BLASTX nr result

ID: Cimicifuga21_contig00009418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009418
         (2037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34862.3| unnamed protein product [Vitis vinifera]              316   2e-83
ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homol...   308   4e-81
ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleop...   304   5e-80
gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK4217...   303   1e-79
ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycin...   300   1e-78

>emb|CBI34862.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  316 bits (809), Expect = 2e-83
 Identities = 155/219 (70%), Positives = 179/219 (81%), Gaps = 2/219 (0%)
 Frame = -3

Query: 1867 EASSDGEGNDVKPSEHTEGE--KFQPHTGDGASPGKIFIGGLAKETTPVQFNKHFGQYGE 1694
            EA  DGE NDVK S HT+    K  PHTGDGASPGKIFIGGLA+ETT  QF KHFG+YGE
Sbjct: 7    EAILDGETNDVKSSHHTDDNDSKPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGE 66

Query: 1693 ITDSVIMKDRRSGQPRGFGFVTYADPSVVDKVIEDNHVINGKQVEIKRTIPKGSVNSKDI 1514
            ITDSVIMKDR++GQPRGFGFVTYAD SVVD+VI+D HVINGKQVEIKRTIPKG++ +KD 
Sbjct: 67   ITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVINGKQVEIKRTIPKGAIGAKDF 126

Query: 1513 KTKKIFVGGIPTTVTEDEFKDFFAKYGEVEEHMIMRDHATSRSRGFGFITFGNEESVDTL 1334
            KTKKIFVGGIP TVTE+EFKDFF +YGEV++H IMRDH+TSRSRGFGF+TF  E++VD L
Sbjct: 127  KTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDL 186

Query: 1333 LSKGNRIELAGTQVEIXXXXXXXXXXXPSSGKRFNDSRP 1217
            LS+GN++ELAG QVEI               +R++DSRP
Sbjct: 187  LSQGNKLELAGAQVEIKKAEPKKPNPPVPPSRRYSDSRP 225


>ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
            max]
          Length = 372

 Score =  308 bits (789), Expect = 4e-81
 Identities = 155/222 (69%), Positives = 181/222 (81%), Gaps = 4/222 (1%)
 Frame = -3

Query: 1873 SNEASSDGEGND-VKPSEHTEGE-KFQPHTGDGASPGKIFIGGLAKETTPVQFNKHFGQY 1700
            SN  + DG+ ND V+P  H + + K QP TGDGASPGKIFIGGLA+ETT  QF KHFG+Y
Sbjct: 6    SNHHAVDGDANDLVRPFSHRDDDGKPQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKY 65

Query: 1699 GEITDSVIMKDRRSGQPRGFGFVTYADPSVVDKVIEDNHVINGKQVEIKRTIPKGSV--N 1526
            GEITDSVIMKDR++GQPRGFGF+TYADPSVVD VIED H+INGKQVEIKRTIP+G+V  N
Sbjct: 66   GEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKRTIPRGAVGSN 125

Query: 1525 SKDIKTKKIFVGGIPTTVTEDEFKDFFAKYGEVEEHMIMRDHATSRSRGFGFITFGNEES 1346
            SKD +TKKIFVGGIP+TVTEDEF+DFF +YGEV++H IMRDH+T+RSRGFGFIT+ +EE+
Sbjct: 126  SKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEA 185

Query: 1345 VDTLLSKGNRIELAGTQVEIXXXXXXXXXXXPSSGKRFNDSR 1220
            VD LLS GN+IE AG QVEI             S KR+NDSR
Sbjct: 186  VDDLLSVGNKIEFAGAQVEIKKAEPKKPNPPAPSSKRYNDSR 227


>ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog 2-like
            [Glycine max]
          Length = 374

 Score =  304 bits (779), Expect = 5e-80
 Identities = 154/224 (68%), Positives = 178/224 (79%), Gaps = 6/224 (2%)
 Frame = -3

Query: 1873 SNEASSDGEGNDVKPS----EHTEGEKFQPHTGDGASPGKIFIGGLAKETTPVQFNKHFG 1706
            SN  + DG+ NDV  S    +  E  K QP TGDGASPGKIFIGGLA+ETT  QF KHFG
Sbjct: 6    SNHHAVDGDANDVVRSFSHRDDDEDGKPQPLTGDGASPGKIFIGGLARETTIAQFIKHFG 65

