BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009391
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|2...   600   e-169
ref|XP_002519926.1| pentatricopeptide repeat-containing protein,...   595   e-168
ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containi...   570   e-160
ref|XP_003629008.1| Pentatricopeptide repeat-containing protein ...   554   e-155
ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containi...   553   e-155

>ref|XP_002303222.1| predicted protein [Populus trichocarpa] gi|222840654|gb|EEE78201.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  600 bits (1547), Expect = e-169
 Identities = 286/399 (71%), Positives = 334/399 (83%)
 Frame = -1

Query: 1411 ASAAVKFFRWAGSLSKHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQEGMLSMATFASVF 1232
            A++A+ FFRWAG   K T Y+WNLMVDLLGKN ++E MWDA+R+MKQE MLSMATF SVF
Sbjct: 72   ATSAIAFFRWAGRTHKLTSYAWNLMVDLLGKNWMYEPMWDAVRTMKQEDMLSMATFVSVF 131

Query: 1231 GSYCIAGKFTEAIMTFDVMDRYGMQQDVVAVNSLLSAICREENMTSKAVEFFERVKMKVA 1052
            GSYC+AGKF EAIM+F VMD+YG+QQDVV VNSLL+AIC EEN T+KA+EFF+++K+K+ 
Sbjct: 132  GSYCMAGKFNEAIMSFYVMDKYGVQQDVVVVNSLLTAICHEENQTAKALEFFDKIKLKIP 191

Query: 1051 PDGDTFAILLEGWEKEGNATKAKNTFGEMVIRVGWSPENMSAYDAFLTTLVRGSQADEAI 872
            P+ DTFAILLEGWEKEG+  KAK TFGEMVI+VGWSPENMSAYD+FLTTLVRGSQADEA+
Sbjct: 192  PNADTFAILLEGWEKEGDVAKAKTTFGEMVIKVGWSPENMSAYDSFLTTLVRGSQADEAV 251

Query: 871  KFLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAAPLWEIMVGSGLVPNLIMYNAMIGLL 692
            KFL VMKGKNCLPG+KFFSNALD+LVKQNDS+ A PLW+IMVGSGL+PNLIMYNAMIGL 
Sbjct: 252  KFLRVMKGKNCLPGLKFFSNALDMLVKQNDSTHAIPLWDIMVGSGLLPNLIMYNAMIGLH 311

Query: 691  CNNNDFDNALRFFDEMVFHGAFPDSLTYNMIFQCLIKNKKIREATSFFKEMMKNEEPPTH 512
            CNNND DNA R  DEMVF+GAFPD LT+N+IF+CLIKNKK+     FF EM+KNE PPTH
Sbjct: 312  CNNNDVDNAFRLLDEMVFNGAFPDFLTFNIIFRCLIKNKKVHRVGKFFYEMIKNESPPTH 371

Query: 511  ANCAAAIKMFFDADDPETAIEVWTSMMKNRVLPVDESSNELLIGLCGLNRMSDVRRFFDD 332
             +C+AAI    D  DPE AIE+W  +++N VLP+D S+N LLIG C L RMS VRRF +D
Sbjct: 372  FDCSAAIMTLIDGGDPEMAIEIWNYIVENHVLPLDGSANALLIGFCNLGRMSQVRRFAED 431

Query: 331  MLDLRIDIYESTMNKLKLAFYKKGRSGEDIYKHLSRKWK 215
            MLD RI+IYESTM KLK +F K GR G D Y  L R+WK
Sbjct: 432  MLDRRINIYESTMKKLKDSFDKTGRHGRDKYDCLIRRWK 470


>ref|XP_002519926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540972|gb|EEF42530.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 481

 Score =  595 bits (1534), Expect = e-168
 Identities = 281/402 (69%), Positives = 334/402 (83%)
 Frame = -1

Query: 1420 YGYASAAVKFFRWAGSLSKHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQEGMLSMATFA 1241
            Y   ++AV+FFRWAG    HT YSWNLMVDLLGKN LFE MWDAIRSMKQE +LSMATFA
Sbjct: 78   YSNPASAVEFFRWAGRSGTHTPYSWNLMVDLLGKNQLFEAMWDAIRSMKQENVLSMATFA 137

