BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009323
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   155   1e-40
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   149   5e-39
ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-...   149   1e-38
ref|XP_004170489.1| PREDICTED: DNA excision repair protein ERCC-...   146   1e-38
ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-...   146   2e-38

>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  155 bits (391), Expect(2) = 1e-40
 Identities = 73/95 (76%), Positives = 83/95 (87%)
 Frame = +2

Query: 53   KKDVIVYRLMMCGTIEEKIYKMQVFKGGLFKTATEQKEQTRYLSQQDLRELFSLPKEGFD 232
            KKDV+VYRLM CGT+EEKIY+ QV+KGGLFKTATE KEQ RY SQQDLRELFSLPKEGFD
Sbjct: 797  KKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSLPKEGFD 856

Query: 233  VSFTQRQLDEEHNQQHIIDDSLAQHIEFLESRDIA 337
            VS TQRQL+EEH++QH +DDS   H+EFL+S  IA
Sbjct: 857  VSVTQRQLNEEHDRQHTVDDSFRAHLEFLKSHSIA 891



 Score = 37.7 bits (86), Expect(2) = 1e-40
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 3   TLTNADRVIVVDPAWNP 53
           TLT ADRVIVVDPAWNP
Sbjct: 765 TLTRADRVIVVDPAWNP 781


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
            gi|296088517|emb|CBI37508.3| unnamed protein product
            [Vitis vinifera]
          Length = 1043

 Score =  149 bits (376), Expect(2) = 5e-39
 Identities = 71/94 (75%), Positives = 83/94 (88%)
 Frame = +2

Query: 56   KDVIVYRLMMCGTIEEKIYKMQVFKGGLFKTATEQKEQTRYLSQQDLRELFSLPKEGFDV 235
            KDVIVYRLM CGTIEEKIY+ Q+FKGGLF+TATE KEQTRY SQQDL+ELFSLPK GFDV
Sbjct: 803  KDVIVYRLMTCGTIEEKIYRKQIFKGGLFRTATEHKEQTRYFSQQDLQELFSLPKHGFDV 862

Query: 236  SFTQRQLDEEHNQQHIIDDSLAQHIEFLESRDIA 337
            S TQ+QL EEH+ QH +D+SL +HI+FLE++ IA
Sbjct: 863  SVTQQQLHEEHDHQHNMDESLKEHIKFLETQGIA 896



 Score = 37.7 bits (86), Expect(2) = 5e-39
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 3   TLTNADRVIVVDPAWNP 53
           TLT ADRVIVVDPAWNP
Sbjct: 770 TLTKADRVIVVDPAWNP 786


>ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 938

 Score =  149 bits (376), Expect(2) = 1e-38
 Identities = 71/95 (74%), Positives = 82/95 (86%)
 Frame = +2

Query: 53   KKDVIVYRLMMCGTIEEKIYKMQVFKGGLFKTATEQKEQTRYLSQQDLRELFSLPKEGFD 232
            KKDV+VYRLM CGT+EEKIY+ QV+KGGLFK ATE KEQ RY SQQDLR LFSLPKEGFD
Sbjct: 732  KKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKIATEHKEQIRYFSQQDLRGLFSLPKEGFD 791

Query: 233  VSFTQRQLDEEHNQQHIIDDSLAQHIEFLESRDIA 337
            VS TQRQL+EEH++QH +DDS   HI+FL+S+ IA
Sbjct: 792  VSVTQRQLNEEHDRQHTVDDSFKAHIKFLKSQGIA 826



 Score = 36.6 bits (83), Expect(2) = 1e-38
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 3   TLTNADRVIVVDPAWNP 53
           TLT ADRVIVVDP+WNP
Sbjct: 700 TLTRADRVIVVDPSWNP 716


>ref|XP_004170489.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
           [Cucumis sativus]
          Length = 516

 Score =  146 bits (368), Expect(3) = 1e-38
 Identities = 70/95 (73%), Positives = 82/95 (86%)
 Frame = +2

Query: 53  KKDVIVYRLMMCGTIEEKIYKMQVFKGGLFKTATEQKEQTRYLSQQDLRELFSLPKEGFD 232
           KKDVIVYRLM CGT+EEKIY+ QV+KGGLFKTATE KEQ RY SQQDLRELFSLP+EGFD
Sbjct: 278 KKDVIVYRLMTCGTVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSLPEEGFD 337

Query: 233 VSFTQRQLDEEHNQQHIIDDSLAQHIEFLESRDIA 337
            S TQ+Q+ EEH+QQ  +D+SL  HI+FLE++ IA
Sbjct: 338 TSVTQQQMHEEHDQQLAMDESLRSHIKFLETQGIA 372



 Score = 37.7 bits (86), Expect(3) = 1e-38
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 3   TLTNADRVIVVDPAWNP 53
           TLT ADRVIVVDPAWNP
Sbjct: 246 TLTRADRVIVVDPAWNP 262



 Score = 22.3 bits (46), Expect(3) = 1e-38
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 355 LLFSKTTPTPAPVPDENEVLRRK 423
           LLFSKT P P    +E +   R+
Sbjct: 379 LLFSKTAPEPVYALEEEDTSFRR 401


>ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis sativus]
          Length = 1016

 Score =  146 bits (368), Expect(3) = 2e-38
 Identities = 70/95 (73%), Positives = 82/95 (86%)
 Frame = +2

Query: 53   KKDVIVYRLMMCGTIEEKIYKMQVFKGGLFKTATEQKEQTRYLSQQDLRELFSLPKEGFD 232
            KKDVIVYRLM CGT+EEKIY+ QV+KGGLFKTATE KEQ RY SQQDLRELFSLP+EGFD
Sbjct: 801  KKDVIVYRLMTCGTVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSLPEEGFD 860

Query: 233  VSFTQRQLDEEHNQQHIIDDSLAQHIEFLESRDIA 337
             S TQ+Q+ EEH+QQ  +D+SL  HI+FLE++ IA
Sbjct: 861  TSVTQQQMHEEHDQQLAMDESLRSHIKFLETQGIA 895



 Score = 37.7 bits (86), Expect(3) = 2e-38
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 3   TLTNADRVIVVDPAWNP 53
           TLT ADRVIVVDPAWNP
Sbjct: 769 TLTRADRVIVVDPAWNP 785



 Score = 21.6 bits (44), Expect(3) = 2e-38
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 355 LLFSKTTPTPAPVPDENE 408
           LLFSKT P P    +E +
Sbjct: 902 LLFSKTAPEPVYALEEED 919