BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009372
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulf...   344   2e-92
emb|CAA29590.1| Rieske FeS-precursor [Spinacia oleracea] gi|2261...   343   4e-92
sp|P08980.2|UCRIA_SPIOL RecName: Full=Cytochrome b6-f complex ir...   339   6e-91
sp|P26291.1|UCRIA_PEA RecName: Full=Cytochrome b6-f complex iron...   338   1e-90
gb|ACU14088.1| unknown [Glycine max]                                  335   1e-89

>ref|XP_002284361.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|147826727|emb|CAN66108.1| hypothetical protein
           VITISV_020089 [Vitis vinifera]
           gi|302143099|emb|CBI20394.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  344 bits (882), Expect = 2e-92
 Identities = 167/229 (72%), Positives = 183/229 (79%), Gaps = 1/229 (0%)
 Frame = +3

Query: 141 MATTTFSPSTPSQLCSSKNGMFSPSQALALKSTKTQ-FIGKENKGVKITCQASSIPADRV 317
           MA +T SP+T SQLCS +NG+ SPS AL  K T+T  F+GK  KG+KI CQA+SIPADRV
Sbjct: 1   MAASTLSPATSSQLCSIRNGVLSPSHALLPKLTRTSPFVGK-GKGLKIKCQATSIPADRV 59

Query: 318 PDMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXXXXKDALGNDVIASEWL 497
           PDM KR+            P+AGML+PYA FF              KDALGNDVIA EWL
Sbjct: 60  PDMGKRKLMNLLLLGAISLPSAGMLIPYATFFAPPGTGSAGGGIVAKDALGNDVIADEWL 119

Query: 498 KTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHG 677
           KTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVP+N AENKFICPCHG
Sbjct: 120 KTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHG 179

Query: 678 SQYNNQGTVVRGPAPLSLALAHADIDDGKVIFVPWTETDFRTGQEPWWS 824
           SQYNNQG VVRGPAPLSLALAHADIDDGKV+FVPW ETDFRTG++PWW+
Sbjct: 180 SQYNNQGRVVRGPAPLSLALAHADIDDGKVLFVPWVETDFRTGEDPWWA 228


>emb|CAA29590.1| Rieske FeS-precursor [Spinacia oleracea] gi|226151|prf||1412276A
           rieske FeS precursor protein
          Length = 247

 Score =  343 bits (880), Expect = 4e-92
 Identities = 171/251 (68%), Positives = 188/251 (74%), Gaps = 1/251 (0%)
 Frame = +3

Query: 75  SLLFSLHLSQKSISNSSWVLSAMATTTFSPSTPSQLCSSKNGMFSPSQALALKSTKTQFI 254
           S+   LHL++ S        S MA+ T S +TPSQLCSSKNGMF+PS ALA        I
Sbjct: 4   SIFNQLHLTENS--------SLMASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLI 55

Query: 255 GKEN-KGVKITCQASSIPADRVPDMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXX 431
            KE  +G+K+TCQA+SIPAD VPDM KRET           PT  ML+PYA FF      
Sbjct: 56  SKERIRGMKLTCQATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGG 115

Query: 432 XXXXXXXXKDALGNDVIASEWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVC 611
                   KDALGNDVIA+EWLKTH PGDRTLTQGLKGDPTYLVVE+DKTLAT+GINAVC
Sbjct: 116 AGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVC 175

Query: 612 THLGCVVPFNKAENKFICPCHGSQYNNQGTVVRGPAPLSLALAHADIDDGKVIFVPWTET 791
           THLGCVVPFN AENKFICPCHGSQYNNQG VVRGPAPLSLALAH D+DDGKV+FVPWTET
Sbjct: 176 THLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTET 235

Query: 792 DFRTGQEPWWS 824
           DFRTG+ PWWS
Sbjct: 236 DFRTGEAPWWS 246


>sp|P08980.2|UCRIA_SPIOL RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
          Length = 230