Query: 1705 QYGEITDSVIMKDRRSGQPRGFGFVTYADPSVVDKVIEDNHVINGKQVEIKRTIPKGSV- 1529
            +YGEITDSVIMKDR++GQPRGFGF+TYADPSVVD VIED H+INGKQVEIKRTIP+G+  
Sbjct: 66   KYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKRTIPRGAAG 125

Query: 1528 -NSKDIKTKKIFVGGIPTTVTEDEFKDFFAKYGEVEEHMIMRDHATSRSRGFGFITFGNE 1352
             NSKD +TKKIFVGGIP+TVTEDEF+DFF +YGEV++H IMRDH+T+RSRGFGFIT+ +E
Sbjct: 126  SNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSE 185

Query: 1351 ESVDTLLSKGNRIELAGTQVEIXXXXXXXXXXXPSSGKRFNDSR 1220
            E+VD LLS GN+IE AG QVEI             S KR+NDSR
Sbjct: 186  EAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPPAPSSKRYNDSR 229


>gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK42175.1| unknown [Lotus
            japonicus]
          Length = 373

 Score =  303 bits (775), Expect = 1e-79
 Identities = 149/216 (68%), Positives = 174/216 (80%), Gaps = 5/216 (2%)
 Frame = -3

Query: 1852 GEGNDVKPS-----EHTEGEKFQPHTGDGASPGKIFIGGLAKETTPVQFNKHFGQYGEIT 1688
            GE NDV  +     +H +    QP TGDGASPGKIFIGGLA+ETT  QF KHFG+YGEIT
Sbjct: 13   GESNDVARTYSHREDHDQHHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEIT 72

Query: 1687 DSVIMKDRRSGQPRGFGFVTYADPSVVDKVIEDNHVINGKQVEIKRTIPKGSVNSKDIKT 1508
            DSVIMKDR++ QPRGFGF+TYADPSVVDKVIED H+INGKQVEIKRTIP+G+V SKD KT
Sbjct: 73   DSVIMKDRKTAQPRGFGFITYADPSVVDKVIEDTHIINGKQVEIKRTIPRGAVGSKDFKT 132

Query: 1507 KKIFVGGIPTTVTEDEFKDFFAKYGEVEEHMIMRDHATSRSRGFGFITFGNEESVDTLLS 1328
            KKIFVGGIP+ VTEDEF+DFF +YGEV+++ IMRDH+T+RSRGFGFITF +E++VD LLS
Sbjct: 133  KKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLS 192

Query: 1327 KGNRIELAGTQVEIXXXXXXXXXXXPSSGKRFNDSR 1220
             GN+I+ AGTQVEI             S KR+NDSR
Sbjct: 193  MGNKIDFAGTQVEIKKAEPKKPNPPTPSSKRYNDSR 228


>ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
            gi|255636483|gb|ACU18580.1| unknown [Glycine max]
          Length = 377

 Score =  300 bits (768), Expect = 1e-78
 Identities = 151/212 (71%), Positives = 172/212 (81%), Gaps = 2/212 (0%)
 Frame = -3

Query: 1849 EGNDVKP--SEHTEGEKFQPHTGDGASPGKIFIGGLAKETTPVQFNKHFGQYGEITDSVI 1676
            E NDV    S   E    QP TGDGASPGKIFIGGLA+ETT  QF KHFG+YGEITDSVI
Sbjct: 14   EPNDVVTPFSHREEPHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVI 73

Query: 1675 MKDRRSGQPRGFGFVTYADPSVVDKVIEDNHVINGKQVEIKRTIPKGSVNSKDIKTKKIF 1496
            MKDR++GQPRGFGF+TYADPSVVDKVIE+ HVINGKQVEIKRTIP+G+V SKD +TKKIF
Sbjct: 74   MKDRKTGQPRGFGFITYADPSVVDKVIEEPHVINGKQVEIKRTIPRGAVGSKDFRTKKIF 133

Query: 1495 VGGIPTTVTEDEFKDFFAKYGEVEEHMIMRDHATSRSRGFGFITFGNEESVDTLLSKGNR 1316
            VGGIP+ VTEDEF+DFF +YGEV++H IMRDH+T+RSRGFGFITF +EE+VD LLS GN+
Sbjct: 134  VGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLSMGNK 193

Query: 1315 IELAGTQVEIXXXXXXXXXXXPSSGKRFNDSR 1220
            I+ AG QVEI           P S KR+NDSR
Sbjct: 194  IDFAGAQVEIKKAEPKKPNSAPPSSKRYNDSR 225


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