BLASTX nr result

ID: Cimicifuga21_contig00009260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009260
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329911.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69
ref|XP_003538725.1| PREDICTED: uncharacterized protein LOC100804...   264   3e-68
ref|XP_002303513.1| predicted protein [Populus trichocarpa] gi|2...   263   4e-68
ref|XP_002265516.2| PREDICTED: uncharacterized protein LOC100257...   259   8e-67
ref|XP_003611279.1| hypothetical protein MTR_5g012220 [Medicago ...   258   2e-66

>ref|XP_002329911.1| predicted protein [Populus trichocarpa] gi|222871148|gb|EEF08279.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  269 bits (687), Expect = 1e-69
 Identities = 160/305 (52%), Positives = 188/305 (61%), Gaps = 8/305 (2%)
 Frame = +2

Query: 56  MATSWVKSLQCKSNALEDVYNPTPKHLNNLLSSSSCRK-SAQSLKDVVDXXXXXXXXXXX 232
           MA  WVKSLQCKS A +DV+NP PKHL   L SSSCRK S++ +KDV+            
Sbjct: 1   MAGGWVKSLQCKSRAFDDVFNPNPKHL---LPSSSCRKTSSKIIKDVI------------ 45

Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRYHSKPTKSNNXXXXXXXXXXXXXXXXXXXLT 412
                                       +   KP   +                    L 
Sbjct: 46  ------------IETKTKKPKPKHHPINQNQQKPKPEHVSTPPTLSRSARNPDPVFPVLA 93

Query: 413 ELPEQHPSHNVVQIIFNTSWSPANSFLGRIEMVFKVHNLPKTVTRFEEYRNIVKSRAG-S 589
           ELPE HPS NVV+IIF+TSWS   SF GRIEM+FKV N P+TVTRFEEYR+IVK+RAG S
Sbjct: 94  ELPEGHPSRNVVEIIFHTSWSN-KSFPGRIEMIFKVQNGPRTVTRFEEYRDIVKTRAGLS 152

Query: 590 GK---EDDGRCVADGNEVMRFYCVGPTAGAVYDLGGLCEF--SSKNRTICTFSGSGRAHE 754
           G    E++ RCVADGNE+MRFYC+GP AG V+D  G+       K   +CTFSGSG AHE
Sbjct: 153 GGTTWEENARCVADGNEMMRFYCLGP-AGGVHDARGVAWVFPGGKGAVVCTFSGSGGAHE 211

Query: 755 SVGVGKGRRAMLVCRVIAGRVCKRLRVES-FSESRVGFDSVSGDNGELFVFDSRAVLPCF 931
           S G G+GRRAMLVCRV+AGRV K++  +S   + RVGFDSVSGDNGEL VFDSRAVLPCF
Sbjct: 212 SAGAGRGRRAMLVCRVVAGRVTKQIGFDSLIDDCRVGFDSVSGDNGELLVFDSRAVLPCF 271

Query: 932 LIIYK 946
           LIIY+
Sbjct: 272 LIIYR 276


>ref|XP_003538725.1| PREDICTED: uncharacterized protein LOC100804686 [Glycine max]
          Length = 285

 Score =  264 bits (674), Expect = 3e-68
 Identities = 159/308 (51%), Positives = 184/308 (59%), Gaps = 11/308 (3%)
 Frame = +2

Query: 56  MATSWVKSLQCKSNALEDVYNPTPKHLNNLLSSSSCRKSAQSLKDVVDXXXXXXXXXXXX 235
           MA+ W+KSLQCKS A +DVY+P  K+L   + SSSCRK+   +KDVV             
Sbjct: 1   MASGWMKSLQCKSRAYQDVYHPNSKYL---IPSSSCRKT---IKDVV------------- 41

Query: 236 XXXXXXXXXXXXXXXXXXXXXXXXXXXRYHS---KPTKSNNXXXXXXXXXXXXXXXXXXX 406
                                      RY S   KP                        
Sbjct: 42  ---VDTTKPRPKPNPKPEKPLQKHPSSRYPSSAAKPDFETTINRSRSVTATRHADPRFPS 98

