BLASTX nr result

ID: Cimicifuga21_contig00009273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009273
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...    69   5e-10
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    59   4e-07
ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_003633511.1| PREDICTED: putative disease resistance prote...    56   3e-06
emb|CBI29102.3| unnamed protein product [Vitis vinifera]               56   3e-06

>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 906

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +2

Query: 11   PCLSELLVSSCYKLRALAFPEGEEIFRVLRELKIERCPELKKLAGVGKLRSLEDLKLEGL 190
            P L  LLV   Y       P    +   +++LK+ RC   K+L  +GKL SLE L +   
Sbjct: 752  PNLEALLV---YDYGGSILPSWMTLLTKMKDLKLLRCVNCKELPSLGKLPSLEKLLIGHF 808

Query: 191  GSMERLGLEFLGISPVSDHGA-GDSVAIFPQLKSLVLRHMTKWE 319
             +++ + +EFLGI PV+D  +  +SV +FP+LK L  R+M +WE
Sbjct: 809  NNVKCVSVEFLGIDPVTDQNSITESVVLFPKLKELTFRYMVEWE 852


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223542676|gb|EEF44213.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/104 (32%), Positives = 50/104 (48%)
 Frame = +2

Query: 23   ELLVSSCYKLRALAFPEGEEIFRVLRELKIERCPELKKLAGVGKLRSLEDLKLEGLGSME 202
            EL     Y      FP    +   L+ L++  C    +L  +GKL SLE L +    S++
Sbjct: 768  ELEALQVYDYGGSIFPNWITLLTKLKHLRLLSCINCLQLPPLGKLPSLEKLLIGHFNSLK 827

Query: 203  RLGLEFLGISPVSDHGAGDSVAIFPQLKSLVLRHMTKWEEEEKM 334
             +  E LGI PV+D    +S   FP+L  L  R M +WE  E++
Sbjct: 828  SVSAELLGIDPVTDVYCKESFVAFPKLNELTFRFMVEWENWEEI 871


>ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|222837837|gb|EEE76202.1|
           predicted protein [Populus trichocarpa]
          Length = 634

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
 Frame = +2

Query: 5   IMPCLSELLVSSCYKLRALAFP--EGEEIFRVLRELKIERCPELKKLAGVGKLRSLEDLK 178
           + P L EL +     L     P  EG+++F  L +L I++C +L++L  +G L  L+ LK
Sbjct: 105 LFPALKELTLEYMDGLEEWMIPGGEGDQVFPFLEKLSIQQCGKLRQLPTLGCLPRLKILK 164

Query: 179 LEGLGSMERLGLEFLGISPVSDHGAGDSVAIFPQLKSLVLRHMTKWEEEEKMHLIGKDQG 358
           + G+ +++ +G EF  IS       G    +FP LK L L +M   EE           G
Sbjct: 165 MSGINNVKCIGNEFYSIS-------GSPTILFPALKELTLEYMDGLEEWM------VPGG 211

Query: 359 GLATIMPCL 385
            +  + PCL
Sbjct: 212 EVVAVFPCL 220


>ref|XP_003633511.1| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1436

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
 Frame = +2

Query: 5    IMPCLSELLVSSCYK-LRALAFPE--GEEIFRVLRELKIERCPELKKLAGVGKLRSLEDL 175
            + PCL+  L   C K      FP   G+ +F  + +L +  C E   L  +G+L SL+ L
Sbjct: 771  LQPCLN--LNKLCIKWYGGPEFPRWIGDALFSKMVDLSLIDCRECTSLPCLGQLPSLKQL 828

Query: 176  KLEGLGSMERLGLEFLGISPVSDHGAGDSVAIFPQLKSLVLRHMTKWEEEEKMHLIGKDQ 355
            +++G+  ++++G EF G + VS   AG     FP L+SL    M++WE+ E         
Sbjct: 829  RIQGMDGVKKVGAEFYGETRVS---AGK---FFPSLESLHFNRMSEWEQWEDW------S 876

Query: 356  GGLATIMPCLH 388
                ++ PCLH
Sbjct: 877  SSTESLFPCLH 887


>emb|CBI29102.3| unnamed protein product [Vitis vinifera]
          Length = 1021

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
 Frame = +2

Query: 5   IMPCLSELLVSSCYK-LRALAFPE--GEEIFRVLRELKIERCPELKKLAGVGKLRSLEDL 175
           + PCL+  L   C K      FP   G+ +F  + +L +  C E   L  +G+L SL+ L
Sbjct: 442 LQPCLN--LNKLCIKWYGGPEFPRWIGDALFSKMVDLSLIDCRECTSLPCLGQLPSLKQL 499

Query: 176 KLEGLGSMERLGLEFLGISPVSDHGAGDSVAIFPQLKSLVLRHMTKWEEEEKMHLIGKDQ 355
           +++G+  ++++G EF G + VS   AG     FP L+SL    M++WE+ E         
Sbjct: 500 RIQGMDGVKKVGAEFYGETRVS---AGK---FFPSLESLHFNRMSEWEQWEDW------S 547

Query: 356 GGLATIMPCLH 388
               ++ PCLH
Sbjct: 548 SSTESLFPCLH 558


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