BLASTX nr result

ID: Cimicifuga21_contig00009320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009320
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325144.1| predicted protein [Populus trichocarpa] gi|1...   337   4e-90
ref|XP_002308390.1| predicted protein [Populus trichocarpa] gi|1...   335   1e-89
ref|XP_002279200.1| PREDICTED: trafficking protein particle comp...   334   2e-89
ref|XP_002523497.1| Transport protein particle subunit trs31, pu...   333   3e-89
ref|NP_001237511.1| uncharacterized protein LOC100500147 [Glycin...   331   2e-88

>ref|XP_002325144.1| predicted protein [Populus trichocarpa] gi|118489123|gb|ABK96368.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222866578|gb|EEF03709.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score =  337 bits (863), Expect = 4e-90
 Identities = 170/194 (87%), Positives = 174/194 (89%)
 Frame = +3

Query: 78  MIGAGKTKQYTNVVDKPLSKGKQXXXXXXXXXXXXXXXQYNQTQVDNIAELERRLEDAGY 257
           MIG GK KQY+NV+DKPLSKGKQ               QYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSSSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 258 AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 437
           AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 438 KELLVNRFISVPKDMGTFNCGAFAAGIVRGVLDGAGFPAVVTAHFVPVEGQLRPRTTILI 617
           KELLVNRFIS+PKDMGTFNCGAF AGIVRGVLDGAGFPAVVTAHFVP+EGQ RPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQHRPRTTILI 180

Query: 618 KFAEEVLRREARLG 659
           KF EEVLRREARLG
Sbjct: 181 KFGEEVLRREARLG 194


>ref|XP_002308390.1| predicted protein [Populus trichocarpa] gi|118483059|gb|ABK93439.1|
           unknown [Populus trichocarpa]
           gi|222854366|gb|EEE91913.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score =  335 bits (858), Expect = 1e-89
 Identities = 169/194 (87%), Positives = 174/194 (89%)
 Frame = +3

Query: 78  MIGAGKTKQYTNVVDKPLSKGKQXXXXXXXXXXXXXXXQYNQTQVDNIAELERRLEDAGY 257
           MIG GK KQY+NV++KPLSKGKQ               QYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 258 AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 437
           AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 438 KELLVNRFISVPKDMGTFNCGAFAAGIVRGVLDGAGFPAVVTAHFVPVEGQLRPRTTILI 617
           KELLVNRFIS+PKDMGTFNCGAF AGIVRGVLD AGFPAVVTAHFVP+EGQ RPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 618 KFAEEVLRREARLG 659
           KFAEEVLRREARLG
Sbjct: 181 KFAEEVLRREARLG 194


>ref|XP_002279200.1| PREDICTED: trafficking protein particle complex subunit 5 [Vitis
           vinifera] gi|297743638|emb|CBI36521.3| unnamed protein
           product [Vitis vinifera]
          Length = 194

 Score =  334 bits (857), Expect = 2e-89
 Identities = 169/194 (87%), Positives = 173/194 (89%)
 Frame = +3

Query: 78  MIGAGKTKQYTNVVDKPLSKGKQXXXXXXXXXXXXXXXQYNQTQVDNIAELERRLEDAGY 257
           MIG GK KQY+NV+DKPLSKGKQ               QYNQ QVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQAQVDNIAELERRLEDAGY 60

Query: 258 AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 437
           AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 438 KELLVNRFISVPKDMGTFNCGAFAAGIVRGVLDGAGFPAVVTAHFVPVEGQLRPRTTILI 617
           KELLVNRFIS+PKDMGTFNCGAF AGIVRGVLD AGFPAVVTAHFVP+EGQ RPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 618 KFAEEVLRREARLG 659
           KFAEEVLRREARLG
Sbjct: 181 KFAEEVLRREARLG 194


>ref|XP_002523497.1| Transport protein particle subunit trs31, putative [Ricinus
           communis] gi|223537204|gb|EEF38836.1| Transport protein
           particle subunit trs31, putative [Ricinus communis]
          Length = 194

 Score =  333 bits (855), Expect = 3e-89
 Identities = 168/194 (86%), Positives = 174/194 (89%)
 Frame = +3

Query: 78  MIGAGKTKQYTNVVDKPLSKGKQXXXXXXXXXXXXXXXQYNQTQVDNIAELERRLEDAGY 257
           MIG GK KQY+NV+DKPLSKGKQ               QYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 258 AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 437
           AVGARVLELLCHR+KGNRRETRLLGILSFVH+TVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHTTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 438 KELLVNRFISVPKDMGTFNCGAFAAGIVRGVLDGAGFPAVVTAHFVPVEGQLRPRTTILI 617
           KELLVNRFIS+PKDMGTFNCGAF AGIVRGVLD AGFPAVVTAHFVP+EGQ RPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 618 KFAEEVLRREARLG 659
           KFAEEVLRREARLG
Sbjct: 181 KFAEEVLRREARLG 194


>ref|NP_001237511.1| uncharacterized protein LOC100500147 [Glycine max]
           gi|255629460|gb|ACU15076.1| unknown [Glycine max]
          Length = 194

 Score =  331 bits (849), Expect = 2e-88
 Identities = 166/194 (85%), Positives = 173/194 (89%)
 Frame = +3

Query: 78  MIGAGKTKQYTNVVDKPLSKGKQXXXXXXXXXXXXXXXQYNQTQVDNIAELERRLEDAGY 257
           MIG GK KQY+NV+DKPL++GKQ               QYNQTQVDNI ELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLTRGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY 60

Query: 258 AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 437
           AVGARVLELLCHRDKGNRRETRLL ILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLNILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 438 KELLVNRFISVPKDMGTFNCGAFAAGIVRGVLDGAGFPAVVTAHFVPVEGQLRPRTTILI 617
           KELLVN+FIS+PKDMGTFNCGAF AGIVRGVLDGAGFPAVVTAHFVP+EGQ RPRTTILI
Sbjct: 121 KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 618 KFAEEVLRREARLG 659
           KFAEEVLRREARLG
Sbjct: 181 KFAEEVLRREARLG 194


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