BLASTX nr result

ID: Cimicifuga21_contig00009297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009297
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237874.1| uncharacterized protein LOC100305865 precurs...   162   6e-38
ref|XP_002262831.1| PREDICTED: blue copper protein [Vitis vinife...   158   1e-36
gb|AFK46705.1| unknown [Lotus japonicus]                              156   3e-36
ref|XP_002298616.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34
ref|XP_003618846.1| Plastocyanin-like domain-containing protein ...   145   7e-33

>ref|NP_001237874.1| uncharacterized protein LOC100305865 precursor [Glycine max]
           gi|255626823|gb|ACU13756.1| unknown [Glycine max]
          Length = 162

 Score =  162 bits (410), Expect = 6e-38
 Identities = 77/117 (65%), Positives = 90/117 (76%), Gaps = 4/117 (3%)
 Frame = -3

Query: 661 IFLVIYVTLAARQVLATQHEVT----WDTSTDLGSWASGRTFKVGDNLVFKYSGGLHSVI 494
           IFL + VTL  ++ +A QH V     WD STD  SW SG+TFKVGD LVFKYS  LHSV+
Sbjct: 7   IFLALVVTLITKETMAEQHVVGGSQGWDESTDFNSWVSGQTFKVGDQLVFKYSS-LHSVV 65

Query: 493 ELSGEKEYGNCDIGNAINSMNGGKDVVKLTKPGTRYFACGTLGHCDQGMKLKVKTVA 323
           EL  E EY NCD+GNA+NSM+ G DVVKL KPGTRYFACGT+GHCDQGMK+K+ TV+
Sbjct: 66  ELGSESEYKNCDLGNAVNSMSSGNDVVKLNKPGTRYFACGTMGHCDQGMKVKITTVS 122


>ref|XP_002262831.1| PREDICTED: blue copper protein [Vitis vinifera]
           gi|296090231|emb|CBI40050.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  158 bits (399), Expect = 1e-36
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 5/125 (4%)
 Frame = -3

Query: 679 MNGVY-IIFLVIYVTLAARQVLATQHEVT----WDTSTDLGSWASGRTFKVGDNLVFKYS 515
           M G+Y ++  ++ V L   + LATQH V     WD S+D   WASG+TF+VGD LVFKY+
Sbjct: 1   MEGLYRVLSALVVVGLLTNKALATQHVVGGSQGWDESSDYSKWASGQTFEVGDQLVFKYT 60

Query: 514 GGLHSVIELSGEKEYGNCDIGNAINSMNGGKDVVKLTKPGTRYFACGTLGHCDQGMKLKV 335
            GLHSV+EL  E  Y NCD+G+A+NSMN G +VVKL+K GTRYFACGT+GHCDQGMKLKV
Sbjct: 61  PGLHSVVELPNESAYKNCDVGSALNSMNSGNNVVKLSKAGTRYFACGTIGHCDQGMKLKV 120

Query: 334 KTVAA 320
            TV+A
Sbjct: 121 STVSA 125


>gb|AFK46705.1| unknown [Lotus japonicus]
          Length = 162

 Score =  156 bits (395), Expect = 3e-36
 Identities = 72/115 (62%), Positives = 86/115 (74%), Gaps = 4/115 (3%)
 Frame = -3

Query: 661 IFLVIYVTLAARQVLATQHEVT----WDTSTDLGSWASGRTFKVGDNLVFKYSGGLHSVI 494
           IFL + V+L  ++ LA QH V     WD STD  SW SG+TF VGD LVFKYS GLHSV+
Sbjct: 7   IFLALVVSLITKEALAEQHVVGGSQGWDQSTDFNSWVSGKTFNVGDQLVFKYSSGLHSVV 66

Query: 493 ELSGEKEYGNCDIGNAINSMNGGKDVVKLTKPGTRYFACGTLGHCDQGMKLKVKT 329
           EL  E +Y NCDIG+A+N+M+ G D VKL+KPGTRYFACGT GHC QGMK+K+ T
Sbjct: 67  ELGSESDYKNCDIGSAVNTMSSGNDAVKLSKPGTRYFACGTSGHCSQGMKVKITT 121


>ref|XP_002298616.1| predicted protein [Populus trichocarpa] gi|222845874|gb|EEE83421.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  150 bits (378), Expect = 3e-34
 Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 4/111 (3%)
 Frame = -3

Query: 655 LVIYVTLAARQVLATQHEVT----WDTSTDLGSWASGRTFKVGDNLVFKYSGGLHSVIEL 488
           ++++V L  ++ +A QH V     W+ STD  SWASG+ FKVGD LVFKY+ GLHSV+EL
Sbjct: 2   VLVFVALITKEAMAAQHVVGGSQGWEESTDFSSWASGQKFKVGDQLVFKYTSGLHSVVEL 61

Query: 487 SGEKEYGNCDIGNAINSMNGGKDVVKLTKPGTRYFACGTLGHCDQGMKLKV 335
            GE  Y +C +G A+NSMN G DVVKL KPGTRYFACGTLGHC QGMK+K+
Sbjct: 62  GGESAYKSCGLGTALNSMNTGNDVVKLNKPGTRYFACGTLGHCGQGMKVKI 112


>ref|XP_003618846.1| Plastocyanin-like domain-containing protein [Medicago truncatula]
           gi|355493861|gb|AES75064.1| Plastocyanin-like
           domain-containing protein [Medicago truncatula]
           gi|388516811|gb|AFK46467.1| unknown [Medicago
           truncatula]
          Length = 179

 Score =  145 bits (366), Expect = 7e-33
 Identities = 69/114 (60%), Positives = 85/114 (74%), Gaps = 4/114 (3%)
 Frame = -3

Query: 664 IIFLVIYVTLAARQVLATQHEVT----WDTSTDLGSWASGRTFKVGDNLVFKYSGGLHSV 497
           I+  ++  TL  ++VLATQH V     WD S+D  SW+SG+TFKVGD LVFKY+  +HSV
Sbjct: 7   ILLALLLATLITKEVLATQHNVGGSQGWDPSSDFDSWSSGQTFKVGDQLVFKYTS-MHSV 65

Query: 496 IELSGEKEYGNCDIGNAINSMNGGKDVVKLTKPGTRYFACGTLGHCDQGMKLKV 335
           +ELS E  Y  CDI   +NS++ GKDVVKL KPGTRYF CGTLGHCDQGMK+K+
Sbjct: 66  VELSDESAYKKCDISTPLNSLSTGKDVVKLDKPGTRYFTCGTLGHCDQGMKVKI 119


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