BLASTX nr result

ID: Cimicifuga21_contig00009277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009277
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33995.1| unknown [Lotus japonicus]                              251   5e-65
emb|CBI17768.3| unnamed protein product [Vitis vinifera]              251   5e-65
ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vini...   249   2e-64
ref|XP_003549495.1| PREDICTED: xylose isomerase-like [Glycine max]    249   2e-64
gb|ACU18251.1| unknown [Glycine max]                                  249   2e-64

>gb|AFK33995.1| unknown [Lotus japonicus]
          Length = 173

 Score =  251 bits (642), Expect = 5e-65
 Identities = 116/160 (72%), Positives = 130/160 (81%)
 Frame = -1

Query: 482 KMKVRQILHLLLCSNVFLXXXXXAPQTCPXXXXXXXXXXXXGEWEGDFFPGIPKIKYEGP 303
           KMK  +IL LLLC  VF+     AP+TCP             EW+G+FFPGI KIKYEGP
Sbjct: 2   KMKPGEILLLLLCLKVFIYAVIDAPETCPANDLGKCGDSD--EWKGEFFPGISKIKYEGP 59

Query: 302 SSKNPLSYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGIQTKFWPWEDGTNSL 123
           SSKNPLS+KWYNAEEEILGKKMKDW RFSVAFWHTFRGTG DPFG  TK WPWEDG+NS+
Sbjct: 60  SSKNPLSFKWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPTKHWPWEDGSNSV 119

Query: 122 AMAKRRMKANFEFLNKLGVDYWCFHDRDIAPDGKTLKEAN 3
           +MAKRRM+ANFE +NKLGVD+WCFHDRDIAPDGKTL+E+N
Sbjct: 120 SMAKRRMRANFELINKLGVDFWCFHDRDIAPDGKTLEESN 159


>emb|CBI17768.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  251 bits (642), Expect = 5e-65
 Identities = 118/161 (73%), Positives = 128/161 (79%), Gaps = 1/161 (0%)
 Frame = -1

Query: 482 KMKVRQILHLLLCSNVF-LXXXXXAPQTCPXXXXXXXXXXXXGEWEGDFFPGIPKIKYEG 306
           KM   ++   LLC NV        +PQTCP             EWEG+FFPGIPKIKYEG
Sbjct: 48  KMMAGKVFLFLLCLNVVSFAVIASSPQTCPADDVSSKCGASD-EWEGEFFPGIPKIKYEG 106

Query: 305 PSSKNPLSYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGIQTKFWPWEDGTNS 126
           PSSKNPLSYKWYNA+EEILGKKMKDW+RFSVAFWHTFRGTG DPFG  TKFWPWEDGT+S
Sbjct: 107 PSSKNPLSYKWYNADEEILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDS 166

Query: 125 LAMAKRRMKANFEFLNKLGVDYWCFHDRDIAPDGKTLKEAN 3
           LAMAKRRM+ANFEF+ KLGVD WCFHDRDIAPDGKTL+EAN
Sbjct: 167 LAMAKRRMRANFEFIEKLGVDLWCFHDRDIAPDGKTLEEAN 207


>ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vinifera]
          Length = 478

 Score =  249 bits (637), Expect = 2e-64
 Identities = 117/160 (73%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 MKVRQILHLLLCSNVF-LXXXXXAPQTCPXXXXXXXXXXXXGEWEGDFFPGIPKIKYEGP 303
           M   ++   LLC NV        +PQTCP             EWEG+FFPGIPKIKYEGP
Sbjct: 1   MMAGKVFLFLLCLNVVSFAVIASSPQTCPADDVSSKCGASD-EWEGEFFPGIPKIKYEGP 59

Query: 302 SSKNPLSYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGIQTKFWPWEDGTNSL 123
           SSKNPLSYKWYNA+EEILGKKMKDW+RFSVAFWHTFRGTG DPFG  TKFWPWEDGT+SL
Sbjct: 60  SSKNPLSYKWYNADEEILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSL 119

Query: 122 AMAKRRMKANFEFLNKLGVDYWCFHDRDIAPDGKTLKEAN 3
           AMAKRRM+ANFEF+ KLGVD WCFHDRDIAPDGKTL+EAN
Sbjct: 120 AMAKRRMRANFEFIEKLGVDLWCFHDRDIAPDGKTLEEAN 159


>ref|XP_003549495.1| PREDICTED: xylose isomerase-like [Glycine max]
          Length = 480

 Score =  249 bits (637), Expect = 2e-64
 Identities = 118/162 (72%), Positives = 131/162 (80%)
 Frame = -1

Query: 488 MEKMKVRQILHLLLCSNVFLXXXXXAPQTCPXXXXXXXXXXXXGEWEGDFFPGIPKIKYE 309
           M KMK+ + L LLLC  +F      APQTCP             EW+G+FFP IPKIKYE
Sbjct: 1   MMKMKLVKTLLLLLCVKLFCYAVIGAPQTCPANNEDKCGDSD--EWKGEFFPDIPKIKYE 58

Query: 308 GPSSKNPLSYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGIQTKFWPWEDGTN 129
           GPSSKN LS+KWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFG  TK+W WEDGTN
Sbjct: 59  GPSSKNVLSFKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGAPTKYWLWEDGTN 118

Query: 128 SLAMAKRRMKANFEFLNKLGVDYWCFHDRDIAPDGKTLKEAN 3
           SL MAKRRM+ANFEF++KLGVD+WCFHDRDIAPDGKTL+E+N
Sbjct: 119 SLNMAKRRMRANFEFISKLGVDFWCFHDRDIAPDGKTLEESN 160


>gb|ACU18251.1| unknown [Glycine max]
          Length = 203

 Score =  249 bits (637), Expect = 2e-64
 Identities = 118/162 (72%), Positives = 131/162 (80%)
 Frame = -1

Query: 488 MEKMKVRQILHLLLCSNVFLXXXXXAPQTCPXXXXXXXXXXXXGEWEGDFFPGIPKIKYE 309
           M KMK+ + L LLLC  +F      APQTCP             EW+G+FFP IPKIKYE
Sbjct: 1   MMKMKLVKTLLLLLCVKLFCYAVIGAPQTCPANNEDKCGDSD--EWKGEFFPDIPKIKYE 58

Query: 308 GPSSKNPLSYKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGIQTKFWPWEDGTN 129
           GPSSKN LS+KWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFG  TK+W WEDGTN
Sbjct: 59  GPSSKNVLSFKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGAPTKYWLWEDGTN 118

Query: 128 SLAMAKRRMKANFEFLNKLGVDYWCFHDRDIAPDGKTLKEAN 3
           SL MAKRRM+ANFEF++KLGVD+WCFHDRDIAPDGKTL+E+N
Sbjct: 119 SLNMAKRRMRANFEFISKLGVDFWCFHDRDIAPDGKTLEESN 160


Top