BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009384
         (1632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512770.1| uv excision repair protein rad23, putative [...   507   e-141
ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|2...   495   e-137
ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23...   490   e-136
ref|XP_003543714.1| PREDICTED: putative DNA repair protein RAD23...   487   e-135
gb|ABK95041.1| unknown [Populus trichocarpa]                          486   e-135

>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
            gi|223547781|gb|EEF49273.1| uv excision repair protein
            rad23, putative [Ricinus communis]
          Length = 359

 Score =  507 bits (1306), Expect = e-141
 Identities = 274/387 (70%), Positives = 293/387 (75%), Gaps = 7/387 (1%)
 Frame = -2

Query: 1430 MKLTVKTLKGSHFEIRVQPGDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLE 1251
            MKLTVKTLKGSHFEIRVQP DTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 1250 ENKVSEDGFLVVMLSKKTVXXXXXXXXXXXXXXXXXXXXXTPGXXXXXXXXXXXXXXXXX 1071
            +NKV+EDGFLVVMLSK                          G                 
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSGSS-------------------GTSSTQPAAATPPTTAPS 101

Query: 1070 XXXXXXTDVPP----DAYGQAASNLVAGNNTEQIIQQLMDMGGGNWDKETVTRALRAAYN 903
                   +V P    D YG+AASNLVAG+N EQ IQQ+MDMGGG WDKETVTRALRAAYN
Sbjct: 102  SNSTPAVEVQPPTQTDTYGEAASNLVAGDNLEQTIQQIMDMGGGTWDKETVTRALRAAYN 161

Query: 902  NPERAVDYLYSGIPEATEAAVPVPNFPLNQESGGADLTTETGLAGAAPPSGVPNSSPLNM 723
            NPERAVDYLYSGIPE  E AVPV + P  Q        TETG A AAP SGVPNSSPLNM
Sbjct: 162  NPERAVDYLYSGIPETAEVAVPVAHLPAGQ-------ATETGAAPAAPLSGVPNSSPLNM 214

Query: 722  FPQEALNA---GAGGGDGSLDFLRNNLQFQTLRSMVQANPQILQPMLQELSKQNPQLLRL 552
            FPQEAL+A   G+ GG GSLDFLRNN QFQTLRSMVQANPQILQPMLQEL KQNPQLLR+
Sbjct: 215  FPQEALSAAGGGSAGGLGSLDFLRNNAQFQTLRSMVQANPQILQPMLQELGKQNPQLLRM 274

Query: 551  IQEHHAEFLQLINEPVEGAEGDLFEQPEQDEDMPHAISVTPAEQEIIERLEAMGFDRALV 372
            IQEHHAEFLQL+NEP+EG+EGD+F+Q EQ  DMPHAI+VTPAEQ  IERL AMGFDRALV
Sbjct: 275  IQEHHAEFLQLLNEPLEGSEGDIFDQGEQ--DMPHAINVTPAEQAAIERLVAMGFDRALV 332

Query: 371  LEAFLACDRNEELAANYLLENAGDYED 291
            +EAFLACDRNE LAANYLLEN GD+ED
Sbjct: 333  IEAFLACDRNEVLAANYLLENGGDFED 359


>ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|222841402|gb|EEE78949.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  495 bits (1275), Expect = e-137
 Identities = 265/384 (69%), Positives = 285/384 (74%), Gaps = 4/384 (1%)
 Frame = -2

Query: 1430 MKLTVKTLKGSHFEIRVQPGDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLE 1251
            MKLTVKTLKGSHFEI+V P DT+M VKKNIED QGKDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1    MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 1250 ENKVSEDGFLVVMLSKKTVXXXXXXXXXXXXXXXXXXXXXTPGXXXXXXXXXXXXXXXXX 1071
            +NKV+EDGFLVVMLSK                                            
Sbjct: 61   DNKVTEDGFLVVMLSKSKTGTAGTSSTQPVSTPPTTTPTSISTPAPDAQAF--------- 111

Query: 1070 XXXXXXTDVPPDAYGQAASNLVAGNNTEQIIQQLMDMGGGNWDKETVTRALRAAYNNPER 891
                       D YGQAASNLVAG+N EQ +QQ+MDMGGG WDKETVTRALRAAYNNPER
Sbjct: 112  --------AQSDTYGQAASNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPER 163

Query: 890  AVDYLYSGIPEATEAAVPVPNFPLNQESGGADLTTETGLAGAAPPS--GVPNSSPLNMFP 717
            AVDYLYSGIPE  E AVPV  FP       AD  TETG A AAP    G PNSSPLNMFP
Sbjct: 164  AVDYLYSGIPETAEVAVPVARFP-------ADQATETGAAPAAPAPAFGAPNSSPLNMFP 216

