BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009292
         (1843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   496   e-138
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   494   e-137
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   478   e-132
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              432   e-118
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   431   e-118

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  496 bits (1277), Expect = e-138
 Identities = 243/470 (51%), Positives = 345/470 (73%), Gaps = 2/470 (0%)
 Frame = +2

Query: 143  DPETSILYRRLSALGGRSDVNAGDTINEWVKEGKTVNKSEIIGFVYQLRKYKKYDHAIQL 322
            D E S LY +LSAL G ++ +  +T+++WVKEGK+V + ++I  V QLR++KKY HA Q+
Sbjct: 26   DKEAS-LYWKLSALRG-TEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQI 83

Query: 323  LEWLDKTSRRLSLSDQAVHLDLIAKAKGVDSAEEYFMSLPESSKNKLTYGALLNCYCKEK 502
             EW++K+   L+ +D+A+ +DL+AK +G+  AE YF SL ES+K   TYGALLNCYCKE 
Sbjct: 84   YEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKEN 143

Query: 503  MTEKAMDLLEEMKKLNIASTYLVYNNVISLHMKMGEPEKVPPLVQEMKEKNIRPDVYTYS 682
            M +KA++L +++K+LN  S+ L YNN+ISL++++G+PEKVP LV EM+EK+I  D+YTY+
Sbjct: 144  MVDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYN 203

Query: 683  FLMNSYALLKDIEGTERVFGEMKQSGVRRDWSTYANLASIYVKAGDFDKANSTLKEIEEM 862
             LMNSYA +KD E  E+V  +MK+ GV RDW TY NLA+IYV AG   KAN  L+++E+ 
Sbjct: 204  LLMNSYASVKDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQN 263

Query: 863  RGIHDRKAYYILIGLYSHTSNKLGVDRVWGSLKSAFPKLTNMCYLSKLQALHRLGDSDGL 1042
            + +HD +A+ +LI LY+ TSN  GV+R W SLK A PK+ N  YL  L AL +LGD  GL
Sbjct: 264  KNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGL 323

Query: 1043 KKCFEEWESGCSNYDIRLPNVLIDSYLSQDMVKEAEALHESALRKGGTTNFRTLEMFTNF 1222
            +KCF+EWESGCS YD+RL NV+++SYL+++M++EA  L ES  ++G     +TL++F  F
Sbjct: 324  EKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKF 383

Query: 1223 YLKKRQVDSALKCLEAAASKVN--DNKWKAIQDVVCNFQKYFEEEKDVDGAENLFKSLKK 1396
            YLKK Q+D A+K L+  ASK +  +NKW   ++ +  F +YFEE KDVD AE   ++++K
Sbjct: 384  YLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRK 443

Query: 1397 FKSIDSEAYDSLMRTYVAAGKREPQMRKRMKEDGIDIISPSSKKLIGKVC 1546
               +DS+ YDSL+RTY+AAGK EP M +RMK+DGI+ IS  ++KL+ KVC
Sbjct: 444  ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIE-ISSETEKLLQKVC 492


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial [Vitis vinifera]
            gi|296089781|emb|CBI39600.3| unnamed protein product
            [Vitis vinifera]
          Length = 498

 Score =  494 bits (1273), Expect = e-137
 Identities = 242/470 (51%), Positives = 345/470 (73%), Gaps = 2/470 (0%)
 Frame = +2

Query: 143  DPETSILYRRLSALGGRSDVNAGDTINEWVKEGKTVNKSEIIGFVYQLRKYKKYDHAIQL 322
            D E S LY +LSAL G ++ +  +T+++WVKEGK+V + ++I  V QLR++KKY HA Q+
Sbjct: 30   DKEAS-LYWKLSALRG-TEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQI 87

Query: 323  LEWLDKTSRRLSLSDQAVHLDLIAKAKGVDSAEEYFMSLPESSKNKLTYGALLNCYCKEK 502
             EW++K+   L+ +D+A+ +DL+AK +G+  AE YF SL ES+K   TYGALLNCYCKE 
Sbjct: 88   YEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKEN 147

Query: 503  MTEKAMDLLEEMKKLNIASTYLVYNNVISLHMKMGEPEKVPPLVQEMKEKNIRPDVYTYS 682
            M +KA++L +++K+LN  S+ L YNN+ISL++++G+PEKVP LV EM+EK+I  D+YTY+
Sbjct: 148  MLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYN 207

Query: 683  FLMNSYALLKDIEGTERVFGEMKQSGVRRDWSTYANLASIYVKAGDFDKANSTLKEIEEM 862
             LMNSYA +KD E  E+V  +MK+ GV RDW TY NLA+IYV AG   KAN  L+++E+ 
Sbjct: 208  LLMNSYASVKDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQN 267