Query: 407 LTELPEQHPSHNVVQIIFNTSWSPANSFLGRIEMVFKVHNLPKTVTRFEEYRNIVKSRAG 586
           LTEL E HPS NVV+IIF+TSW P   F G +EM+FKVHN P+TV+RFEEYR  VK RAG
Sbjct: 99  LTELTEGHPSRNVVEIIFHTSWGP-KPFSGLVEMIFKVHNGPRTVSRFEEYREAVKVRAG 157

Query: 587 SGK----EDDGRCVADGNEVMRFYCVGPTAGAVYDLGGLCEFS---SKNRTICTFSGSGR 745
           +G     E++ RCVADGNEVMRF+C+GPT+G     GG C  S    K   ICTFSGSG 
Sbjct: 158 TGPAHDYEENARCVADGNEVMRFHCLGPTSGGA-PYGGACALSFPGGKGAAICTFSGSGG 216

Query: 746 AHESVGVGKGRRAMLVCRVIAGRVCKRLR-VESFSESRVGFDSVSGDNGELFVFDSRAVL 922
           AHES G G+GRRAMLVCRVIAGR+ K++  VES  + RVGFDSVSGDNGEL VFDSRAVL
Sbjct: 217 AHESSGGGRGRRAMLVCRVIAGRISKQIGFVESLLDGRVGFDSVSGDNGELLVFDSRAVL 276

Query: 923 PCFLIIYK 946
           PCFLIIYK
Sbjct: 277 PCFLIIYK 284


>ref|XP_002303513.1| predicted protein [Populus trichocarpa] gi|222840945|gb|EEE78492.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  263 bits (673), Expect = 4e-68
 Identities = 155/304 (50%), Positives = 181/304 (59%), Gaps = 7/304 (2%)
 Frame = +2

Query: 56  MATSWVKSLQCKSNALEDVYNPTPKHLNNLLSSSSCRKSAQSL-KDVVDXXXXXXXXXXX 232
           MA+ W+KSLQCKS A +DV+NP PKHL   L SSSCRK++  + KDV+            
Sbjct: 1   MASGWIKSLQCKSRAFDDVFNPNPKHL---LPSSSCRKNSSKMTKDVI------------ 45

Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRYHSKPTKSNNXXXXXXXXXXXXXXXXXXXLT 412
                                           KPT +                     LT
Sbjct: 46  ------------VETKAKRSKPKHHLFNHNQQKPTSNPVSTPPPRSLSTRNTDPVFPALT 93

Query: 413 ELPEQHPSHNVVQIIFNTSWSPANSFLGRIEMVFKVHNLPKTVTRFEEYRNIVKSRA--- 583
           ELP+ HPS NVV IIF+TSWS   SF GRIEM+FKV N P+TVTRFEEYR IVK+RA   
Sbjct: 94  ELPDGHPSRNVVDIIFHTSWSN-KSFPGRIEMIFKVQNGPRTVTRFEEYREIVKTRAELT 152

Query: 584 -GSGKEDDGRCVADGNEVMRFYCVGPTAGAVYDLGGLCEF-SSKNRTICTFSGSGRAHES 757
            G+ +E++ RCVADGNE+MRFYC+GP  G     G    F   K   +CTFSGSG AHES
Sbjct: 153 GGTTREENARCVADGNEMMRFYCLGPAGGVHEARGDAWVFPGGKGARVCTFSGSGGAHES 212

Query: 758 VGVGKGRRAMLVCRVIAGRVCKRLRVES-FSESRVGFDSVSGDNGELFVFDSRAVLPCFL 934
            G G GRRAMLVCRV+AGRV K++ V+S   + RVGFDSVSG NGEL  FDSRAVLPCFL
Sbjct: 213 AGGGIGRRAMLVCRVVAGRVTKQVGVDSLIDDCRVGFDSVSGVNGELMAFDSRAVLPCFL 272

Query: 935 IIYK 946
           IIYK
Sbjct: 273 IIYK 276


>ref|XP_002265516.2| PREDICTED: uncharacterized protein LOC100257409 [Vitis vinifera]
          Length = 286

 Score =  259 bits (662), Expect = 8e-67
 Identities = 134/186 (72%), Positives = 150/186 (80%), Gaps = 6/186 (3%)
 Frame = +2

Query: 407 LTELPEQHPSHNVVQIIFNTSWSPANSFLGRIEMVFKVHNLPKTVTRFEEYRNIVKSRAG 586
           L E+PE HPS NVV+IIF+TSWSP  +F GRIEM+FKV NLP+TVTRFEEYR +VKSRAG
Sbjct: 102 LAEMPEGHPSRNVVEIIFHTSWSP-KAFSGRIEMIFKVQNLPRTVTRFEEYREMVKSRAG 160

