BLASTX nr result

ID: Cimicifuga21_contig00009246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00009246
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   560   e-157
ref|XP_002520726.1| potassium channel regulatory factor, putativ...   552   e-155
ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   541   e-151
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   538   e-150
ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   538   e-150

>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score =  560 bits (1443), Expect = e-157
 Identities = 299/408 (73%), Positives = 321/408 (78%)
 Frame = -1

Query: 1471 MDLLREEVQRKRQALSQEVGGKRFFKRSEIEQKKIQKLREEEKRQLEAKSKSLRDKXXXX 1292
            MDLL++E+ +KRQ+L+QE GGKRFFKRSEIEQ+ IQKLRE+EKR+LEAK+  LR      
Sbjct: 1    MDLLKQELLKKRQSLAQEAGGKRFFKRSEIEQRNIQKLREQEKRELEAKA--LRHNNGTA 58

Query: 1291 XXXXXXXXXXXXXXXXXXXXXXXXXKTPEIQTQEQKIDDMVLPKQEVIRRLRFLKQPITL 1112
                                      +  I T EQKID+MVLPKQEVIRRLRFLKQPITL
Sbjct: 59   SSSTAAAASATSTPSSDAKPDLTSSSSKAI-TDEQKIDEMVLPKQEVIRRLRFLKQPITL 117

Query: 1111 FGEDDDARLDRLKVTLKAGVFEVDSDMTEGQTNDFLRDIAELKKRQKTGILSDRKRKSKX 932
            FGEDD ARLDRLK  LKAG+FEVDSDMTEGQTNDFLRDIAEL+KRQKTGILSDRKRKS  
Sbjct: 118  FGEDDTARLDRLKYVLKAGIFEVDSDMTEGQTNDFLRDIAELRKRQKTGILSDRKRKSPE 177

Query: 931  XXXXXXXXXXXXXXXXXXXXXXXXXXXDYDKDLKRMKANFVELCDEDKILVFFKKLLIEW 752
                                         DKDLKRMKANF ELCDEDKILVFFK+LLIEW
Sbjct: 178  DGVEDGEGGGGDDDLSGDGGSSGVDA---DKDLKRMKANFEELCDEDKILVFFKRLLIEW 234

Query: 751  NEELDDMQDAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVNCCMK 572
            N+EL++ Q+ EKRTAKGKSMVATFKQCARYL PLFKFCRKKVL DDIRQALLVVV CCMK
Sbjct: 235  NQELNEKQEGEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLQDDIRQALLVVVECCMK 294

Query: 571  RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 392
            RDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+K
Sbjct: 295  RDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIK 354

Query: 391  RLMTFCQRRYPAMPSKAVEFNSLANGSDLQSLLAEERKVVASHASEER 248
            RLMTFCQRRYP MPSKAVEFNSLANGSDLQSLLAEER    + ASEER
Sbjct: 355  RLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERFSGGNQASEER 402


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
            gi|223540111|gb|EEF41688.1| potassium channel regulatory
            factor, putative [Ricinus communis]
          Length = 417

 Score =  552 bits (1423), Expect = e-155
 Identities = 289/408 (70%), Positives = 318/408 (77%)
 Frame = -1

Query: 1471 MDLLREEVQRKRQALSQEVGGKRFFKRSEIEQKKIQKLREEEKRQLEAKSKSLRDKXXXX 1292
            MDLL++E+ +KRQ+L+Q+ GGKR FKRSEI+QK+IQKLRE+EK++LEAK+K         
Sbjct: 1    MDLLKQELLKKRQSLAQDTGGKRVFKRSEIQQKEIQKLREQEKQELEAKAKRQSSSTETA 60

Query: 1291 XXXXXXXXXXXXXXXXXXXXXXXXXKTPEIQTQEQKIDDMVLPKQEVIRRLRFLKQPITL 1112
                                      T +  T EQ ID+++LPKQEVIRRLRFLKQPITL
Sbjct: 61   TTTTSTSSTANTPSTTTTTTTSAAATTSKSLTNEQNIDNLILPKQEVIRRLRFLKQPITL 120

