BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009257
         (2398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin...   355   4e-95
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]   355   4e-95
ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|2...   353   1e-94
ref|XP_002510776.1| RNA-binding region-containing protein, putat...   346   1e-92
ref|XP_003605647.1| RNA-binding protein [Medicago truncatula] gi...   337   1e-89

>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
            gi|297734754|emb|CBI16988.3| unnamed protein product
            [Vitis vinifera]
          Length = 264

 Score =  355 bits (910), Expect = 4e-95
 Identities = 185/265 (69%), Positives = 207/265 (78%), Gaps = 5/265 (1%)
 Frame = -1

Query: 2164 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRSYFEQFGEILEAVVITDKNTGRSKGYG 1985
            MTPANLA QFGDTTYTKVFVGGLAWETQ+ETM+ YFEQFGEILEAVVITDK TGRSKGYG
Sbjct: 1    MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 1984 FVTFREADAAMRACVDPSPVIDGRRANCNLASMGVQKSRPSTPKHGGGARSFRVMNSFHS 1805
            FVTFRE DAAMRACVD +PVIDGRRANCNLAS+GVQ+S+PSTPKHGGG R+FRVM SF +
Sbjct: 61   FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGG-RNFRVMGSFQT 119

Query: 1804 XXXXXXXXXXXXXXATFPSAATFPHYAIQQGIPYNVYGXXXXXXXXXXXXXXYNVYGGGA 1625
                            FPSAATFPHYAIQQGIPYN+YG              Y+VY GGA
Sbjct: 120  -------GFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVY-GGA 171

Query: 1624 TGQYPMYGS--NGMVTGATAAYYPYLQFGQGNGGTASA--YTTGQGYSLQYPHHLYPYSA 1457
              QYP+YG+   GM+TGA AA+YPYLQFG+G+GG A++  YT+GQGY +QYPHHL  YSA
Sbjct: 172  AAQYPVYGAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYPHHLVQYSA 231

Query: 1456 LNSTGFAP-HYGGPLSLGPTAPTPA 1385
            +NSTG  P HYG P+SL   APTPA
Sbjct: 232  INSTGGYPQHYGAPMSL---APTPA 253


>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
          Length = 269

 Score =  355 bits (910), Expect = 4e-95
 Identities = 185/265 (69%), Positives = 207/265 (78%), Gaps = 5/265 (1%)
 Frame = -1

Query: 2164 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRSYFEQFGEILEAVVITDKNTGRSKGYG 1985
            MTPANLA QFGDTTYTKVFVGGLAWETQ+ETM+ YFEQFGEILEAVVITDK TGRSKGYG
Sbjct: 1    MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 1984 FVTFREADAAMRACVDPSPVIDGRRANCNLASMGVQKSRPSTPKHGGGARSFRVMNSFHS 1805
            FVTFRE DAAMRACVD +PVIDGRRANCNLAS+GVQ+S+PSTPKHGGG R+FRVM SF +
Sbjct: 61   FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGG-RNFRVMGSFQT 119

Query: 1804 XXXXXXXXXXXXXXATFPSAATFPHYAIQQGIPYNVYGXXXXXXXXXXXXXXYNVYGGGA 1625
                            FPSAATFPHYAIQQGIPYN+YG              Y+VY GGA
Sbjct: 120  -------GFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVY-GGA 171

Query: 1624 TGQYPMYGS--NGMVTGATAAYYPYLQFGQGNGGTASA--YTTGQGYSLQYPHHLYPYSA 1457
              QYP+YG+   GM+TGA AA+YPYLQFG+G+GG A++  YT+GQGY +QYPHHL  YSA
Sbjct: 172  AAQYPVYGAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYPHHLVQYSA 231

Query: 1456 LNSTGFAP-HYGGPLSLGPTAPTPA 1385
            +NSTG  P HYG P+SL   APTPA
Sbjct: 232  INSTGGYPQHYGAPMSL---APTPA 253


>ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|222858241|gb|EEE95788.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  353 bits (906), Expect = 1e-94
 Identities = 179/266 (67%), Positives = 204/266 (76%), Gaps = 6/266 (2%)
 Frame = -1

Query: 2164 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRSYFEQFGEILEAVVITDKNTGRSKGYG 1985
            MTP+NLA QFGDTTYTKVFVGGLAWETQ+ETM+ YFEQFGEILEAVVI DK TGRSKGYG
Sbjct: 1    MTPSNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVIADKATGRSKGYG 60

Query: 1984 FVTFREADAAMRACVDPSPVIDGRRANCNLASMGVQKSRPSTPKHGGGARSFRVMNSFHS 1805
            FVTFRE DAAMRACVD SPVIDGRRANCNLAS+GVQ+S+PSTPKHG   R+FRVM+SF +
Sbjct: 61   FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHGAAGRNFRVMSSFQT 120

Query: 1804 XXXXXXXXXXXXXXATFPSAATFPHYAIQQGIPYNVYGXXXXXXXXXXXXXXYNVYGGGA 1625
                            FPSAA+FPHYAIQQGIPYNVYG              YN+Y GGA
Sbjct: 121  -------GFGGGVGTAFPSAASFPHYAIQQGIPYNVYGYSSYSPDYTYPASYYNMY-GGA 172

