BLASTX nr result

ID: Cimicifuga21_contig00009366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009366
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135931.1| PREDICTED: cellulose synthase A catalytic su...   417   e-114
gb|AAQ63936.1| cellulose synthase [Pinus radiata]                     415   e-114
ref|XP_002298432.1| cellulose synthase [Populus trichocarpa] gi|...   414   e-113
gb|AFZ78554.1| cellulose synthase [Populus tomentosa]                 414   e-113
gb|AFZ78557.1| cellulose synthase [Populus tomentosa]                 413   e-113

>ref|XP_004135931.1| PREDICTED: cellulose synthase A catalytic subunit 3
            [UDP-forming]-like [Cucumis sativus]
          Length = 1083

 Score =  417 bits (1073), Expect = e-114
 Identities = 199/311 (63%), Positives = 241/311 (77%), Gaps = 1/311 (0%)
 Frame = +3

Query: 3    IGWIYGSQISNILAGFKMHSRGWRSVYCMPARSAFRGSAPINLSGSLSQVFQLAFDSVEI 182
            IGWIYGS   +IL GFKMH+RGWRS+YCMP R AF+GSAPINLS  L+QV + A  SVEI
Sbjct: 773  IGWIYGSVTEDILTGFKMHARGWRSIYCMPQRPAFKGSAPINLSDRLNQVLRWALGSVEI 832

Query: 183  LLSSHCPIWYGYGGQLKWLGRVAYINATICPLTSIPLFIYCTLPAILLLTRKFIIPMVSK 362
            LLS HCPIWYGYGG+LKWL R AY+N TI P+TSIPL +YCTLPA+ LLT KFIIP +S 
Sbjct: 833  LLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLMYCTLPAVCLLTNKFIIPQISN 892

Query: 363  QASMLLILLFVSNFSNVILESRWSGVGIQEWWRNQQFWVIAGVSSHLFAVFQGLIKTLTG 542
             AS+  + LF+S F+  ILE RWSGVGI EWWRN+QFWVI GVS+HLFAVFQGL+K L G
Sbjct: 893  IASIWFLALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAG 952

Query: 543  SKTGSSEIAKKS-YNGNTAEQYRFKVTSLFVFPTTLILINLWAMFAGIFSAASSGYWSWV 719
              T  +  +K S  +G+ AE Y FK T+L + PTTL+++NL  + AGI  A +SGY SW 
Sbjct: 953  IDTNFTVTSKASDEDGDYAELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWG 1012

Query: 720  LLFYRLLFAFCVVVHLHPFLKGLFARKNRIPTVVVVWSLLLATLFSLFWVRVSPFTTTFR 899
             LF +L FAF V++HL+PFLKGL  R+NR PT+VVVWS+LLA++FSL WVR+ PFTTT  
Sbjct: 1013 PLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTTVI 1072

Query: 900  GPDSKECGVQC 932
            GPD +ECG+ C
Sbjct: 1073 GPDVEECGINC 1083


>gb|AAQ63936.1| cellulose synthase [Pinus radiata]
          Length = 1066

 Score =  415 bits (1067), Expect = e-114
 Identities = 199/311 (63%), Positives = 241/311 (77%), Gaps = 1/311 (0%)
 Frame = +3

Query: 3    IGWIYGSQISNILAGFKMHSRGWRSVYCMPARSAFRGSAPINLSGSLSQVFQLAFDSVEI 182
            IGWIYGS   +IL GFKMH+RGWRS+YCMP R AF+GSAPINLS  L+QV + A  SVEI
Sbjct: 756  IGWIYGSVTEDILTGFKMHARGWRSIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSVEI 815

Query: 183  LLSSHCPIWYGYGGQLKWLGRVAYINATICPLTSIPLFIYCTLPAILLLTRKFIIPMVSK 362
            LLS HCPIWYGYGG+LKWL R+AYIN T+ P+TSIPL +YCTLPAI LLT KFIIP +S 
Sbjct: 816  LLSRHCPIWYGYGGRLKWLERLAYINTTVYPITSIPLVVYCTLPAICLLTGKFIIPQIST 875

