BLASTX nr result

ID: Cimicifuga21_contig00009357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009357
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300862.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002459368.1| hypothetical protein SORBIDRAFT_02g003395 [S...    93   2e-17
ref|XP_003561412.1| PREDICTED: uncharacterized protein LOC100835...    92   3e-17
ref|NP_001159160.1| hypothetical protein [Zea mays] gi|223942363...    91   7e-17
ref|XP_002278640.1| PREDICTED: uncharacterized protein LOC100250...    91   1e-16

>ref|XP_002300862.1| predicted protein [Populus trichocarpa] gi|222842588|gb|EEE80135.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 4/74 (5%)
 Frame = +2

Query: 2   PGTGKSTVAHAIATTLKYPLIDKDDVRDCTLTLTTSSSAKH----LNDLSYQVIWQIAKT 169
           PGTGKST+A ++A++LK PLIDKDDVRDCT+++  SS A      LNDLSY V+WQIA T
Sbjct: 21  PGTGKSTLASSLASSLKIPLIDKDDVRDCTVSIQNSSPATASKVLLNDLSYDVVWQIAST 80

Query: 170 QLGLGLSVVIDSPL 211
           QL LGLSV+IDSPL
Sbjct: 81  QLRLGLSVIIDSPL 94


>ref|XP_002459368.1| hypothetical protein SORBIDRAFT_02g003395 [Sorghum bicolor]
           gi|241922745|gb|EER95889.1| hypothetical protein
           SORBIDRAFT_02g003395 [Sorghum bicolor]
          Length = 220

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/70 (65%), Positives = 56/70 (80%)
 Frame = +2

Query: 2   PGTGKSTVAHAIATTLKYPLIDKDDVRDCTLTLTTSSSAKHLNDLSYQVIWQIAKTQLGL 181
           PG+GKST A AIA  L +PL+DKDDVRDCTL L   ++A  LNDLSY V+W++A+ Q+ L
Sbjct: 21  PGSGKSTAARAIAAALGWPLLDKDDVRDCTLPLEGLAAAGILNDLSYAVLWRMAERQVRL 80

Query: 182 GLSVVIDSPL 211
           GLSVVIDSPL
Sbjct: 81  GLSVVIDSPL 90


>ref|XP_003561412.1| PREDICTED: uncharacterized protein LOC100835907 [Brachypodium
           distachyon]
          Length = 202

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/72 (62%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
 Frame = +2

Query: 2   PGTGKSTVAHAIATTLKYPLIDKDDVRDCTLTLTTSSSAKH--LNDLSYQVIWQIAKTQL 175
           PG+GKST AHAIA  L+ PL+DKDDVRDCTL L  +++     LN+LSY V+W++A+ QL
Sbjct: 24  PGSGKSTAAHAIAAALRCPLLDKDDVRDCTLRLERAAAGDSGMLNELSYAVLWRVAEKQL 83

Query: 176 GLGLSVVIDSPL 211
            LGLSVV+DSPL
Sbjct: 84  RLGLSVVVDSPL 95


>ref|NP_001159160.1| hypothetical protein [Zea mays] gi|223942363|gb|ACN25265.1| unknown
           [Zea mays] gi|414883595|tpg|DAA59609.1| TPA:
           hypothetical protein ZEAMMB73_694502 [Zea mays]
          Length = 211

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/70 (65%), Positives = 55/70 (78%)
 Frame = +2

Query: 2   PGTGKSTVAHAIATTLKYPLIDKDDVRDCTLTLTTSSSAKHLNDLSYQVIWQIAKTQLGL 181
           PG+GKST A AIAT L  PL+DKDDVRDC L L   ++A  LNDLSY V+W++A+ Q+ L
Sbjct: 20  PGSGKSTAARAIATALCCPLLDKDDVRDCMLPLEGLAAAGMLNDLSYAVLWRMAERQVRL 79

Query: 182 GLSVVIDSPL 211
           GLSVVIDSPL
Sbjct: 80  GLSVVIDSPL 89


>ref|XP_002278640.1| PREDICTED: uncharacterized protein LOC100250574 [Vitis vinifera]
           gi|302143513|emb|CBI22074.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/70 (67%), Positives = 54/70 (77%)
 Frame = +2

Query: 2   PGTGKSTVAHAIATTLKYPLIDKDDVRDCTLTLTTSSSAKHLNDLSYQVIWQIAKTQLGL 181
           PG+GKST+A +IA  L+ PLIDKDDVRD T  L  S+  + LN LSY VIWQIA TQL L
Sbjct: 21  PGSGKSTLAQSIARVLRCPLIDKDDVRDSTSPLEPSTPDRLLNALSYDVIWQIASTQLRL 80

Query: 182 GLSVVIDSPL 211
           GLSVV+DSPL
Sbjct: 81  GLSVVLDSPL 90


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