Query: 1111 FGEDDDARLDRLKVTLKAGVFEVDSDMTEGQTNDFLRDIAELKKRQKTGILSDRKRKSKX 932
            FGEDDDARLDRLK  LKAG+FEVDSDMTEGQTNDFLRDIAEL+KRQK+GI+S+RKRK + 
Sbjct: 121  FGEDDDARLDRLKHVLKAGIFEVDSDMTEGQTNDFLRDIAELRKRQKSGIVSERKRKDRE 180

Query: 931  XXXXXXXXXXXXXXXXXXXXXXXXXXXDYDKDLKRMKANFVELCDEDKILVFFKKLLIEW 752
                                         DKDLKRMKANF ELCDEDKILVFFK+LLIEW
Sbjct: 181  EGAGEDGEGGEGEREMSGDGDSSGGVDA-DKDLKRMKANFEELCDEDKILVFFKRLLIEW 239

Query: 751  NEELDDMQDAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVNCCMK 572
             +ELD+M +AEKRTAKGKSMVATFKQCARYL PLFKFCRKKVLPDDIRQALLVVV CCMK
Sbjct: 240  KQELDEMAEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMK 299

Query: 571  RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 392
            RDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK
Sbjct: 300  RDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 359

Query: 391  RLMTFCQRRYPAMPSKAVEFNSLANGSDLQSLLAEERKVVASHASEER 248
            RLMTFCQRRYP MPSKAVEFNSLANGSDLQSLLAEER    +  SE R
Sbjct: 360  RLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVHSGNQPSEGR 407


>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
            gi|449491488|ref|XP_004158914.1| PREDICTED:
            pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  541 bits (1395), Expect = e-151
 Identities = 287/401 (71%), Positives = 313/401 (78%), Gaps = 4/401 (0%)
 Frame = -1

Query: 1471 MDLLREEVQRKRQALSQEVGGKRFFKRSEIEQKKIQKLREEEKRQLEAK----SKSLRDK 1304
            MDLL++E+ +KRQAL+ E GGKR FKRSEIEQ++IQ+LRE+EKR+LEAK    S +    
Sbjct: 1    MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 1303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPEIQTQEQKIDDMVLPKQEVIRRLRFLKQ 1124
                                          T +  T EQ ID++VLP+QEVIRRLRFLKQ
Sbjct: 61   AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 1123 PITLFGEDDDARLDRLKVTLKAGVFEVDSDMTEGQTNDFLRDIAELKKRQKTGILSDRKR 944
            PITLFGEDDDARLDRLK  LKAG+FEVDSD+TEGQTNDFLRDIAEL+KRQKTGILS+RKR
Sbjct: 121  PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 943  KSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYDKDLKRMKANFVELCDEDKILVFFKKL 764
            + K                              DKDLKRMKANF ELC+EDKILVFFK+L
Sbjct: 181  QKKEDGAGEEGDGGGADEESADGGSSGVET---DKDLKRMKANFDELCEEDKILVFFKRL 237

Query: 763  LIEWNEELDDMQDAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVN 584
            L EW +ELD+M +AEKRTAKGKSMVATFKQCARYL PLFKFCRKKVLPDDIRQALLVVV 
Sbjct: 238  LNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 297

Query: 583  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 404
            CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL
Sbjct: 298  CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 357

Query: 403  QSVKRLMTFCQRRYPAMPSKAVEFNSLANGSDLQSLLAEER 281
            QS+KRLMTFCQRRYP MPSKAVEFNSLANGSDLQSLLAEER
Sbjct: 358  QSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER 398


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score =  538 bits (1387), Expect = e-150
 Identities = 286/408 (70%), Positives = 315/408 (77%)
 Frame = -1

Query: 1471 MDLLREEVQRKRQALSQEVGGKRFFKRSEIEQKKIQKLREEEKRQLEAKSKSLRDKXXXX 1292
            MDLL++E+ +KRQ+L+Q+ GGK+FFKRSEI+QK+IQKLR++EKR+LEAKS     K    
Sbjct: 1    MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLRQQEKRELEAKSL----KRLAT 56

Query: 1291 XXXXXXXXXXXXXXXXXXXXXXXXXKTPEIQTQEQKIDDMVLPKQEVIRRLRFLKQPITL 1112
                                      +  + T EQ ID++VLPK EVIRRLRFLKQP+TL
Sbjct: 57   SSDTAATAPSSSSTASSSASSTIASASASL-TDEQNIDNLVLPKPEVIRRLRFLKQPVTL 115