Query: 363  QASMLLILLFVSNFSNVILESRWSGVGIQEWWRNQQFWVIAGVSSHLFAVFQGLIKTLTG 542
             AS+  I LF+S F+  ILE RWSGVGI EWWRN+QFWVI GVS+HLFAV QGL+K L G
Sbjct: 876  FASLFFIALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAG 935

Query: 543  SKTGSSEIAKKS-YNGNTAEQYRFKVTSLFVFPTTLILINLWAMFAGIFSAASSGYWSWV 719
              T  +  +K S  +G+ AE Y FK T+L + PTTL++IN+  + AGI  A SSGY +W 
Sbjct: 936  IDTNFTVTSKASDEDGDFAELYLFKWTALLIPPTTLLVINIVGVVAGISQAISSGYAAWG 995

Query: 720  LLFYRLLFAFCVVVHLHPFLKGLFARKNRIPTVVVVWSLLLATLFSLFWVRVSPFTTTFR 899
             LF +L FAF V+VHL+PFLKGL  R+NR PT+VVVWS+LLA++FSL WVR+ PFTT  +
Sbjct: 996  PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTTQIK 1055

Query: 900  GPDSKECGVQC 932
            GPD ++CG+ C
Sbjct: 1056 GPDLQQCGINC 1066


>ref|XP_002298432.1| cellulose synthase [Populus trichocarpa] gi|222845690|gb|EEE83237.1|
            cellulose synthase [Populus trichocarpa]
          Length = 1081

 Score =  414 bits (1065), Expect = e-113
 Identities = 200/311 (64%), Positives = 239/311 (76%), Gaps = 1/311 (0%)
 Frame = +3

Query: 3    IGWIYGSQISNILAGFKMHSRGWRSVYCMPARSAFRGSAPINLSGSLSQVFQLAFDSVEI 182
            IGWIYGS   +IL GFKMH+RGWRS+YCMP R AF+GSAPINLS  L+QV + A  SVEI
Sbjct: 771  IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEI 830

Query: 183  LLSSHCPIWYGYGGQLKWLGRVAYINATICPLTSIPLFIYCTLPAILLLTRKFIIPMVSK 362
            LLS HCPIWYGYGG+LKWL R AY+N TI P+T+IPL +YCTLPAI LLT KFIIP +S 
Sbjct: 831  LLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLLYCTLPAICLLTDKFIIPQISN 890

Query: 363  QASMLLILLFVSNFSNVILESRWSGVGIQEWWRNQQFWVIAGVSSHLFAVFQGLIKTLTG 542
             AS+  I LF+S F+  ILE RWSGVGI EWWRN+QFWVI GVS+HLFAVFQGL+K L G
Sbjct: 891  IASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAG 950

Query: 543  SKTGSSEIAKKS-YNGNTAEQYRFKVTSLFVFPTTLILINLWAMFAGIFSAASSGYWSWV 719
              T  +  +K S  +G  AE Y FK T+L + PTTL+++NL  + AGI  A +SGY SW 
Sbjct: 951  IDTNFTVTSKASDEDGGFAELYLFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWG 1010

Query: 720  LLFYRLLFAFCVVVHLHPFLKGLFARKNRIPTVVVVWSLLLATLFSLFWVRVSPFTTTFR 899
             LF +L FAF V+VHL+PFLKGL  R+NR PT+VVVWS+LLA++FSL WVRV PFTT   
Sbjct: 1011 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVT 1070

Query: 900  GPDSKECGVQC 932
            GPD ++CG+ C
Sbjct: 1071 GPDVEQCGINC 1081


>gb|AFZ78554.1| cellulose synthase [Populus tomentosa]
          Length = 1079

 Score =  414 bits (1063), Expect = e-113
 Identities = 199/311 (63%), Positives = 240/311 (77%), Gaps = 1/311 (0%)
 Frame = +3

