BLASTX nr result
ID: Cimicifuga21_contig00009401
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00009401 (836 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis] 90 5e-16 ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like... 87 5e-15 ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|1... 86 1e-14 ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit... 85 2e-14 emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera] 85 2e-14 >gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis] Length = 151 Score = 90.1 bits (222), Expect = 5e-16 Identities = 47/107 (43%), Positives = 55/107 (51%), Gaps = 2/107 (1%) Frame = -1 Query: 665 YGTFQG--QYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXYHGYQAVQGYAVVEGIPKR 492 YGTFQG Y PVPPPG T S+ + YQ V GYAV EG P R Sbjct: 21 YGTFQGVANYPPPHHQPVIGFPQPVPPPGATEPSSPLPPYYAYAYQTVPGYAVAEGRPVR 80 Query: 491 ERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351 ERRL CC IPWY+G +++CA++DPREKPGY Sbjct: 81 ERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFVLLCARIDPREKPGY 127 >ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max] Length = 160 Score = 87.0 bits (214), Expect = 5e-15 Identities = 51/107 (47%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Frame = -1 Query: 665 YGTFQG--QYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXYHGYQAVQGYAVVEGIPKR 492 YGTFQG Y PVPPPG SSA GYQAV GYAV EG P R Sbjct: 30 YGTFQGVANYPPPQPHPAIGFPHPVPPPGAVDSSAPPPPYYP-GYQAVPGYAVAEGRPVR 88 Query: 491 ERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351 ERRL CC IPWY+GA I++C++VD REKPGY Sbjct: 89 ERRLGCCGLGCGWCLFILGFFLAGIPWYVGAIIMLCSRVDYREKPGY 135 >ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|118486768|gb|ABK95219.1| unknown [Populus trichocarpa] gi|222846181|gb|EEE83728.1| predicted protein [Populus trichocarpa] Length = 156 Score = 85.5 bits (210), Expect = 1e-14 Identities = 49/107 (45%), Positives = 53/107 (49%), Gaps = 2/107 (1%) Frame = -1 Query: 665 YGTFQG--QYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXYHGYQAVQGYAVVEGIPKR 492 YGTFQG Y PVPPPG+TA GYQ V GYAV EG P R Sbjct: 31 YGTFQGVANYPPPSQSHVIGFPQPVPPPGITAEP------YAQGYQTVPGYAVAEGRPVR 84 Query: 491 ERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351 +RRL CC IPWYIG II C ++DPREKPGY Sbjct: 85 QRRLPCCGCGVGWFLFIIGFFLGAIPWYIGLFIIACMRIDPREKPGY 131 >ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera] gi|296082825|emb|CBI22126.3| unnamed protein product [Vitis vinifera] Length = 143 Score = 84.7 bits (208), Expect = 2e-14 Identities = 49/110 (44%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Frame = -1 Query: 671 QVYGTFQGQYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXY---HGYQAVQGYAVVEGI 501 Q YGTFQG PVPPPG SA HGYQAV GYAV EG Sbjct: 11 QHYGTFQG-VPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAEGT 69 Query: 500 PKRERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351 P RERRL CC +PWY+G +++CA+VD REKPGY Sbjct: 70 PVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGY 119 >emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera] Length = 141 Score = 84.7 bits (208), Expect = 2e-14 Identities = 49/110 (44%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Frame = -1 Query: 671 QVYGTFQGQYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXY---HGYQAVQGYAVVEGI 501 Q YGTFQG PVPPPG SA HGYQAV GYAV EG Sbjct: 11 QHYGTFQG-VPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAEGT 69 Query: 500 PKRERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351 P RERRL CC +PWY+G +++CA+VD REKPGY Sbjct: 70 PVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGY 119