BLASTX nr result

ID: Cimicifuga21_contig00009307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009307
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223...    98   8e-19
ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...    97   1e-18
gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]                        95   7e-18
ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus...    90   2e-16
gb|ADG86424.1| cyclin D1 [Passiflora morifolia]                        79   4e-13

>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
           cyclin d, putative [Ricinus communis]
          Length = 386

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = +1

Query: 88  SGEKW*SAIMSLNSCSDWFSNLLCCEETGIL--TNDLPEYSSSIEFPADIEELIAGFIEE 261
           S EK  +AIMSL SCSD F++LLC E++  +  T D PEYSS +E PA   E IA FIE+
Sbjct: 31  SNEKSPAAIMSL-SCSDCFNDLLCSEDSSEIFSTGDSPEYSSDLESPAGTVESIASFIED 89

Query: 262 EGDYMPRFDYQEMFQSQLIDASARSDSVAWILK 360
           E +++P FDY   FQS+ +DASAR DSVAWILK
Sbjct: 90  ERNFVPGFDYLSRFQSRSLDASAREDSVAWILK 122


>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/82 (62%), Positives = 63/82 (76%)
 Frame = +1

Query: 115 MSLNSCSDWFSNLLCCEETGILTNDLPEYSSSIEFPADIEELIAGFIEEEGDYMPRFDYQ 294
           MSL S SD FS+LLC E++ IL+ DLPE SS +E P DIEE IAGFIE+E +++P FDY 
Sbjct: 1   MSL-SYSDRFSDLLCGEDSSILSGDLPECSSDLESPTDIEESIAGFIEDERNFVPGFDYL 59

Query: 295 EMFQSQLIDASARSDSVAWILK 360
             F+S  +DASAR +SVAWILK
Sbjct: 60  ARFRSHSLDASAREESVAWILK 81


>gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
          Length = 315

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = +1

Query: 127 SCSDWFSNLLCCEETGILT-NDLPEYSSSIEFPADIEELIAGFIEEEGDYMPRFDYQEMF 303
           SCSD FS+LLCCE++GIL+ +D PE S   E+  D ++ IA FIE+E  ++P  DY E F
Sbjct: 4   SCSDCFSDLLCCEDSGILSGDDRPECSYDFEYSGDFDDSIAEFIEQERKFVPGIDYVERF 63

Query: 304 QSQLIDASARSDSVAWILK 360
           QSQ++DASAR +SVAWILK
Sbjct: 64  QSQVLDASAREESVAWILK 82


>ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
           gi|449527605|ref|XP_004170800.1| PREDICTED:
           cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/85 (57%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
 Frame = +1

Query: 115 MSLNSCSDWF--SNLLCCEET-GILTNDLPEYSSSIEFPADIEELIAGFIEEEGDYMPRF 285
           MS++S SD F  S+LLC E++ GIL+ DL EYSS +E PA  E+ IA FIE+E  ++P  
Sbjct: 1   MSISSSSDCFIDSHLLCDEDSSGILSGDLLEYSSDLESPASSEDSIASFIEDERHFVPGI 60

Query: 286 DYQEMFQSQLIDASARSDSVAWILK 360
           DY   FQSQ +D+SAR+DSVAWILK
Sbjct: 61  DYLSRFQSQSLDSSARADSVAWILK 85


>gb|ADG86424.1| cyclin D1 [Passiflora morifolia]
          Length = 331

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
 Frame = +1

Query: 127 SCSDWFSNLLCCEETG-ILTNDLPEYSSS-IEFPAD-IEELIAGFIEEEGDYMPRFDYQE 297
           SCS   S+LLC E++  IL+ + PE SSS +E+P   IEE IAG+IE+E +++P  DY  
Sbjct: 4   SCSQCLSDLLCGEDSSEILSGESPESSSSDVEYPGGFIEESIAGYIEDERNFVPGVDYLS 63

Query: 298 MFQSQLIDASARSDSVAWILK 360
            FQS+ +DASAR +SVAWILK
Sbjct: 64  RFQSRSLDASAREESVAWILK 84


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