Query: 1240 SVFGSYCIAGKFTEAIMTFDVMDRYGMQQDVVAVNSLLSAICREENMTSKAVEFFERVKM 1061
            SVFGSYC AG F+EAIM+FD+MD+YG+QQDV+AVNSLLSAIC E+N T KAVEFF+R+K+
Sbjct: 138  SVFGSYCKAGSFSEAIMSFDIMDKYGIQQDVIAVNSLLSAICNEDNQTIKAVEFFDRIKL 197

Query: 1060 KVAPDGDTFAILLEGWEKEGNATKAKNTFGEMVIRVGWSPENMSAYDAFLTTLVRGSQAD 881
            K+ PDGDT+AILLEGWEKEGNA KAKN FGEMVI VGWSPENM AY+AFL  LVR SQ D
Sbjct: 198  KIPPDGDTYAILLEGWEKEGNAAKAKNIFGEMVIHVGWSPENMPAYNAFLNLLVRESQTD 257

Query: 880  EAIKFLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAAPLWEIMVGSGLVPNLIMYNAMI 701
            +A  FL +MK K CLPG+KF+S+ALD+L+K+ND   A P+W+IMV +GL+PNL+MYN+MI
Sbjct: 258  DAFDFLRLMKEKGCLPGLKFYSDALDMLLKRNDVLHAVPMWDIMVDTGLMPNLLMYNSMI 317

Query: 700  GLLCNNNDFDNALRFFDEMVFHGAFPDSLTYNMIFQCLIKNKKIREATSFFKEMMKNEEP 521
            GLLCNNND DNA R FD+MVFHGAFPD LTY MIF+CL+KNKK+ +A SFF EM+KNE P
Sbjct: 318  GLLCNNNDIDNAFRLFDDMVFHGAFPDFLTYKMIFRCLVKNKKVSQAASFFHEMIKNENP 377

Query: 520  PTHANCAAAIKMFFDADDPETAIEVWTSMMKNRVLPVDESSNELLIGLCGLNRMSDVRRF 341
            PTH +CAAAI MF   DDPE AIE+W  M+ ++ LP+DES+N LL+GL  L R+S+V RF
Sbjct: 378  PTHLDCAAAITMFMGGDDPEMAIEIWNYMVDDQELPLDESANALLVGLGNLGRLSEVSRF 437

Query: 340  FDDMLDLRIDIYESTMNKLKLAFYKKGRSGEDIYKHLSRKWK 215
             +DMLD RI+I+ESTM KLK +FYK+GRS  D +  LSRKWK
Sbjct: 438  AEDMLDRRINIHESTMAKLKASFYKEGRSSRDRFDSLSRKWK 479


>ref|XP_003548696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Glycine max]
          Length = 488

 Score =  570 bits (1468), Expect = e-160
 Identities = 269/404 (66%), Positives = 324/404 (80%)
 Frame = -1

Query: 1420 YGYASAAVKFFRWAGSLSKHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQEGMLSMATFA 1241
            Y Y S+AVKFFRWAG   KH  ++WNLMVDLLGKN LFE MWDA+RSMKQE  LS++TFA
Sbjct: 82   YNYPSSAVKFFRWAGRGKKHPVHTWNLMVDLLGKNQLFEPMWDAVRSMKQEQKLSLSTFA 141

Query: 1240 SVFGSYCIAGKFTEAIMTFDVMDRYGMQQDVVAVNSLLSAICREENMTSKAVEFFERVKM 1061
            SVF SYC A +F EA+M+FDVMDRYG++QDVVAVNSLLSAIC E+N TS  +EFFE +K 
Sbjct: 142  SVFQSYCTAARFNEAVMSFDVMDRYGVKQDVVAVNSLLSAICSEDNQTSFGLEFFEGIKA 201

Query: 1060 KVAPDGDTFAILLEGWEKEGNATKAKNTFGEMVIRVGWSPENMSAYDAFLTTLVRGSQAD 881
            KV PDGDTFAILLEGWEKEGNA KAK TFG+MV  +GW+ +N++AYDAFL TL+R    D
Sbjct: 202  KVPPDGDTFAILLEGWEKEGNAAKAKTTFGDMVAHIGWNKDNVAAYDAFLMTLLRAGLMD 261