Query: 716  QEALNAG--AGGGDGSLDFLRNNLQFQTLRSMVQANPQILQPMLQELSKQNPQLLRLIQE 543
            +     G  AGGG GSLDFLRNN QFQ LRSMVQANPQILQPMLQEL KQNPQLLR+IQE
Sbjct: 217  ETISGGGGGAGGGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRIIQE 276

Query: 542  HHAEFLQLINEPVEGAEGDLFEQPEQDEDMPHAISVTPAEQEIIERLEAMGFDRALVLEA 363
            HHAEFLQLINEP++G+EGD+F+QP  D+DMPHAI+VTPAEQE IERLEAMGFDRALV+EA
Sbjct: 277  HHAEFLQLINEPLDGSEGDIFDQP--DQDMPHAINVTPAEQEAIERLEAMGFDRALVIEA 334

Query: 362  FLACDRNEELAANYLLENAGDYED 291
            FLACDRNE+LAANYLLENAGD+ED
Sbjct: 335  FLACDRNEQLAANYLLENAGDFED 358


>ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis sativus]
          Length = 358

 Score =  490 bits (1262), Expect = e-136
 Identities = 264/383 (68%), Positives = 285/383 (74%), Gaps = 3/383 (0%)
 Frame = -2

Query: 1430 MKLTVKTLKGSHFEIRVQPGDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLE 1251
            MKLTVKTLKGSHFEIRVQ  DTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 1250 ENKVSEDGFLVVMLSKKTVXXXXXXXXXXXXXXXXXXXXXTPGXXXXXXXXXXXXXXXXX 1071
            ENKVSE+GFLVVMLSK                                            
Sbjct: 61   ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTP--------- 111

Query: 1070 XXXXXXTDVPPDAYGQAASNLVAGNNTEQIIQQLMDMGGGNWDKETVTRALRAAYNNPER 891
                    V  D YGQAASNLVAGNN EQ +QQLMDMGGGNWD+ETV RALRAAYNNPER
Sbjct: 112  -------SVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPER 164

Query: 890  AVDYLYSGIPEATEAAVPVPNFPLNQESGGADLTTETGLAGAAPPSGVPNSSPLNMFPQE 711
            AVDYLYSGIPE+ E AVPV  F       G+   TET  +  AP SG PN++PLNMFPQE
Sbjct: 165  AVDYLYSGIPESAEVAVPVGRF-------GSGQATETDASVPAPVSGAPNTAPLNMFPQE 217

Query: 710  ALNAGAGGGD---GSLDFLRNNLQFQTLRSMVQANPQILQPMLQELSKQNPQLLRLIQEH 540
            AL+AG+GGG    GSL+FLRNN QFQ LR+MV  NPQILQPMLQEL KQNPQLLRLIQ+H
Sbjct: 218  ALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDH 277

Query: 539  HAEFLQLINEPVEGAEGDLFEQPEQDEDMPHAISVTPAEQEIIERLEAMGFDRALVLEAF 360
            HAEFLQLINEPV+  EG++FEQ E   DMPHAI+VTPAEQ  IERLEAMGFDRALV+EAF
Sbjct: 278  HAEFLQLINEPVDNFEGEMFEQAE--PDMPHAINVTPAEQAAIERLEAMGFDRALVIEAF 335

Query: 359  LACDRNEELAANYLLENAGDYED 291
            LACDRNEELAANYLLEN+GD++D
Sbjct: 336  LACDRNEELAANYLLENSGDFDD 358


>ref|XP_003543714.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform 2
            [Glycine max]
          Length = 353

 Score =  487 bits (1254), Expect = e-135
 Identities = 262/379 (69%), Positives = 286/379 (75%)
 Frame = -2

Query: 1430 MKLTVKTLKGSHFEIRVQPGDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLE 1251
            MKLTVKTLKGSHFEIRVQP DT+MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLS 60

Query: 1250 ENKVSEDGFLVVMLSKKTVXXXXXXXXXXXXXXXXXXXXXTPGXXXXXXXXXXXXXXXXX 1071
            +NKVSEDGFLVVMLSK                        TP                  
Sbjct: 61   DNKVSEDGFLVVMLSKGKTLGSAGISSTQACCFNPPTTVSTPNSTPLVQPH--------- 111