Query: 1624 TGQYPMYGS--NGMVTGATAAYYPYLQFGQGNGGTASAY--TTGQGYSLQYPHHLYPYSA 1457
            T QYPMYGS   GM+ GA AA+YPYLQFG+G+ G A++Y  T+GQ Y +QYPHHL+ YS+
Sbjct: 173  TAQYPMYGSGHGGMMNGAAAAFYPYLQFGEGSTGGATSYSNTSGQSYGVQYPHHLFQYSS 232

Query: 1456 LNST--GFAPHYGGPLSLGPTAPTPA 1385
            +NST  G+  HYG P+SL PTA  P+
Sbjct: 233  INSTTGGYPQHYGAPMSLAPTAALPS 258


>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
            gi|223551477|gb|EEF52963.1| RNA-binding region-containing
            protein, putative [Ricinus communis]
          Length = 259

 Score =  346 bits (888), Expect = 1e-92
 Identities = 176/260 (67%), Positives = 207/260 (79%), Gaps = 4/260 (1%)
 Frame = -1

Query: 2164 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRSYFEQFGEILEAVVITDKNTGRSKGYG 1985
            MTP+NLA QFGDTTYTKVFVGGLAWETQ++TM+ YFEQFGEILEAVVITDK TGRSKGYG
Sbjct: 1    MTPSNLAGQFGDTTYTKVFVGGLAWETQKDTMKKYFEQFGEILEAVVITDKATGRSKGYG 60

Query: 1984 FVTFREADAAMRACVDPSPVIDGRRANCNLASMGVQKSRPSTPKH-GGGARSFRVMNSFH 1808
            FVTFR+ +AAMRACVD +PVIDGRRANCNLAS+GVQ+S+PSTPKH GGG R+ RV++SF 
Sbjct: 61   FVTFRDPEAAMRACVDSAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGRNLRVISSFQ 120

Query: 1807 SXXXXXXXXXXXXXXATFPSAATFPHYAIQQGIPYNVYGXXXXXXXXXXXXXXYNVYGGG 1628
            +                FPSAA+FPHYAIQQGIPYNVYG              YNVY GG
Sbjct: 121  T-----------GFGTAFPSAASFPHYAIQQGIPYNVYGYSPYSPEYTYPTSYYNVY-GG 168

Query: 1627 ATGQYPMYGS--NGMVTGATAAYYPYLQFGQGNGGTASAYTTGQGYSLQYPHHLYPYSAL 1454
            AT QYPMYG+  +GM++GA AA+YPYLQFG+G+GG A++Y++ Q Y++QYPHHL+ YSA+
Sbjct: 169  ATAQYPMYGTGHSGMMSGAAAAFYPYLQFGEGSGG-ATSYSSSQNYNVQYPHHLFQYSAV 227

Query: 1453 NSTGFAP-HYGGPLSLGPTA 1397
            NSTG  P H+G PLSL PTA
Sbjct: 228  NSTGGYPQHFGAPLSLAPTA 247


>ref|XP_003605647.1| RNA-binding protein [Medicago truncatula] gi|355506702|gb|AES87844.1|
            RNA-binding protein [Medicago truncatula]
          Length = 267

 Score =  337 bits (863), Expect = 1e-89
 Identities = 176/267 (65%), Positives = 200/267 (74%), Gaps = 7/267 (2%)
 Frame = -1

Query: 2164 MTPANLASQFGDTTYTKVFVGGLAWETQRETMRSYFEQFGEILEAVVITDKNTGRSKGYG 1985
            MTP NLA QFGDTTYTKVFVGGLAWETQ+ETM+ YFEQFGEILEAVVITDK TGRSKGYG
Sbjct: 1    MTPINLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYG 60

Query: 1984 FVTFREADAAMRACVDPSPVIDGRRANCNLASMGVQKSRPSTPKHGGGARSFRVMNSFHS 1805
            FVTFRE DAAMRACVD +P+IDGRRANCNLAS+GVQ+S+PSTPKHGGG R+ RVM SF +
Sbjct: 61   FVTFREPDAAMRACVDAAPIIDGRRANCNLASLGVQRSKPSTPKHGGGGRNIRVMGSFQT 120

Query: 1804 XXXXXXXXXXXXXXATFPSAATFPHYAIQQGIPYNVYGXXXXXXXXXXXXXXYNVYGGGA 1625
                          + FPSAATFPHYAIQQGIPYNVYG              Y +Y GGA
Sbjct: 121  --------GFGGVGSAFPSAATFPHYAIQQGIPYNVYGYSSYSPDYSYPTSYYGMY-GGA 171

Query: 1624 TGQYPMYG---SNGMVTG--ATAAYYPYLQFGQGNGG-TASAYTTGQGYSLQYPHHLYPY 1463
            T QYP+YG   + GM+TG  A AAYYPYLQ+G+G GG T   YT+GQGY + YP  ++ Y
Sbjct: 172  TAQYPVYGNGPAGGMMTGGAAAAAYYPYLQYGEGTGGATTGGYTSGQGYGVNYPPQVFQY 231

Query: 1462 SALNST-GFAPHYGGPLSLGPTAPTPA 1385
            S + ST G+A HYG P+SL   AP+PA
Sbjct: 232  SPIASTGGYAQHYGTPISL---APSPA 255