Query: 880  EAIKFLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAAPLWEIMVGSGLVPNLIMYNAMI 701
            + ++FL VMK  +C PG+KFF+ ALD LVKQND+  A P+W++MV   LVPNLIMYNAMI
Sbjct: 262  DVVRFLQVMKDHDCFPGLKFFTTALDFLVKQNDADHAVPVWDVMVSGELVPNLIMYNAMI 321

Query: 700  GLLCNNNDFDNALRFFDEMVFHGAFPDSLTYNMIFQCLIKNKKIREATSFFKEMMKNEEP 521
            GLLCNN   D+A R  DEM FHGAFPDSLTYNMIF+CL+KNKK RE   FF EM+KNE P
Sbjct: 322  GLLCNNAAVDHAFRLLDEMAFHGAFPDSLTYNMIFECLVKNKKARETERFFAEMVKNEWP 381

Query: 520  PTHANCAAAIKMFFDADDPETAIEVWTSMMKNRVLPVDESSNELLIGLCGLNRMSDVRRF 341
            PT +NCAAAI M FD DDPE A E+W+ +++NRV P+DES+N LLIGLC ++R ++V+RF
Sbjct: 382  PTGSNCAAAIAMLFDCDDPEAAHEIWSYVVENRVKPLDESANALLIGLCNMSRFTEVKRF 441

Query: 340  FDDMLDLRIDIYESTMNKLKLAFYKKGRSGEDIYKHLSRKWKGH 209
             +D+LD RI+IY+STM+ LK AFYK+GRS  D Y  L R+WK H
Sbjct: 442  AEDILDRRINIYQSTMSILKDAFYKEGRSARDRYDSLYRRWKAH 485


>ref|XP_003629008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355523030|gb|AET03484.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  554 bits (1427), Expect = e-155
 Identities = 265/411 (64%), Positives = 331/411 (80%), Gaps = 7/411 (1%)
 Frame = -1

Query: 1420 YGYASAAVKFFRWAGSLSKHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQEGMLSMATFA 1241
            Y Y S+A+KFFRWAG L KH+ ++WNLMVDLLG+N LFE MWDA+R+MKQEG+LS+ TF 
Sbjct: 93   YNYPSSAIKFFRWAGRLRKHSAHAWNLMVDLLGRNQLFEPMWDAVRTMKQEGVLSLPTFV 152

Query: 1240 SVFGSYCIAGKFTEAIMTFDVMDRYGMQQDVVAVNSLLSAICREENMTSKAVEFFERV-- 1067
            SVF SYC+AG+  EA+M+FDVMD+Y + ++VVAVNSLLSAICREEN TS  VEF E+   
Sbjct: 153  SVFQSYCMAGRVNEAVMSFDVMDKYDIDKNVVAVNSLLSAICREENQTSVGVEFLEKKVT 212

Query: 1066 ---KMKVAPDGDTFAILLEGWEKEGNATKAKNTFGEMVIRVGWSPENMSAYDAFLTTLVR 896
               + K+  DGD++AILLEGWEKEGNATKAK TFGEMVIRVGWS +N++AYDAFL TL+R
Sbjct: 213  GKDEGKIELDGDSYAILLEGWEKEGNATKAKTTFGEMVIRVGWSQDNVAAYDAFLMTLLR 272

Query: 895  GSQADEAIKFLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAAPLWEIMVGSGLVPNLIM 716
              Q DE + FL VMK  +C PG+KFF+NALD+LVK+ND++ A PLW++MV SGL+PNLIM
Sbjct: 273  ALQFDEVVGFLKVMKDHDCFPGLKFFTNALDVLVKRNDAAHAIPLWDVMVVSGLLPNLIM 332

Query: 715  YNAMIGLLCNNNDFDNALRFFDEMVFHGAFPDSLTYNMIFQCLIKNKKIREATSFFKEMM 536
            YNAMIGLLCNN++ D+A R  DEMV HGAFPDSLTYNMIF+CL+KNKK+RE   FF EM+
Sbjct: 333  YNAMIGLLCNNDEIDHAFRLLDEMVLHGAFPDSLTYNMIFECLVKNKKVRETERFFAEMI 392