Query: 1070 XXXXXXTDVPPDAYGQAASNLVAGNNTEQIIQQLMDMGGGNWDKETVTRALRAAYNNPER 891
                    V  + YGQAASNLVAG+N EQ IQQLMDMGGG+WD++TVT ALRAAYNNPER
Sbjct: 112  --------VTTNTYGQAASNLVAGSNLEQTIQQLMDMGGGSWDRDTVTCALRAAYNNPER 163

Query: 890  AVDYLYSGIPEATEAAVPVPNFPLNQESGGADLTTETGLAGAAPPSGVPNSSPLNMFPQE 711
            AVDYLYSGIP A E AVP  ++P++Q       TTETG A      GVPNSSPLNMFPQE
Sbjct: 164  AVDYLYSGIPVAAEIAVPAASYPISQ-------TTETGGASVGAVPGVPNSSPLNMFPQE 216

Query: 710  ALNAGAGGGDGSLDFLRNNLQFQTLRSMVQANPQILQPMLQELSKQNPQLLRLIQEHHAE 531
             ++ GAG   GSLDFLRNN QFQ LRSMVQ+NPQILQP+LQEL KQNP LL LIQEHHAE
Sbjct: 217  TIS-GAGAEIGSLDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPSLLTLIQEHHAE 275

Query: 530  FLQLINEPVEGAEGDLFEQPEQDEDMPHAISVTPAEQEIIERLEAMGFDRALVLEAFLAC 351
            FLQLINEPVEG+EGD+F+QPEQ  DMPHAI+VTPAEQE I RLEAMGFDRA V+EAFLAC
Sbjct: 276  FLQLINEPVEGSEGDIFDQPEQ--DMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLAC 333

Query: 350  DRNEELAANYLLENAGDYE 294
            D +E+LAANYLLENAGD+E
Sbjct: 334  DHDEQLAANYLLENAGDFE 352


>gb|ABK95041.1| unknown [Populus trichocarpa]
          Length = 375

 Score =  486 bits (1250), Expect = e-135
 Identities = 263/387 (67%), Positives = 284/387 (73%), Gaps = 7/387 (1%)
 Frame = -2

Query: 1430 MKLTVKTLKGSHFEIRVQPGDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLE 1251
            MKLTVKTLKGSHFEI+VQP DTVM VKKNIEDVQGKDNYPCGQQLLIHNGKVLKDE+TL 
Sbjct: 1    MKLTVKTLKGSHFEIKVQPTDTVMGVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 1250 ENKVSEDGFLVVMLSKKTVXXXXXXXXXXXXXXXXXXXXXTPGXXXXXXXXXXXXXXXXX 1071
            +NKV+EDGFLVVMLSK                                            
Sbjct: 61   DNKVTEDGFLVVMLSKSKTAAAGTSSTQPVSTPPTTTPTSNSTPDAPAPDAQAPASKSAS 120

Query: 1070 XXXXXXTDVPPDAYGQAASNLVAGNNTEQIIQQLMDMGGGNWDKETVTRALRAAYNNPER 891
                   +   D YGQAASNLVAG++ EQ IQQ+MD+GGGNWDKETVTRALRAAYNNPER
Sbjct: 121  ASDTATANAQSDTYGQAASNLVAGSSLEQTIQQIMDVGGGNWDKETVTRALRAAYNNPER 180

Query: 890  AVDYLYSGIPEATEAAVPVPNFPLNQESGGADLTTETGLAGAAPP--SGVPNSSPLNMFP 717
            AVDYLYSGIPE  E AVPV  FP       AD   ETG A AAP    G PNSSPLNMFP
Sbjct: 181  AVDYLYSGIPETAEVAVPVARFP-------ADQGIETGAAPAAPALAPGGPNSSPLNMFP 233

Query: 716  QEALNAGAGGGD-----GSLDFLRNNLQFQTLRSMVQANPQILQPMLQELSKQNPQLLRL 552
            +       GGGD     GSLDFLRNN QFQ LRSMVQANPQILQPMLQEL KQNPQLLR+
Sbjct: 234  E---TLSGGGGDAGLVLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRM 290

Query: 551  IQEHHAEFLQLINEPVEGAEGDLFEQPEQDEDMPHAISVTPAEQEIIERLEAMGFDRALV 372
            IQEH+AEFLQLINEP++G+EGD+F+QP  D+DMPHAI+VTPAEQE IERL AMGFDRALV
Sbjct: 291  IQEHNAEFLQLINEPLDGSEGDIFDQP--DQDMPHAINVTPAEQEAIERLVAMGFDRALV 348

Query: 371  LEAFLACDRNEELAANYLLENAGDYED 291
            +EAFLACDRNEELAANYLLEN  D+ED
Sbjct: 349  IEAFLACDRNEELAANYLLENGADFED 375