINMHLTRSSLAKNLSLLL 224
           D+LLRLP+KS++R +CVC++W+TL NDP FINM+L R+    N  +LL
Sbjct: 28  DVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMNLRRAITHNNCCMLL 75


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