Query: 535  KNEEPPTHANCAAAIKMFFDADDPETAIEVWTSMMKNRVLPVDESSNELLIGLCGLNRMS 356
            KNE  PT +NCA AI+M F+ DDP+ A+E+W+ M++ RV  +D S+N +LIGLC L R+S
Sbjct: 393  KNEWLPTTSNCAVAIEMLFNCDDPDAALEIWSYMVETRVRVLDVSANMVLIGLCKLKRLS 452

Query: 355  DVRRFFDDMLDLRIDIYESTMNKLKLAFYKKGR--SGEDIYKHLSRKWKGH 209
            +VRRF ++MLD RI IY+STMNKLK AFYK+ R  S  D +  + R+WK H
Sbjct: 453  EVRRFAEEMLDKRISIYDSTMNKLKEAFYKESRSSSARDKFDAIYRRWKAH 503


>ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
            gi|296085476|emb|CBI29208.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  553 bits (1425), Expect = e-155
 Identities = 263/402 (65%), Positives = 320/402 (79%)
 Frame = -1

Query: 1420 YGYASAAVKFFRWAGSLSKHTQYSWNLMVDLLGKNGLFETMWDAIRSMKQEGMLSMATFA 1241
            Y  +SAAV+FFRWAG   KH+ +SWNL+VDLLGKN  FE MWDAIRSM+ EG LS++ F 
Sbjct: 56   YSNSSAAVEFFRWAGLTRKHSAHSWNLIVDLLGKNSKFEPMWDAIRSMRNEGALSLSAFI 115

Query: 1240 SVFGSYCIAGKFTEAIMTFDVMDRYGMQQDVVAVNSLLSAICREENMTSKAVEFFERVKM 1061
            SVFGSYC  G+  EAIM+F+VMDRYG+  DV A+N+LLSAIC E   T+ A+EFFE++K+
Sbjct: 116  SVFGSYCSVGRVNEAIMSFEVMDRYGIPPDVAAMNALLSAICCEGGSTTLALEFFEKIKV 175

Query: 1060 KVAPDGDTFAILLEGWEKEGNATKAKNTFGEMVIRVGWSPENMSAYDAFLTTLVRGSQAD 881
            K+ PDGDTF ILLEGWE+EGN TKAK+TFGEMV+R+GWSP+NM AY++ L TLVRG + +
Sbjct: 176  KITPDGDTFMILLEGWEREGNVTKAKSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVE 235

Query: 880  EAIKFLHVMKGKNCLPGMKFFSNALDILVKQNDSSQAAPLWEIMVGSGLVPNLIMYNAMI 701
            EAIKFL VMKGK CLPG+KFFSNALD+L+KQNDS+ A  LW+IM+  G +PNL+MYN +I
Sbjct: 236  EAIKFLLVMKGKGCLPGLKFFSNALDVLLKQNDSTHAIALWDIMLDGGFMPNLMMYNTII 295

Query: 700  GLLCNNNDFDNALRFFDEMVFHGAFPDSLTYNMIFQCLIKNKKIREATSFFKEMMKNEEP 521
            G+LCN  D DNA RF DEMVF+G F DS TYNMIFQCL+K+KK+ EA  FF EM+KNE P
Sbjct: 296  GILCNAGDADNAFRFLDEMVFYGVFADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECP 355

Query: 520  PTHANCAAAIKMFFDADDPETAIEVWTSMMKNRVLPVDESSNELLIGLCGLNRMSDVRRF 341
            P  +NCAAAI M FD DDPE AIE+W+ M++N + PVDES+N LLIGLC L R SD RRF
Sbjct: 356  PMPSNCAAAIAMCFDGDDPEMAIEIWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRF 415

Query: 340  FDDMLDLRIDIYESTMNKLKLAFYKKGRSGEDIYKHLSRKWK 215
             +DMLD++I I+ESTM KLK A YK GRS  D    L ++WK
Sbjct: 416  AEDMLDMKIKIHESTMEKLKNARYKDGRSARDTCDSLWKRWK 457