BLASTX nr result

ID: Cimicifuga21_contig00009437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009437
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330690.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
ref|XP_002277983.1| PREDICTED: uncharacterized protein LOC100252...    76   6e-12
ref|XP_002462669.1| hypothetical protein SORBIDRAFT_02g029940 [S...    75   1e-11
ref|NP_001236138.1| uncharacterized protein LOC100527185 [Glycin...    75   1e-11
ref|XP_003518878.1| PREDICTED: uncharacterized protein LOC100816...    75   2e-11

>ref|XP_002330690.1| predicted protein [Populus trichocarpa] gi|222872294|gb|EEF09425.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 56/115 (48%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = -3

Query: 564 RAKKKSTLPHFGFQPHCRNLQHGLIQA--GAEKSFA-KPIDSRRTFIWGLIGVATGINLS 394
           ++KK S +P  GFQ          ++A  G  K F+   +  RRT   GL G  TG+N+ 
Sbjct: 19  KSKKTSPVPSPGFQR---------VRACHGDSKPFSDNKLVHRRTIALGLAGALTGLNIG 69

Query: 393 SQNADAAQKRAXXXXPKEKNDPSVTGVLAKVLASKKRKEAMKEEVARLREKGKLI 229
             NA+AA +R     P EK DPS++G+ AKVLASKKRKEAMKEEVAR+REKGK +
Sbjct: 70  GWNANAAARRPPPPPPGEKKDPSISGLQAKVLASKKRKEAMKEEVARIREKGKAV 124


>ref|XP_002277983.1| PREDICTED: uncharacterized protein LOC100252564 [Vitis vinifera]
           gi|296084317|emb|CBI24705.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
 Frame = -3

Query: 525 QPHCRNLQHGLIQAGAEKSFAKPIDSR----RTFIWGLIGVATGINLSSQNADAAQKRAX 358
           +PH   L    +     +S A+ +D R    R    GL+G   G++  +Q+A AA +R  
Sbjct: 23  KPHLHTLGFERVWVSHHQSSAQALDDRLIHRRNISLGLLGAVLGLSSGNQSARAA-RRPP 81

Query: 357 XXXPKEKNDPSVTGVLAKVLASKKRKEAMKEEVARLREKGKLI 229
              P+EK DP+++GV AKVLASKKRKEAMKE +A+LRE+GK I
Sbjct: 82  PPPPQEKQDPNLSGVQAKVLASKKRKEAMKETMAKLREQGKAI 124


>ref|XP_002462669.1| hypothetical protein SORBIDRAFT_02g029940 [Sorghum bicolor]
           gi|241926046|gb|EER99190.1| hypothetical protein
           SORBIDRAFT_02g029940 [Sorghum bicolor]
          Length = 116

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = -3

Query: 453 DSRRTFIWGLIGVATGINLSSQNADAAQKRAXXXXP--KEKNDPSVTGVLAKVLASKKRK 280
           D+RR  + GL+  A G  LS   A AA KR        +EK DP+V+GV AKVLAS+KRK
Sbjct: 38  DNRRALLCGLVAAAAGTVLSPDIAGAASKRRPPPPGPAEEKKDPNVSGVQAKVLASRKRK 97

Query: 279 EAMKEEVARLREKGKLIE 226
           EAMKE VA+LRE+GK ++
Sbjct: 98  EAMKEAVAKLRERGKPVD 115


>ref|NP_001236138.1| uncharacterized protein LOC100527185 [Glycine max]
           gi|255631738|gb|ACU16236.1| unknown [Glycine max]
          Length = 155

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = -3

Query: 447 RRTFIWGLIGVAT-GINLSS-QNADAAQKRAXXXXPKEKNDPSVTGVLAKVLASKKRKEA 274
           RR  + GL G AT G++LS  Q+A  A +R     P EK DP+V+GV AKVLASK+RKEA
Sbjct: 69  RRRTLMGLSGAATLGLSLSDEQSARGAARRPPPPPPTEKKDPNVSGVQAKVLASKRRKEA 128

Query: 273 MKEEVARLREKGK 235
           MKEEVARLRE+GK
Sbjct: 129 MKEEVARLRERGK 141


>ref|XP_003518878.1| PREDICTED: uncharacterized protein LOC100816211 [Glycine max]
          Length = 160

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
 Frame = -3

Query: 459 PIDS---RRTFIWGLIGVAT-GINLSS-QNADAAQKRAXXXXPKEKNDPSVTGVLAKVLA 295
           P+D+   RR  + GL G A  G++LS  Q+A  A +R     P EK DP+V+GV AKVLA
Sbjct: 65  PLDNHSLRRRTLMGLSGAAMLGLSLSDEQSASGAARRPPPPPPTEKKDPNVSGVQAKVLA 124

Query: 294 SKKRKEAMKEEVARLREKGKLI 229
           SK+RKEAMKEEVARLRE+GK +
Sbjct: 125 SKRRKEAMKEEVARLRERGKSV 146


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