BLASTX nr result

ID: Cimicifuga21_contig00009401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009401
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]        90   5e-16
ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like...    87   5e-15
ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|1...    86   1e-14
ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...    85   2e-14
emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]    85   2e-14

>gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]
          Length = 151

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 47/107 (43%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = -1

Query: 665 YGTFQG--QYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXYHGYQAVQGYAVVEGIPKR 492
           YGTFQG   Y             PVPPPG T  S+       + YQ V GYAV EG P R
Sbjct: 21  YGTFQGVANYPPPHHQPVIGFPQPVPPPGATEPSSPLPPYYAYAYQTVPGYAVAEGRPVR 80

Query: 491 ERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351
           ERRL CC                 IPWY+G  +++CA++DPREKPGY
Sbjct: 81  ERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFVLLCARIDPREKPGY 127


>ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max]
          Length = 160

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 51/107 (47%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
 Frame = -1

Query: 665 YGTFQG--QYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXYHGYQAVQGYAVVEGIPKR 492
           YGTFQG   Y             PVPPPG   SSA        GYQAV GYAV EG P R
Sbjct: 30  YGTFQGVANYPPPQPHPAIGFPHPVPPPGAVDSSAPPPPYYP-GYQAVPGYAVAEGRPVR 88

Query: 491 ERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351
           ERRL CC                 IPWY+GA I++C++VD REKPGY
Sbjct: 89  ERRLGCCGLGCGWCLFILGFFLAGIPWYVGAIIMLCSRVDYREKPGY 135


>ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|118486768|gb|ABK95219.1|
           unknown [Populus trichocarpa]
           gi|222846181|gb|EEE83728.1| predicted protein [Populus
           trichocarpa]
          Length = 156

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 49/107 (45%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
 Frame = -1

Query: 665 YGTFQG--QYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXYHGYQAVQGYAVVEGIPKR 492
           YGTFQG   Y             PVPPPG+TA           GYQ V GYAV EG P R
Sbjct: 31  YGTFQGVANYPPPSQSHVIGFPQPVPPPGITAEP------YAQGYQTVPGYAVAEGRPVR 84

Query: 491 ERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351
           +RRL CC                 IPWYIG  II C ++DPREKPGY
Sbjct: 85  QRRLPCCGCGVGWFLFIIGFFLGAIPWYIGLFIIACMRIDPREKPGY 131


>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 49/110 (44%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
 Frame = -1

Query: 671 QVYGTFQGQYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXY---HGYQAVQGYAVVEGI 501
           Q YGTFQG               PVPPPG    SA          HGYQAV GYAV EG 
Sbjct: 11  QHYGTFQG-VPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAEGT 69

Query: 500 PKRERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351
           P RERRL CC                 +PWY+G  +++CA+VD REKPGY
Sbjct: 70  PVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGY 119


>emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]
          Length = 141

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 49/110 (44%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
 Frame = -1

Query: 671 QVYGTFQGQYXXXXXXXXXXXXXPVPPPGVTASSAXXXXXXY---HGYQAVQGYAVVEGI 501
           Q YGTFQG               PVPPPG    SA          HGYQAV GYAV EG 
Sbjct: 11  QHYGTFQG-VPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPGYAVAEGT 69

Query: 500 PKRERRLCCCXXXXXXXXXXXXXXXXXIPWYIGAAIIICAQVDPREKPGY 351
           P RERRL CC                 +PWY+G  +++CA+VD REKPGY
Sbjct: 70  PVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGY 119


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