Query: 863  RGIHDRKAYYILIGLYSHTSNKLGVDRVWGSLKSAFPKLTNMCYLSKLQALHRLGDSDGL 1042
            + +HD +A+ +LI LY+ TSN  GV+R W SLK A PK+ N  YL  L AL +LGD  GL
Sbjct: 268  KNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGL 327

Query: 1043 KKCFEEWESGCSNYDIRLPNVLIDSYLSQDMVKEAEALHESALRKGGTTNFRTLEMFTNF 1222
            +KCF+EWESGCS YD+RL NV+++SYL++++++EA  L ES  ++G     +TL++F  F
Sbjct: 328  EKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELKLKTLDLFMKF 387

Query: 1223 YLKKRQVDSALKCLEAAASKVN--DNKWKAIQDVVCNFQKYFEEEKDVDGAENLFKSLKK 1396
            YLKK Q+D A+K L+  ASK +  +NKW   ++ +  F +YFEE KDVD AE   ++++K
Sbjct: 388  YLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRK 447

Query: 1397 FKSIDSEAYDSLMRTYVAAGKREPQMRKRMKEDGIDIISPSSKKLIGKVC 1546
               +DS+ YDSL+RTY+AAGK EP M +RMK+DGI+ IS  ++KL+ KVC
Sbjct: 448  ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIE-ISSETEKLLQKVC 496


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  478 bits (1230), Expect = e-132
 Identities = 240/465 (51%), Positives = 327/465 (70%), Gaps = 1/465 (0%)
 Frame = +2

Query: 161  LYRRLSALGGRSDVNAGDTINEWVKEGKTVNKSEIIGFVYQLRKYKKYDHAIQLLEWLDK 340
            LY RLSALG     +  DT+NE +KEGK + K E+   + QLRKY+++ HA+++++W++ 
Sbjct: 46   LYHRLSALGATGG-SVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMEN 104

Query: 341  TSRRLSLSDQAVHLDLIAKAKGVDSAEEYFMSLPESSKNKLTYGALLNCYCKEKMTEKAM 520
                 S +D AV LDL++K KG+ +AEEYF +L  S+KN LTYG LLNCYCKEKM EKA+
Sbjct: 105  RKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKAL 164

Query: 521  DLLEEMKKLNIASTYLVYNNVISLHMKMGEPEKVPPLVQEMKEKNIRPDVYTYSFLMNSY 700
             L E+M +LN AST L +NN++SLHM++G+PE VPPLV EMK+++I PD +TY+ LM SY
Sbjct: 165  ALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSY 224

Query: 701  ALLKDIEGTERVFGEMKQSGVRR-DWSTYANLASIYVKAGDFDKANSTLKEIEEMRGIHD 877
            A L DIEG ERV  E+K+    +  W+TY+NLA++YV A  F+KA   LK++EE  G HD
Sbjct: 225  ARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHD 284

Query: 878  RKAYYILIGLYSHTSNKLGVDRVWGSLKSAFPKLTNMCYLSKLQALHRLGDSDGLKKCFE 1057
            R AY+ LI LY+  +N   V+RVW SLKSAFPK  NM Y   LQAL  L D DGLK CFE
Sbjct: 285  RLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFE 344

Query: 1058 EWESGCSNYDIRLPNVLIDSYLSQDMVKEAEALHESALRKGGTTNFRTLEMFTNFYLKKR 1237
            EW+S C ++D+RL NV + ++L  DM+K+AE++   A+++     +  L+MF   +LK R
Sbjct: 345  EWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVR 404

Query: 1238 QVDSALKCLEAAASKVNDNKWKAIQDVVCNFQKYFEEEKDVDGAENLFKSLKKFKSIDSE 1417
            ++D+ALK +EAAAS+V +N+W+   + V  F KYFEEEKDV+GAE   K LK    +DS 
Sbjct: 405  EIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISGLDSN 464

Query: 1418 AYDSLMRTYVAAGKREPQMRKRMKEDGIDIISPSSKKLIGKVCSE 1552
            AY  L++T VAAG+ EP+MRKRMKED I++    SK L+ +V  E
Sbjct: 465  AYQLLLQTXVAAGRTEPEMRKRMKEDDIEV---DSKDLLQRVGPE 506


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  432 bits (1111), Expect = e-118
 Identities = 214/412 (51%), Positives = 292/412 (70%), Gaps = 1/412 (0%)
 Frame = +2

Query: 161  LYRRLSALGGRSDVNAGDTINEWVKEGKTVNKSEIIGFVYQLRKYKKYDHAIQLLEWLDK 340
            LY RLSALG     +  DT+NE +KEGK + K E+   + QLRKY+++ HA+++++W++ 
Sbjct: 85   LYHRLSALGATGG-SVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMEN 143