Query: 3    IGWIYGSQISNILAGFKMHSRGWRSVYCMPARSAFRGSAPINLSGSLSQVFQLAFDSVEI 182
            IGWIYGS   +IL GFKMH+RGWRS+YCMP R AF+GSAPINLS  L+QV + A  SVEI
Sbjct: 769  IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEI 828

Query: 183  LLSSHCPIWYGYGGQLKWLGRVAYINATICPLTSIPLFIYCTLPAILLLTRKFIIPMVSK 362
            LLS HCPIWYGYGG+LKWL R AY+N TI P+T+IPL +YCTLPAI LLT KFIIP +S 
Sbjct: 829  LLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLLYCTLPAICLLTDKFIIPQISN 888

Query: 363  QASMLLILLFVSNFSNVILESRWSGVGIQEWWRNQQFWVIAGVSSHLFAVFQGLIKTLTG 542
             AS+  I LF+S F+  ILE RWSGVGI EWWRN+QFWVI GVS+HLFAVFQGL+K L G
Sbjct: 889  IASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAG 948

Query: 543  SKTGSSEIAKKS-YNGNTAEQYRFKVTSLFVFPTTLILINLWAMFAGIFSAASSGYWSWV 719
              T  +  +K S  +G++AE Y FK T+L + PTTL+++NL  + AGI  A +SGY SW 
Sbjct: 949  IDTNFTVTSKASDEDGDSAELYLFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWG 1008

Query: 720  LLFYRLLFAFCVVVHLHPFLKGLFARKNRIPTVVVVWSLLLATLFSLFWVRVSPFTTTFR 899
             LF +L FAF V+VHL+PFLKGL  R+NR PT+VVVWS+LLA++FSL WVRV PFT    
Sbjct: 1009 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTIRVT 1068

Query: 900  GPDSKECGVQC 932
            GPD ++CG+ C
Sbjct: 1069 GPDVEQCGINC 1079


>gb|AFZ78557.1| cellulose synthase [Populus tomentosa]
          Length = 1079

 Score =  413 bits (1062), Expect = e-113
 Identities = 199/311 (63%), Positives = 238/311 (76%), Gaps = 1/311 (0%)
 Frame = +3

Query: 3    IGWIYGSQISNILAGFKMHSRGWRSVYCMPARSAFRGSAPINLSGSLSQVFQLAFDSVEI 182
            IGWIYGS   +IL GFKMH+RGWRS+YCMP R AF+GSAPINLS  L+QV + A  SVEI
Sbjct: 769  IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEI 828

Query: 183  LLSSHCPIWYGYGGQLKWLGRVAYINATICPLTSIPLFIYCTLPAILLLTRKFIIPMVSK 362
            LLS HCPIWYGYGG+LKWL R AY+N TI P+T+IPL  YCTLPAI LLT KFIIP +S 
Sbjct: 829  LLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLFYCTLPAICLLTDKFIIPQISN 888

Query: 363  QASMLLILLFVSNFSNVILESRWSGVGIQEWWRNQQFWVIAGVSSHLFAVFQGLIKTLTG 542
             AS+  I LF+S F+  ILE RWSGVGI EWWRN+QFWVI GVS+HLFAVFQGL+K L G
Sbjct: 889  IASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAG 948

Query: 543  SKTGSSEIAKKS-YNGNTAEQYRFKVTSLFVFPTTLILINLWAMFAGIFSAASSGYWSWV 719
              T  +  +K S  +G+  E Y FK T+L + PTTL+++NL  + AGI  A +SGY SW 
Sbjct: 949  IDTNFTVTSKSSDEDGDFTELYMFKWTTLLIPPTTLLIVNLVGVVAGISHAINSGYQSWG 1008

Query: 720  LLFYRLLFAFCVVVHLHPFLKGLFARKNRIPTVVVVWSLLLATLFSLFWVRVSPFTTTFR 899
             LF +L FAF V+VHL+PFLKGL  R+NR PT+VVVWS+LLA++FSL WVRV PFTT   
Sbjct: 1009 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVT 1068

Query: 900  GPDSKECGVQC 932
            GPD ++CG+ C
Sbjct: 1069 GPDVEQCGINC 1079


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