Query: 587 SGK---EDDGRCVADGNEVMRFYCVGPTAGAVYDLGGLCEF---SSKNRTICTFSGSGRA 748
           SG    EDD RCVADGNEVMRF+C+GPT+G VYD GG   +     K   ICTFSGSG A
Sbjct: 161 SGGGTWEDDARCVADGNEVMRFHCLGPTSGGVYD-GGAAAWVFPGGKGSAICTFSGSGGA 219

Query: 749 HESVGVGKGRRAMLVCRVIAGRVCKRLRVESFSESRVGFDSVSGDNGELFVFDSRAVLPC 928
           HES G G+GRRAMLVCRVIAGRV K++ ++S  E RVGFDSVSGDNGEL VFD RAVLPC
Sbjct: 220 HESGGGGRGRRAMLVCRVIAGRVSKQIGLDSLLEGRVGFDSVSGDNGELLVFDPRAVLPC 279

Query: 929 FLIIYK 946
           FLIIYK
Sbjct: 280 FLIIYK 285



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 31/48 (64%), Positives = 36/48 (75%)
 Frame = +2

Query: 56  MATSWVKSLQCKSNALEDVYNPTPKHLNNLLSSSSCRKSAQSLKDVVD 199
           MA  WVKSLQCKS A EDVY+P PK   NL+  +SCRK  QSLKDV++
Sbjct: 1   MAAHWVKSLQCKSKAFEDVYHPNPK---NLIPGASCRKGVQSLKDVIE 45


>ref|XP_003611279.1| hypothetical protein MTR_5g012220 [Medicago truncatula]
           gi|355512614|gb|AES94237.1| hypothetical protein
           MTR_5g012220 [Medicago truncatula]
          Length = 290

 Score =  258 bits (658), Expect = 2e-66
 Identities = 157/303 (51%), Positives = 177/303 (58%), Gaps = 6/303 (1%)
 Frame = +2

Query: 56  MATSWVKSLQCKSNALEDVYNPTPKHLNNLLSSSSCRKSAQSLKDVVDXXXXXXXXXXXX 235
           MA  WVKSLQCKS A EDVYNP   +  N + S+SCRKS Q      D            
Sbjct: 1   MAGGWVKSLQCKSKAFEDVYNPNT-NTKNRIQSASCRKSVQ------DIKDVVVETTKPK 53

Query: 236 XXXXXXXXXXXXXXXXXXXXXXXXXXXRYHSKPTKSNNXXXXXXXXXXXXXXXXXXXLTE 415
                                      R  +  T  NN                   LTE
Sbjct: 54  SKKPLQKHHSSRYPTATTDFETTINRSRSTNSTTHRNNIPMPVPSPDPRFSS-----LTE 108

Query: 416 LPEQHPSHNVVQIIFNTSWSPANSFLGRIEMVFKVHNLPKTVTRFEEYRNIVKSRAGS-G 592
           L E HPS NVV+IIF+TSW P   F GR+EM+FKVHN  +TVTRFEEYR  VK+R GS  
Sbjct: 109 LNEGHPSRNVVEIIFHTSWGP-KPFSGRVEMIFKVHNGSRTVTRFEEYRETVKTRPGSRN 167

Query: 593 KEDDGRCVADGNEVMRFYCVGPTAGAVYDLGGLCEFS----SKNRTICTFSGSGRAHESV 760
            E++ RCVADGNEVMRF+C+GPT+G     GG C  S         ICTFSGSG AHES 
Sbjct: 168 HEENARCVADGNEVMRFHCLGPTSGGG-PYGGACVGSFPGGKGTAAICTFSGSGGAHESS 226

Query: 761 GVGKGRRAMLVCRVIAGRVCKRLR-VESFSESRVGFDSVSGDNGELFVFDSRAVLPCFLI 937
           G G+GRRAMLVCRVIAGRV KR+  V+S  + RVGFDSVSGDNGEL VFDSRAVLPCFLI
Sbjct: 227 GGGRGRRAMLVCRVIAGRVSKRVGFVDSLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLI 286

Query: 938 IYK 946
           IY+
Sbjct: 287 IYR 289


Top