Query: 341  TSRRLSLSDQAVHLDLIAKAKGVDSAEEYFMSLPESSKNKLTYGALLNCYCKEKMTEKAM 520
                 S +D AV LDL++K KG+ +AEEYF +L  S+KN LTYG LLNCYCKEKM EKA+
Sbjct: 144  RKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKAL 203

Query: 521  DLLEEMKKLNIASTYLVYNNVISLHMKMGEPEKVPPLVQEMKEKNIRPDVYTYSFLMNSY 700
             L E+M +LN AST L +NN++SLHM++G+PE VPPLV EMK+++I PD +TY+ LM SY
Sbjct: 204  ALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSY 263

Query: 701  ALLKDIEGTERVFGEMKQSGV-RRDWSTYANLASIYVKAGDFDKANSTLKEIEEMRGIHD 877
            A L DIEG ERV  E+K+    +  W+TY+NLA++YV A  F+KA   LK++EE  G HD
Sbjct: 264  ARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHD 323

Query: 878  RKAYYILIGLYSHTSNKLGVDRVWGSLKSAFPKLTNMCYLSKLQALHRLGDSDGLKKCFE 1057
            R AY+ LI LY+  +N   V+RVW SLKSAFPK  NM Y   LQAL  L D DGLK CFE
Sbjct: 324  RLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFE 383

Query: 1058 EWESGCSNYDIRLPNVLIDSYLSQDMVKEAEALHESALRKGGTTNFRTLEMFTNFYLKKR 1237
            EW+S C ++D+RL NV + ++L  DM+K+AE++   A+++     +  L+MF   +LK R
Sbjct: 384  EWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVR 443

Query: 1238 QVDSALKCLEAAASKVNDNKWKAIQDVVCNFQKYFEEEKDVDGAENLFKSLK 1393
            ++D+ALK +EAAAS+V +N+W+   + V  F KYFEEEKDV+GAE   K LK
Sbjct: 444  EIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILK 495


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
            predicted protein [Populus trichocarpa]
          Length = 473

 Score =  431 bits (1109), Expect = e-118
 Identities = 225/463 (48%), Positives = 315/463 (68%), Gaps = 1/463 (0%)
 Frame = +2

Query: 161  LYRRLSALGGRSDVNAGDTINEWVKEGKTVNKSEIIGFVYQLRKYKKYDHAIQLLEWLDK 340
            LY+RLS LG   + +   T+N++V EG   NK +++  + +LRKY ++D+AI+++EW+ K
Sbjct: 15   LYKRLSELGASGE-SVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWMQK 73

Query: 341  TSRRLSLSDQAVHLDLIAKAKGVDSAEEYFMSLPESSKNKLTYGALLNCYCKEKMTEKAM 520
              R++++S  AV+LDLIAK +G+ +AE YF  L  S +N  T+GALL+CYC+E M+EKA+
Sbjct: 74   --RKMNVS-HAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKAL 130

Query: 521  DLLEEMKKLNIASTYLVYNNVISLHMKMGEPEKVPPLVQEMKEKNIRPDVYTYSFLMNSY 700
             L E+M K+    T L +NN+ISLH+++ +PEKV P+VQEMK+K + P  +TY+  M SY
Sbjct: 131  TLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSY 190

Query: 701  ALLKDIEGTERVFGEMKQSGVRR-DWSTYANLASIYVKAGDFDKANSTLKEIEEMRGIHD 877
              L D EG ERV  EMK  G +   W+TY NLA+IYVKAG FDKA S LK++EE      
Sbjct: 191  GCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDY 250

Query: 878  RKAYYILIGLYSHTSNKLGVDRVWGSLKSAFPKLTNMCYLSKLQALHRLGDSDGLKKCFE 1057
            R+AY+ LI LY+ TSN   V+RVW SLKS F   TN+ YL+ L  L +L D +GL KCF+
Sbjct: 251  REAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFK 310

Query: 1058 EWESGCSNYDIRLPNVLIDSYLSQDMVKEAEALHESALRKGGTTNFRTLEMFTNFYLKKR 1237
            EWES C +YD+RL NV I + L  DM +EA  + + AL++     F   EMF  F+LK  
Sbjct: 311  EWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNH 370

Query: 1238 QVDSALKCLEAAASKVNDNKWKAIQDVVCNFQKYFEEEKDVDGAENLFKSLKKFKSIDSE 1417
            Q+D ALK ++AA S+V + +W+     V  F  YFE+EKDV+GAE L K LK    +DS 
Sbjct: 371  QLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHINRLDSN 430

Query: 1418 AYDSLMRTYVAAGKREPQMRKRMKEDGIDIISPSSKKLIGKVC 1546
            AYD L++TY+AAGK  P+MR+R++EDGI+ I+P  + L+ +VC
Sbjct: 431  AYDLLLKTYIAAGKLAPEMRQRLEEDGIE-INPELENLLERVC 472