Query: 1111 FGEDDDARLDRLKVTLKAGVFEVDSDMTEGQTNDFLRDIAELKKRQKTGILSDRKRKSKX 932
            FGEDDDARLDRLK  LKAGVFEVDSDMTEGQTNDFLRDIAEL+KRQKTGIL +RKR+   
Sbjct: 116  FGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKAD 175

Query: 931  XXXXXXXXXXXXXXXXXXXXXXXXXXXDYDKDLKRMKANFVELCDEDKILVFFKKLLIEW 752
                                         DKDLKRMKANF ELCDEDKILVFFKKLL EW
Sbjct: 176  DGAAQDREGGAGDDDLSDCGSSEGAEA--DKDLKRMKANFEELCDEDKILVFFKKLLNEW 233

Query: 751  NEELDDMQDAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVNCCMK 572
             +EL +M +AEKRTAKGKSMVATFKQCARYL PLFKFCRKKVLPDDIRQALL++V CCMK
Sbjct: 234  KQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMK 293

Query: 571  RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 392
            RDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK
Sbjct: 294  RDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 353

Query: 391  RLMTFCQRRYPAMPSKAVEFNSLANGSDLQSLLAEERKVVASHASEER 248
            RLMTFCQRRYP +PSKAVEFNSLANGSDL SLLAEER    + ASEER
Sbjct: 354  RLMTFCQRRYPTLPSKAVEFNSLANGSDLHSLLAEERFSGGNQASEER 401


>ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 413

 Score =  538 bits (1385), Expect = e-150
 Identities = 284/410 (69%), Positives = 314/410 (76%)
 Frame = -1

Query: 1471 MDLLREEVQRKRQALSQEVGGKRFFKRSEIEQKKIQKLREEEKRQLEAKSKSLRDKXXXX 1292
            MDLL++E+ +KRQ+L+Q+ GGK+FFKRSEI+QK+IQKLRE+EKR+LEAKS+    K    
Sbjct: 1    MDLLKQELLKKRQSLAQDTGGKKFFKRSEIQQKEIQKLREQEKRELEAKSQ----KRLAT 56

Query: 1291 XXXXXXXXXXXXXXXXXXXXXXXXXKTPEIQTQEQKIDDMVLPKQEVIRRLRFLKQPITL 1112
                                      +    T EQ ID++VLPK EVIRRLRFLKQP+TL
Sbjct: 57   SSDNAATAPSSSSTASASASSTIASSSAASLTNEQNIDNLVLPKPEVIRRLRFLKQPVTL 116

Query: 1111 FGEDDDARLDRLKVTLKAGVFEVDSDMTEGQTNDFLRDIAELKKRQKTGILSDRKRKSKX 932
            FGEDDDARLDRLK  LKAGVFEVDSDMTEGQTNDFLRDIAEL+KRQKTGIL +RKR+   
Sbjct: 117  FGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKAD 176

Query: 931  XXXXXXXXXXXXXXXXXXXXXXXXXXXDYDKDLKRMKANFVELCDEDKILVFFKKLLIEW 752
                                         DKDLKRMKANF ELCDEDKILVFFKKLL EW
Sbjct: 177  DGAAEDREGGAGDDDLSDCGGSDGADA--DKDLKRMKANFEELCDEDKILVFFKKLLNEW 234

Query: 751  NEELDDMQDAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVNCCMK 572
             +EL +M +AEKRTAKGKSMVATFKQCARYL PLFKFCRKKVLPDDIRQALL++V CCM+
Sbjct: 235  KQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMR 294

Query: 571  RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 392
            RDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK
Sbjct: 295  RDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVK 354

Query: 391  RLMTFCQRRYPAMPSKAVEFNSLANGSDLQSLLAEERKVVASHASEERSL 242
            RLMTFCQRRYP +PSKAVEFNSLANGSDL SLLAEER    + A+ E  L
Sbjct: 355  RLMTFCQRRYPTLPSKAVEFNSLANGSDLHSLLAEERFSGGNQAASEERL 404


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