 Score =  339 bits (870), Expect = 6e-91
 Identities = 165/229 (72%), Positives = 179/229 (78%), Gaps = 1/229 (0%)
 Frame = +3

Query: 141 MATTTFSPSTPSQLCSSKNGMFSPSQALALKSTKTQFIGKEN-KGVKITCQASSIPADRV 317
           MA+ T S +TPSQLCSSKNGMF+PS ALA        I KE  +G+K+TCQA+SIPAD V
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 318 PDMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXXXXKDALGNDVIASEWL 497
           PDM KRET           PT  ML+PYA FF              KDALGNDVIA+EWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 498 KTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHG 677
           KTH PGDRTLTQGLKGDPTYLVVE+DKTLAT+GINAVCTHLGCVVPFN AENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 678 SQYNNQGTVVRGPAPLSLALAHADIDDGKVIFVPWTETDFRTGQEPWWS 824
           SQYNNQG VVRGPAPLSLALAH D+DDGKV+FVPWTETDFRTG+ PWWS
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229


>sp|P26291.1|UCRIA_PEA RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
           gi|20832|emb|CAA45151.1| chloroplast Rieske FeS protein
           [Pisum sativum]
          Length = 230

 Score =  338 bits (867), Expect = 1e-90
 Identities = 161/230 (70%), Positives = 182/230 (79%), Gaps = 2/230 (0%)
 Frame = +3

Query: 141 MATTTFSPSTPSQLCSSKNGMFSPSQALALKSTKTQFIGKENKGVKITCQASSIPADRVP 320
           M++TT SP+TPSQLCS K+G+  PS AL +K T+TQ  G+ NKG+KITCQA+SIPADRVP
Sbjct: 1   MSSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVP 60

Query: 321 DMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXXXXKDALGNDVIASEWLK 500
           DMSKR+T           PTAGMLVPY  F               KDA+GNDV+A+EWLK
Sbjct: 61  DMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLK 120

Query: 501 THGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 680
           TH PGDRTLTQGLKGDPTYLVVE D+TLAT+ INAVCTHLGCVVPFN+AENKFICPCHGS
Sbjct: 121 THAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGS 180

Query: 681 QYNNQGTVVRGPAPLSLALAHAD--IDDGKVIFVPWTETDFRTGQEPWWS 824
           QYN+QG VVRGPAPLSLALAH D  ++DGKV+FVPW ETDFRTG  PWWS
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230


>gb|ACU14088.1| unknown [Glycine max]
          Length = 227

 Score =  335 bits (859), Expect = 1e-89
 Identities = 158/228 (69%), Positives = 178/228 (78%)
 Frame = +3

Query: 141 MATTTFSPSTPSQLCSSKNGMFSPSQALALKSTKTQFIGKENKGVKITCQASSIPADRVP 320
           MA+TT SP+TPSQLCS K+G+FSPSQAL +K  K Q +GK +KG++I CQA+SIPADRVP
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGK-SKGMRIACQATSIPADRVP 59

Query: 321 DMSKRETXXXXXXXXXXXPTAGMLVPYAVFFXXXXXXXXXXXXXXKDALGNDVIASEWLK 500
           DM KR+            P+AGML+PY  FF              KDA+GNDVIA  WLK
Sbjct: 60  DMGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLK 119

Query: 501 THGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPFNKAENKFICPCHGS 680
            HGPGDRTL QGLKGDPTYLVVE D+TLATY INAVCTHLGCVVP+N+AENKFICPCHGS
Sbjct: 120 AHGPGDRTLAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPCHGS 179

Query: 681 QYNNQGTVVRGPAPLSLALAHADIDDGKVIFVPWTETDFRTGQEPWWS 824
           QYN+QG V RGPAPLSLALAH DIDDGKV+FVPW ETDFRTG  PWW+
Sbjct: 180 QYNDQGRVARGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227